Comparison of different primer sets for the RT-PCR detection of hepatitis A virus and astrovirus in mussel tissues.

In the present study, the efficiency of several primer sets for the RT-PCR detection of hepatitis A virus (HAV) and astrovirus from both crude viral extracts and experimentally infected shellfish tissues was evaluated. Differences were observed depending on the primer set employed in the sensitivity of amplification of both viral types. For HAV primers, HAV240/HAV68 yielded the higher sensitivity: showing a detection limit of 0.02-0.1 infectious particles/microL or mg of tissue (either crude extracts or seeded mussel tissues). Regarding detection of AsV, a better performance was observed with primer set A1/A2 achieving a sensitivity of 0.1-1 PFU/microL or mg of tissue. The results obtained in this work strongly indicated that selection of primer sets to be employed for the routine detection of enteric viruses was a critical point in the design of the RT-PCR protocols.     

The FML (Fucose Mannose Ligand) of Leishmania donovani. a new tool in diagnosis, prognosis, transfusional control and vaccination against human kala-azar

Upon fractionation of a post mitochondrial supernatant from rat liver, phosphorylase kinase activity was largely recovered in the cytosol and the smooth endoplasmic reticulum (SER) fraction. The presence of phosphorylase kinase in SER vesicles was not due to an interaction of the enzyme with glycogen particles, since previous elimination of SER glycogen either by 48 h animal starvation or by treatment of the membrane fraction with alpha-amylase did not significantly alter phosphorylase kinase activity content. Washing of the initial pellet of SER fraction (crude SER) by dilution and recentrifugation, released in the supernatant an amount of phosphorylase kinase activity, which is dependent on: i) the degree of dilution, ii) the number of washes, iii) the ionic strength of the washing solution and iii) the presence or absence of Ca2+. Crude SER-associated phosphorylase kinase was marginally affected by increased concentrations of antibody against rabbit skeletal muscle holoenzyme which nevertheless drastically inhibited cytosolic enzyme activity, while it showed a higher resistance to partial proteolysis and a different Western blotting profile with anti-phosphorylase kinase when compared with the soluble kinase. A small but significant fraction of SER phosphorylase kinase was strongly associated with the microsomal fraction being partly extractable only in presence of detergents. This membrane-bound enzyme form exhibited an alkaline pH optimum, in contrast to the neutral pH optima of both soluble and weakly associated phosphorylase kinase.     

Residues of bioenergy production chains as soil amendments: immediate and temporal phytotoxicity

The current shift towards bioenergy production increases streams of bioenergy rest-products (RPs), which are likely to end-up as soil amendments. However, their impact on soil remains unclear. In this study we evaluated crop phytotoxicity of 15 RPs from common bioenergy chains (biogas, biodiesel, bioethanol and pyrolysis). The RPs were mixed into a sandy soil and the seedling root and shoot elongation of lettuce (Lactuca sativa L.), radish (Raphanus sativus L.), and wheat (Triticum aestivum L.) were measured. Immediate phytotoxic effects were observed with biodiesel and bioethanol RPs (root elongation reduced to 14-60% for the three crops; P<0.05). However, phytotoxicity was no longer significant after seven days. Digestates had no phytotoxic effect whereas biochars ranged from beneficial to detrimental depending on the original feedstock and temperature of pyrolysis. Biochar amendment alleviated phytotoxicity of bioethanol by-products for wheat and radish. Phytotoxicity assessment is critical for successful soil amendment with bioenergy RPs.     

Phase coherence imaging of grained materials

Ultrasound detection and evaluation of flaws in materials showing structural noise (austenitic steels, titanium alloys, composites, etc.) is difficult because of the low flaw-to-grain noise ratio. Much research has been performed looking for methods to improve flaw detection in grained materials. Many approaches require a cumbersome tuning process to select the correct parameter values or to use iterative techniques. In this work, the technique of phase coherence imaging is proposed to improve the flaw-to-grain noise ratio. The technique weights the output of a conventional beamformer with a coherence factor obtained from the aperture data phase dispersion. It can be simply implemented in real-time and it operates automatically, without needing any parameter adjustment. This paper presents the theoretical basis of phase coherence imaging to reduce grain noise, as well as experimental results that confirm the expected performance.     

Assessment of DNA damage in coal open-cast mining workers using the cytokinesis-blocked micronucleus test and the comet assay

Coal mining is one of the most important causes of environmental pollution, as large quantities of coal dust particles are emitted. Colombia-South America has large natural coal reserves and “El Cerrejón” is the world's largest open-cast mine located in the northern department of Guajira. The aim of the present study was to evaluate genotoxic effects in a population exposed to coal residues from the open-cast mine “El Cerrejón”. 100 exposed workers and 100 non-exposed control individuals were included in this study. The exposed group was divided according to different mining area activities: (i). Transport of extracted coal, (ii). Equipment field maintenance, (iii). Coal stripping and, (iv). Coal embarking. Blood samples were taken to investigate biomarkers of genotoxicity, specifically, primary DNA damage as damage index (DI), tail length and% of tail DNA using the Comet assay (alkaline version) and chromosome damage as micronucleus (MN) frequency in lymphocytes. Both biomarkers showed statistically significantly higher values in the exposed group compared to the non-exposed control group. No difference was observed between the exposed groups executing different mining activities. These results indicate that exposure to coal mining residues may result in an increased genotoxic exposure in coal mining workers. We did not find a correlation between age, alcohol consumption and service time with the biomarkers of genotoxicity. Our results are the first data of genotoxic effects induced by coal mining exposure in Colombia, and thus, contribute to the exploration of test batteries use for monitoring of exposed populations and may stimulate designing control, hygiene and prevention strategies for occupational health risk assessment in developing countries.     

Potable water recovery from As, U, and F contaminated ground waters by direct contact membrane distillation process

In this study, the feasibility of the direct contact membrane distillation (DCMD) process to recover arsenic, uranium and fluoride contaminated saline ground waters was investigated. Two types of membranes (polypropylene, PP; and polytetrafluoroethylene, PTFE) were tested to compare the permeate production rates and contaminant removal efficiencies. Several experiments were conducted to study the effect of salts, arsenic, fluoride and uranium concentrations (synthetic brackish water with salts: 1000-10,000 ppm; arsenic and uranium: 10-400 ppb; fluoride: 1-30 ppm) on the desalination efficiency. The effect of process variables such as feed flow rate, feed temperature and pore size was studied. The experimental results proved that the DCMD process is able to achieve over 99% rejection of the salts, arsenic, fluoride and uranium contaminants and produced a high quality permeate suitable for many beneficial uses. The ability to utilize the low grade heat sources makes the DCMD process a viable option to recover potable water from a variety of impaired ground waters.     

Effects of Lysine and Methionine Fortification on Dough and Bread Characteristics

Wheat flour from the Hermosillo Hard Red Spring cultivar in Sonora, Mexico was fortified with various levels of lysine and methionine. The effects of added amino acids on the rheological properties were measured by the Brabender Farinograph and the Chopin Alveograph. Nutritional characteristics were measured by Protein Efficiency Ratio (PER). Dough development and stability times were not significantly different between control and fortified flours. Water absorption and Alveograph results indicated differences between samples. PERs were significantly improved by fortification. Overall bread acceptability was not significantly different from unfortified samples.