Propositionalization-based relational subgroup discovery with RSD

Relational rule learning algorithms are typically designed to construct classification and prediction rules. However, relational rule learning can be adapted also to subgroup discovery. This paper proposes a propositionalization approach to relational subgroup discovery, achieved through appropriately adapting rule learning and first-order feature construction. The proposed approach was successfully applied to standard ILP problems (East-West trains, King-Rook-King chess endgame and mutagenicity prediction) and two real-life problems (analysis of telephone calls and traffic accident analysis). Editors: Hendrik Blockeel, David Jensen and Stefan Kramer An erratum to this article is available at .     

Policy‐based scanning with QoS support for seamless handovers in wireless networks

Supporting seamless handovers between different wireless networks is a challenging issue. One of the most important aspects of a seamless handover is finding a target network and point of attachment (PoA). This is achieved by performing a so‐called channel scanning. In most handovers, such as between universal mobile telecommunications system (UMTS), wireless local area network (WLAN), and worldwide interoperability for microwave access (WiMAX), channel scanning causes severe service disruptions with the current PoA and degrades the quality of service (QoS) during the handover. In this paper, a new architecture for QoS supported scanning that can be generalized to different wireless networks is proposed. It employs two techniques. The first is for determining a policy‐based order for the channel scanning sequence. With this technique, depending on the network costs and user requirements, the policy engine determines the channel scanning order for different network types and sets up a scanning sequence of PoAs for a given network type. This policy‐based scanning order provides a faster discovery of the target PoA that meets the QoS demands of the user. The second technique consists of a QoS supported dynamic scanning algorithm where the scanning frequency and duration are determined based on the user QOS requirements. Most importantly, the scanning duration is scheduled to guarantee the user QoS requirements while the scan progresses. Simulation results show that the proposed mechanism achieves relatively short service disruptions and provides the desired quality to users during the scanning period. Copyright © 2009 John Wiley & Sons, Ltd.     

Adult Renal Stem/Progenitor Cells Can Modulate T Regulatory Cells and Double Negative T Cells

Adult Renal Stem/Progenitor Cells (ARPCs) have been recently identified in the human kidney and several studies show their active role in kidney repair processes during acute or chronic injury. However, little is known about their immunomodulatory properties and their capacity to regulate specific T cell subpopulations. We co-cultured ARPCs activated by triggering Toll-Like Receptor 2 (TLR2) with human peripheral blood mononuclear cells for 5 days and 15 days and studied their immunomodulatory capacity on T cell subpopulations. We found that activated-ARPCs were able to decrease T cell proliferation but did not affect CD8⁺ and CD4⁺ T cells. Instead, Tregs and CD3⁺ CD4^- CD8^- double-negative (DN) T cells decreased after 5 days and increased after 15 days of co-culture. In addition, we found that PAI1, MCP1, GM-CSF, and CXCL1 were significantly expressed by TLR2-activated ARPCs alone and were up-regulated in T cells co-cultured with activated ARPCs. The exogenous cocktail of cytokines was able to reproduce the immunomodulatory effects of the co-culture with activated ARPCs. These data showed that ARPCs can regulate immune response by inducing Tregs and DN T cells cell modulation, which are involved in the balance between immune tolerance and autoimmunity.     

High Virus Removal by Self‐Organized Nanostructured 2D Liquid‐Crystalline Smectic Membranes for Water Treatment

To obtain high quality of drinking water free from biocontaminants is especially important issue. A new strategy employing smectic liquid‐crystalline ionic membranes exhibiting 2D structures of layered nanochannels for water treatment is proposed for efficient virus removal and sufficient water flux. The smectic A (SmA) liquid‐crystalline membranes obtained by in situ polymerization of an ionic mesogenic monomer are examined for removal of three distinct viruses with small size: Qβ bacteriophage, MS2 bacteriophage, and Aichi virus. The semi‐bilayer structure of the SmA significantly obstructs the virus penetration with an average log reduction value of 7.3 log₁₀ or the equivalent of reducing 18 million viruses down to 1. Furthermore, the layered nanochannels of the SmA liquid crystal allow efficient water permeation compared to other types of liquid‐crystalline membrane consisting of nanopores.     

Assessment of possible human exposure to ochratoxin A in Croatia due to the consumption of dry-cured and fermented meat products

Ochratoxin A (OTA) is a toxic secondary metabolite produced by the fungi of Aspergillus and Penicillium species. Data indicate a frequent OTA contamination of cereals and cereal products, and consequently also the contamination of meat and meat products. The aim of this study was to determine a possible level of meat product consumers’ exposure to OTA through the consumption of dry-cured and fermented meat products available on the Croatian market. Data showed the weekly OTA intake of 90% of male dry-cured ham consumers to be a maximum of 51.9 ng kg^–1 b.w., i.e., far below the tolerable weekly intake (TWI) of 120 ng kg^–1 b.w. weekly set out by the European Food Safety Authority (EFSA). OTA intake coming from the consumption of other meat products under study is lower and ranges from 0.1 to 42.1 ng kg^–1 b.w. weekly, dependent on the study. The study demonstrated that meat products in Croatia do not constitute a notable source of OTA in the human diet, so that the human health risk coming from the consumption of dry-cured and fermented meat products is negligible.     

Phosphorylation of Src mutants at Tyr 527 in fibroblasts does not correlate with in vitro phosphorylation by CSK

In normal fibroblasts, the product of the cellular src gene, p60c-src or Src, is repressed by phosphorylation at its C-terminal tyrosine residue, Tyr 527. Mutations in Src that prevent phosphorylation cause enzymatic activation and malignant transformation. The tyrosine kinases that phosphorylate Src at Tyr 527 in vivo have not been identified, but a tyrosine kinase known as CSK is an excellent candidate. CSK has the unusual ability to phosphorylate Src in vitro only at Tyr 527. To examine whether CSK has the appropriate sequence specificy to explain the phosphorylation of Src at Tyr 527 in fibroblasts, we have made use of a set of C-terminal substitution mutants of Src. These mutants were previously characterized for their levels of Tyr 527 phosphorylation when expressed in Rat2 fibroblasts. The ability of CSK to phosphorylate selected mutants has now been tested, using both in vitro phosphorylation assays and co-expression of CSK with the Src mutants in a heterologous organism, Saccharomyces cerevisiae. We also tested whether the mutant Src molecules could autophosphorylate at Try 527, by examining the phosphorylation state of catalytically active forms expressed in the absence of CSK in yeast cells. The results show that CSK has strict sequence specificity for the normal Src sequence, although it can also phosphorylate the Lck sequence. The other mutant Src molecules tested were not phophorylated by CSK, even though some of these mutants are highly phosphorylated at Tyr 527 in Rat 2 cells. All the mutants that are phosphorylated at Tyr 527 in Rat2 cells are also able to autophosphorylate at Tyr 527. The results suggest that CSK, autophosphorylation, and phosphorylation by kinases other than CSK, may all contribution to repressing Src catalytic activity in fibroblasts.