Heterologous expression and functional analysis of the gene cluster for the biosynthesis of and immunity to the lantibiotic, nukacin ISK-1

Nukacin ISK-1 is a lantibiotic produced by Staphylococcus warneri ISK-1. The gene cluster of nukacin ISK-1 consists of at least nukAMTFEG, ORF1 and ORF7. In this study, we demonstrated the heterologous production of nukacin ISK-1 in Lactococcus lactis by the artificial polycistronic expression of nukAMTFEG-ORF7 under the control of the nisin-controlled expression (NICE) system. Consequently, the recombinant L. lactis showed antimicrobial activity. Mass analysis clarified the presence of nukacin ISK-1 produced in the culture supernatant. These results suggested that the recombinant L. lactis produced nukacin ISK-1 heterologously. Inactivation of nukA, -M or -T resulted in the complete loss of the nukacin ISK-1 production phenotype. This finding suggested that nukAMT are indispensably associated with the biosynthesis of nukacin ISK-1. To our knowledge, this is the first report of the heterologous production of lantibiotic using the NICE system.     

Effect of heterologous expression of molecular chaperone DnaK from Tetragenococcus halophilus on salinity adaptation of Escherichia coli

Molecular chaperone DnaK of halophilic Tetragenococcus halophilus JCM5888 was characterized under salinity conditions both in vitro and in vivo. The dnaK gene was cloned into an expression vector and transformed into Escherichia coli. The DnaK protein obtained from the recombinant E. coli showed a significantly higher refolding activity of denatured lactate dehydrogenase than that from non-halophilic Lactococcus lactis under NaCl concentrations higher than 1 M. E. coli without the overexpression of DnaK exhibited a growth profile with a prolonged lag phase and suppressed maximum cell density in Luria-Bertani medium containing 5% (0.86 M) NaCl. On the contrary, the overexpression of T. halophilus DnaK greatly shortened this prolonged lag phase with no effect on maximum growth, while that of L. lactis DnaK decreased maximum growth. The amount of protein aggregates was increased by salt stress in the E. coli cells, while this aggregation was greatly suppressed by the overexpression of T, halophilus DnaK. These results suggest that heterologous overexpression of T. halophilus DnaK, via its chaperone activity, promotes salinity adaptation of E. coli.     

Perfluorinated compounds in the Cape Fear Drainage Basin in North Carolina

Concern over perfluorinated organic compounds (PFCs), e.g., perfluorooctane sulfonate (PFOS) and perfluorooctanoic acid (PFOA), is due to a number of recent studies which show that the PFCs are persistent, bioaccumulative, and toxic in animals. Despite sustained interest in this topic, little information is available concerning the environmental distributions of the compounds. In this study, a new method was developed for the analysis of 10 target PFCs and its performance was examined in a systematic evaluation of surface water in the Cape Fear River Basin in North Carolina. One hundred samples from 80 different locations were collected during the spring of 2006. Detectable levels of the target PFCs were found in all samples, and were comparable to values reported previously, with maximum PFOS at 132 ng/L, PFOA at 287 ng/L, perfluorononanoic acid (C9) at 194 ng/L, and perfluoroheptanoic acid (C7) at 329 ng/L. In general, the lowest concentrations of the PFCs were found in the smallest tributaries while the highest levels were found in middle reaches of the Drainage Basin. Variability of PFC concentrations suggests a series of source inputs throughout the Basin. Seventeen sample sites (22%) had PFOS concentrations greater than 43 ng/L, a conservative safe water concentration estimated to be protective of avian life. In addition, a total of 26 sites (32%) had PFOA concentrations above 40 ng/L.     

Epoxy resin-based nanocomposite films with highly oriented BN nanosheets prepared using a nanosecond-pulse electric field

Facile orientation of boron nitride (BN) with high anisotropy in epoxy resin-based nanocomposite films was performed in a polyepoxide matrix using a nanosecond-pulse electric field to generate a high electric flux. Control of the BN anisotropy was achieved in the polymer without damaging the composite films or requiring surface modification of the BN. The degree of BN orientation perpendicular to the nanocomposite film plane, which was parallel to the electric flux, could be controlled by applying the nanosecond pulse for different lengths of time before cross-linking. The resulting composite films with oriented BN nanosheets manifested improved thermal diffusivity compared to a composite prepared without orientation.     

