DR/CLIP (class II-associated invariant chain peptides) and DR/peptide complexes colocalize in prelysosomes in human B lymphoblastoid cells

In APCs, MHC class II molecules (MHC class II) bind antigenic peptides after HLA-DM mediated removal of CLIP. To characterize intracellular sites of peptide loading in human B lymphoblastoid cell lines, we conducted immunoelectron microscopy studies with Abs recognizing MHC class II associated with CLIP or bound peptide, respectively, together with Abs to HLA-DM and endocytic markers. The distribution of these molecules indicates that peptide binding occurs in compartments with characteristics of normal late endosomes, and in compartments that show characteristics of late endosomes, but are not detectably accessed by endocytosed BSA-gold. The latter compartments may represent or give rise to recycling vesicles that deliver peptide-loaded class II molecules to the cell surface. In addition, we have compared cells in which HLA-DM and HLA-DR interaction is defective with cells in which this interaction is intact, and find that DM/DR interaction is not required for the proper localization of either molecule to peptide-loading compartments.     

Determination of the critical inclusion size with respect to void formation during hot working

A theory for determining the critical inclusion size with respect to void formation during hot working operation is presented. The theoretical model assumes that the relationship between inclusion size (r) and number (n) is of the typen = 1/r^α. Equations are deduced for the three cases α = 2,α = 3 and α = 4. The most reliable results are obtained if α equals 3 or 4. The critical inclusion size is of the order of 2.5 to 3.5 μm for strains of about 0.7.     

Anthropogenic contributions to mercury levels in present-day Arctic animals—A review

Background

Because of concern about the recently increasing levels of biological Hg in some areas of the Arctic, we examined the literature concerning the long-term changes of Hg in humans and selected Arctic marine mammals and birds of prey since pre-industrial times (i.e. before 1800 A.D.), to determine the anthropogenic contribution to present-day Hg concentrations and the historical timing of any changes.

Methods

Mercury data from published articles were extracted on historical and pre-industrial concentrations as percentages of the recent maximum, as well as the man-made contribution was calculated and depicted in a uniform manner to provide an overview of the development over time.

Results and discussion

Trends of [Hg] in hard tissues such as teeth, hair and feathers consistently showed that there had been an order-of-magnitude increase of [Hg] in Arctic marine foodweb-based animals that began in the mid- to late-19th Century and accelerated in the 20th Century. The median man-made contribution to present-day Hg concentrations was 92.4% ranging from 74.2 to 94.4%. Confidence in our data was increased by accompanying data in some studies on stable isotopes (δ¹³C, δ¹⁵N), which allowed us to normalize where necessary for changes in animal trophic position and feeding location over time, and by careful attention to the possibility of sample chemical diagenesis (Hg contamination or loss) which can alter the Hg content of ancient hard tissues.

Conclusions

Wildlife hard tissue matrices provide consistent information with respect to the steep onset of Hg exposure of Arctic wildlife beginning in the latter half of the 19th Century. Today the man-made contribution was found to be above 92%. Stable isotope analyses provide important information to normalize for possible changes in diet over time, and are highly relevant to include when interpreting temporal trends, baseline concentrations as well as man-made anthropogenic contribution of Hg.     

Survey of occupant behaviour and control of indoor environment in Danish dwellings

Repeated surveys of occupant control of the indoor environment were carried out in Danish dwellings from September to October 2006 and again from February to March 2007. The summer survey comprised 933 respondents and the winter survey 636 respondents. The surveys were carried out by sending out invitations to addresses obtained from a Danish register along with information on dwelling characteristics. Meteorological data was obtained from the Danish Meteorological Institute.Four control mechanisms (window open/closed, heating on/off, lighting on/off and solar shading in/not in use) were analysed separately by means of multiple logistic regression in order to quantify factors influencing occupants’ behaviour.The window opening behaviour was strongly related to the outdoor temperature. The perception of the environment and factors concerning the dwelling also impacted the window opening behaviour.The proportion of dwellings with the heating turned on was strongly related to the outdoor temperature and the presence of a wood burning stove. The solar radiation, dwelling ownership conditions and the perception of the indoor environment also affected the use of heating.The results of the statistical analyses form a basis for a definition of standard behaviour patterns which can be used to make calculation of energy consumption of buildings more accurate.     

Xenoendocrine pollutants may reduce size of sexual organs in East Greenland polar bears (Ursus maritimus)

Reproductive organs from 55 male and 44 female East Greenland polar bears were examined to investigate the potential negative impact from organohalogen pollutants (OHCs). Multiple regressions normalizing for age showed a significant inverse relationship between OHCs and testis length and baculum length and weight, respectively, and was found in both subadults (dichlorodiphenyl trichloroethanes, dieldrin, chlordanes, hexacyclohexanes, polychlorinated biphenyls (PCBs), and polybrominated diphenyl ethers (PBDEs)) and adults (hexachlorobenzene [HCB]) (all p < 0.05). Baculum bone mineral densities decreased with increasing chlordanes, DDTs, and HCB in subadults and adults, respectively (all p < 0.05). In females, a significant inverse relationship was found between ovary length and sigma PCB (p = 0.03) and sigma CHL (p < 0.01), respectively, and between ovary weight and sigma PBDE (p < 0.01) and uterine horn length and HCB (p = 0.02). The study suggests thatthere is an impact from xenoendocrine pollutants on the size of East Greenland polar bear genitalia. This may pose a riskto this polar bear subpopulation in the future because of reduced sperm and egg quality/quantity and uterus and penis size/robustness.     

