Phytoplankton Productivity and Standing Crop in the Vicinity of the Lake Huron-Saginaw Bay Front

Continuous underway sampling was used in four research cruises near the mouth of Saginaw Bay in order to locate the bay-lake front, where eutrophic bay water mixes with oligotrophic Lake Huron water. Although mixing between these water masses normally occurs in outer Saginaw Bay, the distribution was variable, depending on wind force and direction as well as water temperature. Large algal crops in inner Saginaw Bay had reduced soluble nutrients, particularly silicate and nitrate-nitrogen, in the outer bay to levels lower than the adjacent lake water. Nonetheless, outer bay water supported high algal biomass (up to 14 μg/L chlorophyll a) and ¹⁴C uptake (up to 73 μg /L/h). The phytoplankton community at the nutrient front between bay and lake waters was characterized by high chlorophyll a biomass ($\overline{x}$ = 4.47 μg/L), low ¹⁴C uptake ($\overline{x}$ = 7.12 μg/L/h), and high bacterial activity (V_max$\overline{x}$ = 1.33) indicating the presence of a senescent assemblage. Decomposition and settling of phytoplankton in the vicinity of the front apparently served to remove much of the bay plankton from the water column before mixing into the open lake. But, during mid-summer, occasional large inputs of nutrients and/or phytoplankton from the bay into the open lake were observed.     

The complexity of approximately counting stable roommate assignments

We investigate the complexity of approximately counting stable roommate assignments in two models: (i) the k-attribute model, in which the preference lists are determined by dot products of “preference vectors” with “attribute vectors” and (ii) the k-Euclidean model, in which the preference lists are determined by the closeness of the “positions” of the people to their “preferred positions”. Exactly counting the number of assignments is #P-complete, since Irving and Leather demonstrated #P-completeness for the special case of the stable marriage problem (Irving and Leather, 1986 [11]). We show that counting the number of stable roommate assignments in the k-attribute model (#k-attribute SR, $k?4$) and the 3-Euclidean model (#k-Euclidean SR, $k?3$) is interreducible, in an approximation-preserving sense, with counting independent sets (of all sizes) ($\mathrm{\#}\mathit{IS}$) in a graph, or counting the number of satisfying assignments of a Boolean formula ($\mathrm{\#}\mathit{SAT}$). This means that there can be no FPRAS for any of these problems unless NP = RP. As a consequence, we infer that there is no FPRAS for counting stable roommate assignments ($\mathrm{\#}\mathit{SR}$) unless NP = RP. Utilizing previous results by Chebolu, Goldberg and Martin (2010) [3], we give an approximation-preserving reduction from counting the number of independent sets in a bipartite graph ($\mathrm{\#}\mathit{BIS}$) to counting the number of stable roommate assignments both in the 3-attribute model and in the 2-Euclidean model. $\mathrm{\#}\mathit{BIS}$ is complete with respect to approximation-preserving reductions in the logically-defined complexity class $\mathrm{\#}\mathrm{RH}{\mathrm{\Pi }}_1$. Hence, our result shows that an FPRAS for counting stable roommate assignments in the 3-attribute model would give an FPRAS for all $\mathrm{\#}\mathrm{RH}{\mathrm{\Pi }}_1$. We also show that the 1-attribute stable roommate problem always has either one or two stable roommate assignments, so the number of assignments can be determined exactly in polynomial time.     

The effects of pick density on order picking areas with narrow aisles

The cost and service performance of an order fulfillment center are determined partly by how workers are organized into an order picking system. One common approach is batch picking, in which workers circumnavigate a picking area with other workers, gathering items on a pick list. In some systems with high space utilization, narrow aisles prohibit workers from passing one another when in the same aisle, and this leads to congestion. We build analytical and simulation models of these systems to investigate their behavior under different levels of activity. Among other things, our results suggest that when the system is busier and pick density is high (that is, when workers stop often to make picks) congestion is less of a problem and workers are more productive.     

