Comparative study of artificial neural network for classification of hot and cold recombination regions in Saccharomyces cerevisiae

At the chromosomal level of evolution, recombination is a major factor for genetic variations. However, recombination does not occur with equal frequency at various regions of genome. The recombination has the tendency to occur at specific region with higher frequency and with low frequency at other regions, and former regions are named as hot recombination regions whereas later are called cold regions for recombination. In this paper, we have developed supervised machine learning-based models using artificial neural network, support vector machine and Naïve Bayes for efficient and effective classification of such hot and cold recombination regions based on the nucleotide composition of sequences. All models were validated and tested using tenfold cross-validation. Furthermore, neural network model was validated using leave one out and random sampling techniques in addition to tenfold cross-validation. Moreover, models were evaluated using receiver-operating curve. Our results indicate that artificial neural network achieves the best result.

     

PCL Nanopillars Versus Nanofibers: A Contrast in Progenitor Cell Morphology,Proliferation, and Fate Determination

The role of nanotopography on the long‐term response of progenitor cells is explored using polycaprolactone (PCL) nanopillar and nanofiber surfaces seeded with plastic‐adherent rat multipotent mesenchymal stromal cells (MSCs). After 4 weeks in culture under normal expansion media conditions, MSCs cultured on nanofibers exhibit better adherence, increased proliferation, and maintain increasingly dense fibroblast‐like morphologies. In contrast, MSCs seeded on nanopillar surfaces display lowered adherence, reduced proliferation, and adopt highly elongated cellular morphologies. Immunofluorescent staining of MSCs on PCL nanopillars reveals the presence of two bone marker proteins, osteopontin and osteocalcin, providing evidence for surface induced differentiation into osteoblast‐like cells. Unlike the nanopillar topography, MSCs cultured on nanofiber and smooth PCL surfaces did not appear to undergo osteogenesis. Observed differences in cellular response to the PCL nanotopographies offer strategies to direct progenitor cell populations solely based upon submicron surface modifications. This study provides a foundation for future work exploring variations in PCL nanopillar topography with the goal of optimizing adherence and osteogenic response of MSCs.     

Effect of NOx on AgI formation in Ag-mordenite

Ag loaded mordenite can be used as a trap for radio-iodine arising from nuclear reprocessing operations. Typically, iodine is trapped in the Ag loaded mordenite by the formation of AgI in the pores of the mordenite, through a solid-vapour reaction. In the presence of NO_x and water vapour, AgI is most likely formed by liquid-vapour reaction between AgNO₃ and I₂. This reaction results in the formation of large aggregates of AgI crystals on the surface of the mordenite, also leading to a yellow colouration of the mordenite, which is not observed when NO_x and water vapour is absent.     

Combustion analysis of the diesel–biogas dual fuel direct injection diesel engine – the gas diesel engine

In this investigation, biogas (BG) was used as an alternative fuel in a single-cylinder, four-stroke, air-cooled, direct injection (DI) diesel engine that was operated on a dual fuel mode. Biogas was produced from a non-edible seed de-oiled cake-pongamia pinnata (Karanja), which was collected from the biodiesel industries. The BG was inducted along with the air in suction of the engine at four different flow rates varying from 0.3?kg/h to 1.2?kg/h in steps of 0.3?kg/h. The investigation results revealed that BG inducted at a flow rate of 0.9?kg/h gives better combustion characteristics of engine behaviour than those of other flows throughout the engine operation. The ignition delay (ID) and combustion duration of the engine run by dual fuel operation at a BG flow rate of 0.9?kg/h were found to be longer by about 2 °CA and 2.9 °CA, respectively, in comparison with diesel at full load. The cylinder peak pressure was found to be overall higher by about 11?bar than that of diesel at full load.     

