Citation Counts of Multi-Authored Papers — First-named Authors and Further Authors

To examine whether primary-citation indexing can be taken as an unbiased representation of all-author indexing, we compared the cited first-author counts (straight counts) with the cited all-author counts (complete counts)in two psychological journals over two publication years. Although rather high correlations were found between straight counts and complete counts, correlations differ with journals of the same discipline, with different publication years of the same journal, and according to seniority of cited authors. No effect of alphabetical name ordering was found. Results are discussed against the background of the possible use of weighting procedures for all-author indexing. This revised version was published online in June 2006 with corrections to the Cover Date.     

Preliminary assessment of biodiesel generation from meat industry residues in Baja California, Mexico

Oil derived fuels constituted a main energy source during the last fifty years, although their high price limited their accessibility. Prospective studies indicated that economic and environmental problems promoted biodiesel production using biomass and residues like animal fat, along with meat and bones, among others. The regional inventory of the available fat in meat industry, as well as the estimation of the biodiesel potential production demonstrated that the biodiesel generated from animal fat, combined with diesel from oil in a 2% biodiesel blend could power 25% of the trucks and passenger vehicles registered in 2007 in Baja California, Mexico.     

Integrative computational approach to evaluate risk genes for postmenopausal osteoporosis

In recent years, numerous studies reported over a hundred of genes playing roles in the etiology of postmenopausal osteoporosis (PO). However, many of these candidate genes were lack of replication and results were not always consistent. Here, the authors proposed a computational workflow to curate and evaluate PO related genes. They integrate large‐scale literature knowledge data and gene expression data (PO case/control: 10/10) for the marker evaluation. Pathway enrichment, sub‐network enrichment, and gene–gene interaction analysis were conducted to study the pathogenic profile of the candidate genes, with four metrics proposed and validated for each gene. By using the authors'' approach, a scalable PO genetic database was developed; including PO related genes, diseases, pathways, and the supporting references. The PO case/control classification supported the effectiveness of the four proposed metrics, which successfully identified eight well‐studied top PO genes (e.g. TGFB1, IL6, IL1B, TNF, ESR2, IGF1, HIF1A, and COL1A1) and highlighted one recently reported PO genes (e.g. IFNG). The computational biology approach and the PO database developed in this study provide a valuable resource which may facilitate understanding the genetic profile of PO.Inspec keywords: biology computing, genetics, diseases, boneOther keywords: risk genes, postmenopausal osteoporosis, integrative computational approach, gene expression data, gene‐gene interaction analysis, IL1B, TNF, ESR2, HIF1A, COL1A1, PO genes     

Interactions between disciplines and countries in methodical preferences for empirical research

Scientific results of empirical research depend on the methods used. The selection of empirical methods by scientists is not solely determined by the subject of research or by theory. Social and historical (in our investigation national) conditions also affect the application of methods. This hypothesis has been corroborated with the help of journals in psychology, psychiatry, and sociology from different countries. The national impact on method preference varies among these disciplines. Conclusions are drawn concerning the generalizability of empirical results beyond disciplines and beyond countries.     

菲亚特展示最新工程机械解决方案

正著名动力总成系统制造商菲亚特动力科技(FPT Industrial)因创新的解决方案而闻名,该公司一直专注于未来技术的开发,以确保发动机最低的排放水平和最高的生产力,此次参展也展示其最新的工程机械解决方案。R22型发动机拓宽低排量产品范围展会期间,菲亚特展示了其与长期     

Exploiting ELIOT for Scaffold-Repurposing Opportunities: TRIM33 a Possible Novel E3 Ligase to Expand the Toolbox for PROTAC Design

The field of targeted protein degradation, through the control of the ubiquitin–proteasome system (UPS), is progressing considerably; to exploit this new therapeutic modality, the proteolysis targeting chimera (PROTAC) technology was born. The opportunity to use PROTACs engaging of new E3 ligases that can hijack and control the UPS system could greatly extend the applicability of degrading molecules. To this end, here we show a potential application of the ELIOT (E3 LIgase pocketOme navigaTor) platform, previously published by this group, for a scaffold-repurposing strategy to identify new ligands for a novel E3 ligase, such as TRIM33. Starting from ELIOT, a case study of the cross-relationship using GRID Molecular Interaction Field (MIF) similarities between TRIM24 and TRIM33 binding sites was selected. Based on the assumption that similar pockets could bind similar ligands and considering that TRIM24 has 12 known co-crystalised ligands, we applied a scaffold-repurposing strategy for the identification of TRIM33 ligands exploiting the scaffold of TRIM24 ligands. We performed a deeper computational analysis to identify pocket similarities and differences, followed by docking and water analysis; selected ligands were synthesised and subsequently tested against TRIM33 via HTRF binding assay, and we obtained the first-ever X-ray crystallographic complexes of TRIM33α with three of the selected compounds.     

Influence of Different Salts on the G-Quadruplex Structure Formed from the Reversed Human Telomeric DNA Sequence

G-rich telomeric DNA plays a major role in the stabilization of chromosomes and can fold into a plethora of different G-quadruplex structures in the presence of mono- and divalent cations. The reversed human telomeric DNA sequence (5′-(GGG ATT)₄; RevHumTel) was previously shown to have interesting properties that can be exploited for chemical sensing and as a chemical switch in DNA nanotechnology. Here, we analyze the specific G-quadruplex structures formed by RevHumTel in the presence of K⁺, Na⁺, Mg²⁺ and Ca²⁺ cations using circular dichroism spectroscopy (CDS) and Förster resonance energy transfer (FRET) based on fluorescence lifetimes. CDS is able to reveal strand and loop orientations, whereas FRET gives information about the distances between the 5′-end and the 3′-end, and also, the number of G-quadruplex species formed. Based on this combined information we derived specific G-quadruplex structures formed from RevHumTel, i.e., a chair-type and a hybrid-type G-quadruplex structure formed in presence of K⁺, whereas Na⁺ induces the formation of up to three different G-quadruplexes (a basket-type, a propeller-type and a hybrid-type structure). In the presence of Mg²⁺ and Ca²⁺ two different parallel G-quadruplexes are formed (one of which is a propeller-type structure). This study will support the fundamental understanding of the G-quadruplex formation in different environments and a rational design of G-quadruplex-based applications in sensing and nanotechnology.