Occurrence,horizontal transfer and degeneration of VDE intein family in Saccharomycete yeasts

VDE is a homing endonuclease gene originally discovered as an intervening element in VMA1s of Saccharomyces cerevisiae. There have been two independent subfamilies of VDE, one from S. cerevisiae strain X2180-1A and the other from Saccharomyces sp. DH1-1A in the host VMA1 gene, and they share the identity of 96.3%. In order to search the occurrence, intra/interspecies transfer and molecular degeneration of VDE, complete sequences of VMA1 in 10 strains of S. cerevisiae, eight species of saccharomycete yeasts, Candida glabrata and Kluyveromyces lactis were determined. We found that six of 10 S. cerevisiae strains contain VDEs 99.7-100% identical to that of the strain X2180-1A, one has no VDE, whereas the other three harbour VDEs 100% identical to that of the strain DH1-1A. S. carlsbergensis has two VMA1s, one being 99.8% identical to that of the strain X2180-1A with VDE 100% identical to that of the strain DH1-1A and the other containing the same VMA1 in S. pastorianus with no VDE. This and other evidence indicates that intra/interspecies transmissions of VDEs have occurred among saccharomycete yeasts. Phylogenetic analyses of VMA1 and VDE suggest that the S. cerevisiae VDEs had branched earlier than other VDEs from an ancestral VDE and had invaded into the host loci as relatively late events. The two VDEs seemed to degenerate in individual host loci, retaining their splicing capacity intact. The degeneration of the endonuclease domains was distinct and, if compared, its apparent rate was much faster than that of the protein-splicing domains.     

Analysis of the current distortion factor of a three‐phase,three‐wire system

In a balanced three‐phase system, the three‐phase current distortion factor of three‐phase ac power sources has been expressed by applying the conventional single‐phase current distortion factor, which is defined for a single‐phase system. However, in an unbalanced three‐phase system, it is difficult to express the three‐phase current distortion factor for distorted three‐phase ac currents by means of the conventional single‐phase current distortion factor. For instance, the conventional current distortion factors for three‐phase ac currents are usually different from each other in the unbalanced three‐phase system. To solve the above problem, this paper proposes a novel definition of the three‐phase current distortion factor. The proposed three‐phase current distortion factor is quite effective for the unbalanced three‐phase system as well as the balanced three‐phase system. © 2000 Scripta Technica, Electr Eng Jpn, 131(4): 1–10, 2000     

Models for circular data from time series spectra

Circular data are those for which the natural support is the unit circle and its toroidal extensions. Numerous constructions have been proposed which can be used to generate models for such data. We propose a new, very general, one based on the normalization of the spectra of complex-valued stationary processes. As illustrations of the new construction's application, we study models for univariate circular data obtained from the spectra of autoregressive moving average models and relate them to existing models in the literature. We also propose and investigate multivariate circular models obtained from the high-order spectra of stationary stochastic processes generated using linear filtering with an autoregressive moving average response function. A new family of distributions for a Markov process on the circle is also introduced. Results for asymptotically optimal inference for dependent observations on the circle are presented which provide a new paradigm for inference with circular models. The application of one of the new families of spectra-generated models is illustrated in an analysis of wind direction data.     

Effects of Seismically Induced Pounding at Expansion Joints of Concrete Bridges

This paper presents the result of a study on the effect of pounding at expansion joints on concrete bridge response to earthquake ground motions. An engineering approach, rather than continuum mechanics approach, is emphasized. First, the dynamic behavior of a damped multidegree-of-freedom bridge system separated by an expansion joint involving an impact is examined by means of the finite element method. Second, the sensitivity analysis of the stiffness in gap elements is performed. Third, usefulness of the analysis method for simulation of pounding phenomena is demonstrated and the effect of pounding on the ductility demands measured in terms of the rotation of column ends is investigated. Two-dimensional finite element analysis using a bilinear hysterestic model for bridge substructure joints and a nonlinear gap element for the expansion joint is performed on a realistic bridge with an expansion joint. The effects of the primary factors on the ductility demand such as gap sizes and characteristics of earthquake ground motion are investigated through a parametric study. The major conclusions are (1) the effect of impact most directly depends on the size of momentum (or pounding magnitude); and (2) the pounding effect is generally found to be negligible on the ductility demand for wide practical ranges of gap size and peak ground acceleration, but is potentially significant at the locations of impact.     