Sustainable hydrogen production by catalytic hydrolysis of alkaline sodium borohydride solution using recyclable Co-Co2B and Ni-Ni3B nanocomposites

In this article, we report Co-Co₂B and Ni-Ni₃B nanocomposites as catalyst for hydrogen generation from alkaline sodium borohydride. Kinetic studies of the hydrolysis of sodium borohydride with Co-Co₂B and Ni-Ni₃B nanocomposites reveal that the concentration of NaBH₄ has no effect on the rate of hydrogen generation. Hydrolysis was found to be first order with respect to the concentration of catalyst. The catalytic activity of Co-Co₂B was found to be much higher than that of Ni-Ni₃B as inferred from the activation energies 35.245 KJ/mol and 55.810 kJ/mol, respectively. Co-Co₂B nanocomposites were found to be more magnetic than Ni-Ni₃B. These catalysts showed superior recyclability with almost the similar catalytic activities for several hydrolytic cycles supporting the principles of sustainability. Co-Co₂B catalyst showed hydrogen generation rate of about 4300 mL/min/g which is comparable to most of the reported good catalysts till date.     

Hardystonite improves biocompatibility and strength of electrospun polycaprolactone nanofibers over hydroxyapatite: A comparative study

The aim of this study was to compare physico-chemical and biological properties of hydroxyapatite (HA) and hardystonite (HS) based composite scaffolds. Hardystonite (Ca₂ZnSi₂O₇) powders were synthesized by a sol–gel method while polycaprolactone–hardystonite (PCL–HS) and polycaprolactone–hydroxyapatite (PCL–HA) were fabricated in nanofibrous form by electrospinning. The physico-chemical and biological properties such as tensile strength, cell proliferation, cell infiltration and alkaline phosphatase activity were determined on both kinds of scaffolds. We found that PCL–HS scaffolds had better mechanical strength compared to PCL–HA scaffolds. Addition of HA and HS particles to PCL did not show any inhibitory effect on blood biocompatibility of scaffolds when assessed by hemolysis assay. The in vitro cellular behavior was evaluated by growing murine adipose-tissue-derived stem cells (mE-ASCs) over the scaffolds. Enhanced cell proliferation and improved cellular infiltrations on PCL–HS scaffolds were observed when compared to HA containing scaffolds. PCL–HS scaffolds exhibited a significant increase in alkaline phosphatase (ALP) activity and better mineralization of the matrix in comparison to PCL–HA scaffolds. These results clearly demonstrate the stimulatory role of Zn and Si present in HS based composite scaffolds, suggesting their potential application for bone tissue engineering.     

Study on effect of diverse air inlet arrangement on thermal management of cylindrical lithium-ion cells

Lithium-ion cells are preferred in the electrical powertrain due to high-power density, compactness, and modularity. In real driving conditions, the cells undergo discharge rates as high as 4 C resulting in high heat generation affecting the performance. To obtain the maximum performance the pack construction and thermal management of cells are crucial parameters. In our work, air-cooled technique with diverse air inlet and staggered scheme with a two-channel partition approach for thermal management of the cylindrical lithium-ion cells are studied in computational fluid dynamics. The simulation model is validated with experimental results. The obtained results demonstrate that the cells in the dual-directional air inlet arrangement had low maximum temperature difference among and within the cells and required least fan work. This arrangement required least fan work to generate optimal air inlet velocity of 2 m/s for 1, 2, and 3 C and 4 m/s for 4 C discharge rates. There is a reduction of 50% and 33% fan work for 3 and 4 C discharge rates, which are the majority operating points. Also, it shows that the temperature uniformity within the cells has improved. The results of this study can used to optimize parameters for designing an enhanced thermal management system.     

A study of external mass transfer effect on biodegradation of phenol using low‐density polyethylene immobilized Bacillus flexus GS1 IIT (BHU) in a packed bed bioreactor

The impact of external mass transport on the biodegradation rate of phenol in a packed bed bioreactor (PBBR) was studied. A potential bacterial species, Bacillus flexus GS1 IIT (BHU), was isolated from the petroleum‐contaminated soil. Low‐density polyethylene (LDPE) immobilized with the B. flexus GS1 IIT (BHU) was used as packing material in the PBBR. The PBBR was operated by varying the inlet feed flow rate from 4 to 10 mL/min, and the corresponding degradation rate coefficients were found to be in the range of 0.119–0.157 L/g h. In addition, the highest removal rate of phenol was obtained to be 1.305 mg/g h at an inlet feed rate of 10 mL/min. The external mass transfer was studied using the model . A new empirical correlation for the biodegradation of phenol in the PBBR was developed after the evaluation at various values of K and n.