Drift‐diffusion model for intermediate band solar cells including photofilling effects

A novel drift‐diffusion model for intermediate band solar cells (IBSC) is presented. The model differs from previous drift‐diffusion models by allowing the carrier concentrations in all three bands to vary. It is developed for the idealized case where only radiative recombination occurs and where the IB has zero width. The model is used to compare the performance of IBSCs where the IB‐region is doped to get a partially filled IB (prefilled IBSC) to IBSCs where the IB‐region is not doped to partially fill the IB (photofilled IBSC). Numerical results show that a photofilled IBSC can achieve high efficiencies when operated under concentrated light. In fact, for some particular cases, a photofilled cell will perform better than a prefilled cell. The optimal degree of prefilling, i.e. the ratio of the concentration of doping atoms to the total number of IB‐states, is found for a particular example. It is also examined how the carrier concentrations in all three bands, the conduction, the intermediate and the valence bands, vary in prefilled and photofilled IBSCs. Finally, the band diagrams of a prefilled and photofilled IBSC are discussed. Copyright © 2010 John Wiley & Sons, Ltd.     

Reproducibility of indoor environment characteristics obtained in a walk through questionnaire. A pilot study

Walk through questionnaires may be feasible tools to obtain data on the indoor environment in community studies. However, limited information is available regarding the reproducibility of the data obtained through these questionnaires. In this pilot study, two construction engineering students inspected ten dwellings twice by means of a standardized walk through questionnaire. The two engineering students inspected the dwellings independent of each other within two months. Time between the two visits varied between 14 and 40 days. The variables presented were based on information from the residents and inspection. The continuous variables recorded included number of rooms in the dwellings, room volume, length of filled shelves and textile area. The inter- and intra-observed variabilities were poorer for number of rooms and shelf factor than for the other variables. For the 3 of the 9 categorical variables based on inspection, the inter-observer comparison showed complete agreement with a kappa statistics of 1.0, these variables being condition of the window frames and construction of outside walls and roof. One of the categorical variables showed a kappa statistics of < 0.5, these variables being presence of basement and presence of condensation at windows. This study indicates a wide variation in observer variability between various items of a walk through questionnaire. Clear definitions of all the parts of the questionnaire are needed, as well as thorough training of observers.     

Estrogen-induced alterations in amh and dmrt1 expression signal for disruption in male sexual development in the zebrafish

Dmrt1 and amh are genes involved in vertebrate sex differentiation. In this study, we cloned dmrt1 and amh cDNAs in zebrafish (Danio rerio) and investigated the effects of exposure to 17a-ethinylestradiol (EE2), during early life on their patterns of expression and impact on the subsequent gonadal phenotype. Expression of both amh and dmrt1 in embryos was detected as early as at 1 day post fertilization (dpf) and enhanced expression of amh from 25 dpf was associated with the period of early gonadal differentiation. Sex-dependent differences in enhanced green fluorescent protein transgene expression driven by the promoter of the germ cell-specific vas gene were exploited to show that at 28dpf and 56dpf both amh and dmrt1 mRNA were overexpressed in males compared with females. Exposure during early life to environmentally relevant concentrations of EE2 had a suppressive effect on the expression of both amh and dmrt1 mRNAs and this was associated with a cessation/retardation in male gonadal sex development. Our findings indicate that estrogen-induced suppression in expression of dmrt1 and amh during early life correlate with subsequent disruptive effects on the sexual phenotype in males.     

Estimation and inference in the same–different test

Inference for the Thurstonian δ in the same–different protocol via the well known Wald statistic is shown to be inappropriate in a wide range of situations. We introduce the likelihood root statistic as an alternative to the Wald statistic to produce CIs and p-values for assessing difference as well as similarity. We show that the likelihood root statistic is equivalent to the well known G² likelihood ratio statistic for tests of no difference. As an additional practical tool, we introduce the profile likelihood curve to provide a convenient graphical summary of the information in the data about δ.On the basis of simulations, we show that the coverage probability of the Wald-based 95% CI for δ is often far from 95%, whereas the coverage probability of the profile likelihood-based CI is close to the desired 95%. We also show how the likelihood framework can be used to combine information from independent experiments possibly using different discrimination protocols to obtain inference for a common δ. Finally, we provide a free R package with an implementation of the likelihood methodology presented in this paper.