Parallel implementation of time-dependent density functional theory

We present a massively parallel implementation of time-dependent density functional theory in real space, aimed at computing optical absorption spectra of realistic systems with hundreds of atoms from first principles. We provide details of the formalism and discuss its implementation, optimization, and efficient parallelization, as well as remaining limitations, in detail. The capabilities of the code are illustrated by calculations of optical properties of hydrogenated silicon quantum dots.     

Interactive Construction and Animation of Layered Elastically Deformable Characters

An interactive system is described for creating and animating deformable 3D characters. By using a hybrid layered model of kinematic and physics-based components together with an immersive 3D direct manipulation interface, it is possible to quickly construct characters that deform naturally when animated and whose behavior can be controlled interactively using intuitive parameters. In this layered construction technique, called the elastic surface layer model, a simulated elastically deformable skin surface is wrapped around a kinematic articulated figure. Unlike previous layered models, the skin is free to slide along the underlying surface layers constrained by geometric constraints which push the surface out and spring forces which pull the surface in to the underlying layers. By tuning the parameters of the physics-based model, a variety of surface shapes and behaviors can be obtained such as more realistic-looking skin deformation at the joints, skin sliding over muscles, and dynamic effects such as squash-and-stretch and follow-through. Since the elastic model derives all of its input forces from the underlying articulated figure, the animator may specify all of the physical properties of the character once, during the initial character design process, after which a complete animation sequence can be created using a traditional skeleton animation technique. Character construction and animation are done using a 3D user interface based on two-handed manipulation registered with head-tracked stereo viewing. In our configuration, a six degree-of-freedom head-tracker and CrystalEyes shutter glasses are used to display stereo images on a workstation monitor that dynamically follow the user head motion. 3D virtual objects can be made to appear at a fixed location in physical space which the user may view from different angles by moving his head. To construct 3D animated characters, the user interacts with the simulated environment using both hands simultaneously: the left hand, controlling a Spaceball, is used for 3D navigation and object movement, while the right hand, holding a 3D mouse, is used to manipulate through a virtual tool metaphor the objects appearing in front of the screen. Hand-eye coordination is made possible by registering virtual space to physical space, allowing a variety of complex 3D tasks necessary for constructing 3D animated characters to be performed more easily and more rapidly than is possible using traditional interactive techniques.     

Family-Focused Preventive Interventions: Evaluating Parental Risk Moderation of Substance Use Trajectories.

Four years of longitudinal data from 373 families participating in a randomized intervention-control clinical trial were used to examine whether intervention effects on adolescent alcohol and tobacco use trajectories were moderated by family risk, as defined by parental social emotional maladjustment. Consistent with earlier outcome evaluations based on analyses of covariance, analyses confirmed that both the Preparing for the Drug Free Years program and the Iowa Strengthening Families Program favorably influenced alcohol use index trajectories across the time frame of the study; only the latter program, however, evidenced positive effects on a tobacco use index. Concerning the primary research question, analyses provided no support for family risk moderation of any intervention effect. Findings indicate the feasibility of developing universal preventive interventions that offer comparable benefits to all families. (PsycINFO Database Record (c) 2010 APA, all rights reserved)     

Human, rhesus macaque, and feline sequences highly similar to mouse mammary tumor virus sequences

Sequences highly similar (>95%) to the mouse mammary tumor virus (MMTV) env gene have been amplified from human DNA samples, including DNA samples from patients with breast cancer (BC) and persons who did not have BC. The sequences from human DNA were distinct from the MMTV sequences used as controls in these PCR reactions, indicating that these results are not simply due to contamination. In addition to both, mouse and human-related sequences were also amplified from some monkey and cat genomic DNA samples. These products were shown to be distinct from, but highly related to, the MMTV env gene, whereas, testing of other sources (lambda phage, snake, cockroach, sea urchin, chicken, or dog) demonstrated no specific amplification. A sequence 90% similar to the MMTV group antigen gene (gag) was amplified from cat DNA. These results indicate that DNA from vertebrate species other than rodents, including some but not all humans, monkeys, and cats, can contain sequences closely related to MMTV.