Transient protein-protein interactions

Transient complexes are crucial for diverse biological processes such as biochemical pathways and signaling cascades in the cell. Here, we give an overview of the transient interactions; the importance of transient interactions as drug targets; and the structural characterization of transient protein-protein complexes based on the geometrical and physicochemical features of the transient complexes' interfaces. To better understand and eventually design transient protein-protein interactions (TPPIs), a molecular perspective of the protein-protein interfaces is necessary. Obtaining high-quality structures of protein-protein interactions could be one way of achieving this goal. After introducing the association kinetics of TPPIs, we elaborate on the experimental techniques detecting TPPIs in combination with the computational methods which classify transient and/or non-obligate complexes. In this review, currently available databases and servers that can be used to identify and predict TPPIs are also compiled.     

Structure, Properties and Behavior of Kyanite： Use in Refractory Monolithics

1 Introduction Kyanite is an important naturally occurring in-dustrial mineral and is used in the manufacture of avariety of industrial ceramic products; notable exam-ples include refractories and porcelains. It is a high-pressure polymorph of the aluminosilicates of the ne-sosilicate group, which includes kyanite, sillimanite,and andalusite. These three aluminous or alumina-rich minerals are chemically identical with the compo-sition, Al_2SiO_5, but have different crystal structuresand physical properties. It is, however, their alumina     

Synthesis,structural characterization,and antiproliferative/cytotoxic effects of a novel modified poly(maleic anhydride-co-vinyl acetate)/doxorubicin conjugate

Polymer Bulletin - Drug carrier, poly(maleic anhydride-co-vinyl acetate) (MAVA or poly[MA-co-VA]) copolymer, was traditionally synthesized by free radical chain polymerization reaction, in methyl...     

Biomimetic crystallization of calcium carbonate in the presence of water‐soluble zwitterionic block copolymer

Crystallization of calcium carbonate (CC) in aqueous solutions by gas‐liquid diffusion procedure was investigated systematically in the presence of poly(4‐sulfonic acid diphenylamine)‐block‐poly(ethylene glycol) (PSDA‐b‐PEG), wherein the PSDA block is a polymeric zwitterion. PSDA‐b‐PEG was synthesized with the reaction of tosylated PEG and amine‐functionalized PSDA and was characterized by nuclear magnetic resonance. The parameters such as, block copolymer concentration, crystallization time and initial pH were considered as indicators of block copolymer's capability in controlling the morphology of CC particles_. The particles were characterized by Fourier transform infrared, scanning electron microscopy, and X‐ray diffraction. The results suggest that PSDA‐b‐PEG is a suitable template to control the growth mechanism of CC to produce meso‐sized particles with different morphologies. POLYM. ENG. SCI., 59:96–102, 2019. © 2018 Society of Plastics Engineers     

Multidisciplinary Design Optimization for Glass-Fiber Epoxy-Matrix Composite 5 MW Horizontal-Axis Wind-Turbine Blades

A multi-disciplinary design-optimization procedure has been introduced and used for the development of cost-effective glass-fiber reinforced epoxy-matrix composite 5 MW horizontal-axis wind-turbine (HAWT) blades. The turbine-blade cost-effectiveness has been defined using the cost of energy (CoE), i.e., a ratio of the three-blade HAWT rotor development/fabrication cost and the associated annual energy production. To assess the annual energy production as a function of the blade design and operating conditions, an aerodynamics-based computational analysis had to be employed. As far as the turbine blade cost is concerned, it is assessed for a given aerodynamic design by separately computing the blade mass and the associated blade-mass/size-dependent production cost. For each aerodynamic design analyzed, a structural finite element-based and a post-processing life-cycle assessment analyses were employed in order to determine a minimal blade mass which ensures that the functional requirements pertaining to the quasi-static strength of the blade, fatigue-controlled blade durability and blade stiffness are satisfied. To determine the turbine-blade production cost (for the currently prevailing fabrication process, the wet lay-up) available data regarding the industry manufacturing experience were combined with the attendant blade mass, surface area, and the duration of the assumed production run. The work clearly revealed the challenges associated with simultaneously satisfying the strength, durability and stiffness requirements while maintaining a high level of wind-energy capture efficiency and a lower production cost.     

Preconditioning of AISI 304 stainless steel surfaces in the presence of flavins—Part II: Effect on biofilm formation and microbially influenced corrosion processes

Biofilm formation and microbially influenced corrosion of the iron-reducing microorganism Shewanella putrefaciens were investigated on stainless steel surfaces preconditioned in the absence and presence of flavin molecules by means of XANES (X-ray absorption near-edge structure) analysis and electrochemical methods. The results indicate that biofilm formation was promoted on samples preconditioned in electrolytes containing minute amounts of flavins. On the basis of the XANES results, the corrosion processes are controlled by the iron-rich outer layer of the passive film. Biofilm formation resulted in a cathodic shift of the open circuit potential and a protective effect in terms of pitting corrosion. The samples preconditioned in the absence of flavins have shown delayed pitting and the samples preconditioned in the presence of flavins did not show any pitting in a window of −0.3- to +0.0-V overpotential in the bacterial medium. The results indicate that changes in the passive film chemistry induced by the presence of minute amounts of flavins during a mild anodic polarization can change the susceptibility of stainless steel surfaces to microbially influenced corrosion.     

Computational analysis of fouling by low energy surfaces

Fouling is a cost increasing problem for a variety of industries including aerospace, chemical, petroleum, and food. There have been studies on mitigation of fouling some of which recommend use of lower surface free energy materials, manufactured by different techniques, as an alternative to conventional materials. Although modeling of fouling for a given surface has been an area of interest; there is a lack in the models about correlating the surface free energy with deposit amount computationally. In this study, computational model, including the effect of surface energy and operational parameters, was proposed and validated to estimate amount of foulants deposits and rate of deposition. Towards this purpose, four coated surfaces (Microlube/PTFE, TM117P, AMC148, and CNT) were compared with stainless steel (SS316 as control) for flow rates of 3 and 10 g/s and inlet milk temperatures of 40 and 60 °C. The percent error for the decrease in outlet milk temperatures between the experimental data and computed results was between 2% and 18% except for CNT (29.2%). The calculations of deposit amount for each test case and the surfaces tested were in good agreement with the experiments, i.e., average percent difference values between measured and calculated values were from 11.1% to 38.1% (except CNT) with overall average of 21.5%.     

Purification of peroxidase from Amsonia orientalis by three-phase partitioning and its biochemical characterization

The present work describes the purification and characterization of peroxidase from the medicinal plant, Amsonia orientalis, for the first time. The activity recovery for peroxidase was 162% with 12.5-fold purification. Optimal purification parameters were 20% (w/v) (NH₄)₂SO₄ saturation at pH 6.0 and 25°C with 1.0:1.0 (v/v) ratio of crude extract to t-butanol ratio for 30 min. The molecular mass of the enzyme was found to be ca. 59 kDa. Peroxidase showed K_m values of 1.88 and 2.0 mM for pyrogallol and hydrogen peroxide, respectively. FeSO₄, CuSO₄, HgCl₂, MnSO₄ and MgSO₄ did not inhibit the enzyme activity.