Selective hydrobromination of metallurgical-grade silicon in a flow reactor system

Reactions of metallurgical-grade silicon (MG-Si) with gaseous hydrogen bromide (HBr) has been monitored by means of online gas chromatography in a flow reactor system. The formation of tri-bromosilane started to occur at 380 °C, accompanied by the consumption of HBr. The conversion of HBr into bromosilanes increased with an increase in reaction temperature and reached a maximum at 440 °C. An increase of the HBr concentration in a HBr-N₂ mixed gas led to an increase in the consumption of MG-Si, while it reduced the selectivity of the tri-bromosilane formation. An increase in total flow rate of the reaction gas caused a dramatic decrease in the HBr conversion and enhanced the selectivity of the tri-bromosilane formation. The rate constant for overall bromination reaction at 400 °C was measured to be 0.46 s⁻¹. Concentrations of impurities in the product were much less than those in MG-Si. Moreover, kerf loss silicon was subjected to the bromination reaction under the optimized conditions.     

Interspecies comparison of hepatic metabolism of six newly synthesized retinoid X receptor agonistic compounds possessing a 6-[N-ethyl-N-(alkoxyisopropylphenyl)amino]nicotinic acid skeleton in rat and human liver microsomes

Objective: The hepatic metabolism of six compounds newly synthesized as retinoid X receptor agonists was characterized in rat and human liver microsomes to examine the relationship between their hepatic metabolism profiles and side chain structures, considering the interspecies difference.

Materials and methods: The compounds used have a 6-[N-ethyl-N-(3-alkoxy-4-isopropylphenyl)amino]nicotinic or 6-[N-ethyl-N-(4-alkoxy-3-isopropylphenyl)amino]nicotinic acid skeleton, in which the isopropoxy, isobutoxy or cyclopropylmethoxy group is employed for the alkoxy group. These compounds were incubated with the microsomes, and their Michaelis--Menten parameters were determined. The incubation study was also performed with various cytochrome P450 (CYP) inhibitors to examine their susceptibilities to the inhibitors. In addition, a molecular docking simulation was conducted to assess the compound’s spatial configuration with the CYP isoform when necessary.

Results: The Michaelis--Menten parameters determined are comparable between rats and humans for the compounds having 3-isobutoxy, 4-isobutoxy, 4-isopropoxy and 4-cyclopropylmethoxy groups. However, it was indicated that all compounds except that having the 3-isobutoxy group are metabolized in a different manner between rats and humans. That is, the extent of the contribution of each CYP isozyme is different between those two species. A molecular docking simulation showed that the spatial configuration of the compound to be associated with CYP2D6 markedly changes depending on whether the isobutoxy group is situated at the 3- or 4-position.

Conclusion: A slight difference in the side chain structures markedly alters the compound’s metabolic profile, which amplifies the interspecies difference regarding the profile, increasing the difficulty in characterizing the profile in humans with the structural-property relationship and interspecies extrapolation.     

Angled long tip to tuning fork probes for atomic force microscopy in various environments

We expand the range of applications of a tuning fork probe (TFP) in frequency-modulation atomic force microscopy (FM-AFM) by attaching a long metal tip at a certain angle. By the combined flexure of the metal tip and the tuning fork prong, this TFP can change the direction of the detectable force by switching the resonance frequency, which has not been realized with conventional TFPs with short tips. The oscillatory behavior of the tip apex of the TFP is predicted by computer simulations and is experimentally confirmed with scanning electron microscope. FM-AFM operations using this TFP are performed in various environments, i.e., in ultrahigh vacuum, air, and water. FM-AFM images obtained at an atomic step of highly oriented pyrolytic graphite in air show a clear difference depending on the excitation frequency. It is also revealed that the higher order flexural modes of this TFP are advantageous for FM-AFM in water due to the reduction in the degree of hydrodynamic damping.     

Chemi-emission of electrons from metal surfaces in the cutting process due to metal/gas interactions

The exo-electron emission behaviour from Ti, W, Mo, Fe, Al, Ni, Cd, Zn and Pb metals was investigated during and after being cut in O₂ and N₂ gases at a gas pressure of 3 × 10⁻² Pa and in a vacuum of 4 × 10⁻⁴ Pa. The results showed that the emission behaviour of electrons during and after cutting depends on the combination of metal and the surrounding gas species. The emission intensity of electrons while cutting various metals in O₂ gas increased sharply with an increase in the negative value of the heat cf formation, ΔH_f of the oxide. The emission intensity in N₂ was also higher at higher negative values of ΔH_f of the metal nitride. Electron emission intensity from the cut metal surface is concluded to be a function of the heat of formation of reaction products of the metal surface with the surrounding gas.