EFFECT OF INTERMITTENT HEATING ON DRYING-INDUCED STRAIN-STRESS OF MOLDED CLAY

ABSTRACT

Parametric analyses of the strain-stress in the drying process are performed to study the influence of the intermittent drying on the behaviors of drying-induced strain-stress and deformation as well as the drying characteristic. The transient three-dimensional problem of strain-stress and heat and moisture transfer in a slab is solved simultaneously by the finite element method. The dimensionless parameters are introduced to generalize the problem in the conservation equations of heat and moisture transfer. The intermittent drying is modeled by applying periodically smaller and larger Biot numbers to the boundary conditions. The maximum tensile and compressive stresses fluctuate, and fall remarkably during the smaller Biot number period when a slab is heated intermittently. The peak stress of the fluctuation exceeds beyond the case in the continuous healing where the overall drying rate is almost equivalent to that in the intermittent beating, but the reduction of the stresses takes place rapidly in the low heating period.     

R & D Needs - Drying of Ceramics

ABSTRACT

New research and development needs for the drying of ceramics are prooosed. The researches on the ceramic drying are briefly reviewed and the role of the drying in the ceramic production process iS summarized. The drying must deal with molded materials and the problem is of significant difference from another drying with particulate materials. It means that the drying must be performed with keeping the molded feature and the insufficient completion of drying and the careless operation influence directly on the product quality The importnance of the R & D on the heat and moisture transfer. shrinking mechanism. the deformation behavior and the strain-stress formation in the molded clay issuggested. The subjects are also pointed out for the further improvement of the ceramic drying process and the precise design of molding with high quality.     

DRYING OF CLAY AND NONCLAY MEDIA : HEAT AND MASS TRANSFER AND QUALITY ASPECTS

The researches on drying of clay and nonclay media are briefly reviewed and the role of drying in the manufacturing process is summarized. The drying process must be carefully controlled to maintain the desired product configuration. Inefficient completion of drying and poor operation of the dryer influence directly the product quality. The importance of R&D on the heat and moisture transfer phenomena, shrinkage mechanisms, deformation behavior, strain-stress relations and the internal pressure in the media during drying is stressed. Suggestions are given for further improvement of the drying process and improved design of the molding and casting processes for higher product quality     

Control of Oxidation State of Eu Ions in Na2O–Al2O3–SiO2 Glasses

Glasses doped with well‐controlled Eu³⁺ and Eu²⁺ ions have attracted considerable interest due to the possibility of tuning the wavelength range of the emitted light from violet to red by using their ⁵D₀→⁷F_j and 5d–4f electron transitions. Glasses were prepared to dope Eu³⁺ ions in a Na₂O–Al₂O₃–SiO₂ system, and the changes in the valence state of Eu³⁺ ions and the glass structure surrounding the Eu atoms during heating under H₂ atmosphere were investigated using fluorescence spectroscopy, X‐ray absorption fine‐structure spectroscopy, and ²⁷Al magic‐angle spinning solid‐state nuclear magnetic resonance spectroscopy. The reduction behavior of Eu³⁺ ions was dependent on the Al/Na molar ratio of the glass. For Al/Na < 1, the Al³⁺ ions formed the AlO₄ network structure accompanied by the Na⁺ ions as charge compensators; the Eu³⁺ ions occupied the interstitial positions in the SiO₄ network structure and were not reduced even under heating in H₂ gas. On the other hand, in the glasses containing Al₂O₃ with the Al/Na ratio exceeding unity, the Eu³⁺ ions commenced to be coordinated by the AlO₄ units in addition to the SiO₄ network structure. When heated in H₂ gas, H₂ gas molecules reacted with the AlO₄ units surrounding Eu³⁺ ions to form AlO₆ units terminated with OH bonds, and reduced Eu³⁺ ions to Eu²⁺ via the extracted electrons.