On the communication of scientific data: The Full-Metadata Format

In this paper, we introduce a scientific format for text-based data files, which facilitates storing and communicating tabular data sets. The so-called Full-Metadata Format builds on the widely used INI-standard and is based on four principles: readable self-documentation, flexible structure, fail-safe compatibility, and searchability. As a consequence, all metadata required to interpret the tabular data are stored in the same file, allowing for the automated generation of publication-ready tables and graphs and the semantic searchability of data file collections. The Full-Metadata Format is introduced on the basis of three comprehensive examples. The complete format and syntax are given in the appendix.     

Coupling of scales in a multiscale simulation using neural networks

Multiscale approaches require the coupling of models on different spatial scales. In this paper, a coupling using neural networks is proposed. Based on a set of mesoscale simulations of concrete a system of neural networks is trained to approximate the response. A macroscale constitutive model is obtained by homogenizing the mesoscale response. Special focus is put on the mesh sensitivity, since the mesoscale model includes softening and consequently the width of the localization zone compared to the dimension of the mesoscale model is an additional parameter in the model.     

Reduced order optimization for model predictive control using principal control moves

In order to reduce the computational complexity of model predictive control (MPC) a proper input signal parametrization is proposed in this paper which significantly reduces the number of decision variables. This parametrization can be based on either measured data from closed-loop operation or simulation data. The snapshots of representative time domain data for all manipulated variables are projected on an orthonormal basis by a Karhunen-Loeve transformation. These significant features (termed principal control moves, PCM) can be reduced utilizing an analytic criterion for performance degradation. Furthermore, a stability analysis of the proposed method is given. Considerations on the identification of the PCM are made and another criterion is given for a sufficient selection of PCM. It is shown by an example of an industrial drying process that a strong reduction in the order of the optimization is possible while retaining a high performance level.     

Optimization of bistable viscoelastic systems

We consider the flow of a viscoelastic fluid in a symmetric cross geometry. For small driving pressures the flow is symmetric, but beyond a certain critical pressure the symmetric flow becomes unstable; two stable asymmetric solutions appear, and forcing of the unstable symmetric flow beyond the critical pressure gives rise to increased hydraulic resistance. We have combined a state-of-the-art implementation for viscoelastic flow modeling with topology optimization in a high level finite element package (COMSOL). We use this framework on the cross geometry with the aim to reduce the critical driving pressure corresponding to the point of bistability, such that the effect is enhanced. The point of bistability is, however, not explicitly contained in the solution, so we opt for a heuristic approach based on the dissipation ratio between the asymmetric and unstable symmetric flow solutions. We find a design that significantly reduces the driving pressure required for bistability, and furthermore is in agreement with the approach followed by experimental researchers. Furthermore, by comparing the two asymmetric solutions, we succesfully apply the same approach to a problem with two fluids meeting in the cross.     

TimeLapseAnalyzer: multi-target analysis for live-cell imaging and time-lapse microscopy

The direct observation of cells over time using time-lapse microscopy can provide deep insights into many important biological processes. Reliable analyses of motility, proliferation, invasive potential or mortality of cells are essential to many studies involving live cell imaging and can aid in biomarker discovery and diagnostic decisions. Given the vast amount of image- and time-series data produced by modern microscopes, automated analysis is a key feature to capitalize the potential of time-lapse imaging devices. To provide fast and reproducible analyses of multiple aspects of cell behaviour, we developed TimeLapseAnalyzer. Apart from general purpose image enhancements and segmentation procedures, this extensible, self-contained, modular cross-platform package provides dedicated modalities for fast and reliable analysis of multi-target cell tracking, scratch wound healing analysis, cell counting and tube formation analysis in high throughput screening of live-cell experiments. TimeLapseAnalyzer is freely available (MATLAB, Open Source) at http://www.informatik.uni-ulm.de/ni/mitarbeiter/HKestler/tla.     

Formalizing process-based risk with Value-Focused Process Engineering

Following calls to advance the integration of risk and business process modeling paradigms, this paper formalizes the process of incorporating risk into business process models through the principles of Value-Focused Process Engineering (VFPE). In doing so, the paper aims to extend the existing VFPE modeling notation to reflect a set of necessary constructs required to adequately represent risk in goal-oriented business-process models. The extended set of constructs is proposed to support a formal systems view of process-based risk. Process-based risk is formalized on the one hand, as a product of complex interactions between activity-based elements, and on the other hand, as a natural component of the value creation mechanism of an elementary function or a complex process. The proposed risk-aware VFPE formalism also formulates rules for decomposing risk in process models according to the organizational values, thereby enabling better risk visibility, reducing process complexity, and ensuring continuity of business processes.     

Differential graphical games for H∞ control of linear heterogeneous multiagent systems

Differential graphical games have been introduced in the literature to solve state synchronization problem for linear homogeneous agents. When the agents are heterogeneous, the previous notion of graphical games cannot be used anymore and a new definition is required. In this paper, we define a novel concept of differential graphical games for linear heterogeneous agents subject to external unmodeled disturbances, which contain the previously introduced graphical game for homogeneous agents as a special case. Using our new formulation, we can solve both the output regulation and H_∞ output regulation problems. Our graphical game framework yields coupled Hamilton‐Jacobi‐Bellman equations, which are, in general, impossible to solve analytically. Therefore, we propose a new actor‐critic algorithm to solve these coupled equations numerically in real time. Moreover, we find an explicit upper bound for the overall ‐gain of the output synchronization error with respect to disturbance. We demonstrate our developments by a simulation example.     

An Extended Replication of an Experiment for Assessing Methods for Software Requirements Inspections

We have performed an extended replication of the Porter-Votta-Basili experiment comparing the Scenario method and the Checklist method for inspecting requirements specifications using identical instruments. The experiment has been conducted in our educational context represented by a more general definition of a defect compared to the original defect list. Our study involving 24 undergraduate students manipulated three independent variables: detection method, requirements specification, and the order of the inspections. The dependent variable measured is the defect detection rate. We found the requirements specification inspected and not the detection method to be the most probable explanation for the variance in defect detection rate. This suggests that it is important to gather knowledge of how a requirements specification can convey an understandable view of the product and to adapt inspection methods accordingly. Contrary to the original experiment, we can not significantly support the superiority of the Scenario method. This is in accordance with a replication conducted by Fusaro, Lanubile and Visaggio, and might be explained by the lack of individual defect detection skill of our less experienced subjects.