Towards assembly completion and preparation of experimental campaigns of Wendelstein 7-X in the perspective of a path to a stellarator fusion power plant

The superconducting stellarator device Wendelstein 7-X, currently under construction, is the key device for the proof of stellarator optimization principles. To establish the optimized stellarator as a serious candidate for a fusion reactor, reactor-relevant dimensionless plasma parameters must be achieved in fully integrated steady-state scenarios. After more than 10 years of construction time, the completion of the device is now approaching rapidly (mid-2014). We discuss the most important lessons learned during the device assembly and first experiences with coming major work packages. Those are (a) assembly of about 2500 large, water-cooled, 3d-shaped in-vessel component elements; (b) assembly of in total 14 superconducting current leads, one pair for each coil type; and (c) assembly of the device periphery including diagnostics and heating systems. In the second part we report on the present status of planning for the first operation phase (5–10 s discharge duration at 8 MW heating power), the completion and hardening of the device for full power steady-state operation, and the second operation phase (up to 30 min discharge duration at 10 MW heating power). It is the ultimate goal of operation phase one to develop credible and robust discharge scenarios for the high-power steady-state operation phase two. Beyond the improved equilibrium, confinement, and stability properties owing to stellarator optimization, this requires density control, impurity control, edge iota control as well as high density microwave heating. Of paramount importance is the operation of the island divertor, which is realized in the first operation phase as an inertially cooled conventional graphite target divertor. It will be replaced later on by the steady-state capable island divertor with its water-cooled carbon fiber reinforced carbon target elements.     

Pathways of sulfide oxidation by haloalkaliphilic bacteria in limited-oxygen gas lift bioreactors

Physicochemical processes, such as the Lo-cat and Amine-Claus process, are commonly used to remove hydrogen sulfide from hydrocarbon gas streams such as landfill gas, natural gas, and synthesis gas. Biodesulfurization offers environmental advantages, but still requires optimization and more insight in the reaction pathways and kinetics. We carried out experiments with gas lift bioreactors inoculated with haloalkaliphilic sulfide-oxidizing bacteria. At oxygen-limiting levels, that is, below an O(2)/H(2)S mole ratio of 1, sulfide was oxidized to elemental sulfur and sulfate. We propose that the bacteria reduce NAD(+) without direct transfer of electrons to oxygen and that this is most likely the main route for oxidizing sulfide to elemental sulfur which is subsequently oxidized to sulfate in oxygen-limited bioreactors. We call this pathway the limited oxygen route (LOR). Biomass growth under these conditions is significantly lower than at higher oxygen levels. These findings emphasize the importance of accurate process control. This work also identifies a need for studies exploring similar pathways in other sulfide oxidizers such as Thiobacillus bacteria.     

DXP Synthase‐Catalyzed C?N Bond Formation: Nitroso Substrate Specificity Studies Guide Selective Inhibitor Design

1‐Deoxy‐D ‐xylulose 5‐phosphate (DXP) synthase catalyzes the first step in the nonmammalian isoprenoid biosynthetic pathway to form DXP from pyruvate and D ‐glyceraldehyde 3‐phosphate (D ‐GAP) in a thiamin diphosphate‐dependent manner. Its unique structure and mechanism distinguish DXP synthase from its homologues and suggest that it should be pursued as an anti‐infective drug target. However, few reports describe any development of selective inhibitors of this enzyme. Here, we reveal that DXP synthase catalyzes C? N bond formation and exploit aromatic nitroso substrates as active site probes. Substrate specificity studies reveal a high affinity of DXP synthase for aromatic nitroso substrates compared to the related ThDP‐dependent enzyme pyruvate dehydrogenase (PDH). Results from inhibition and mutagenesis studies indicate that nitroso substrates bind to E. coli DXP synthase in a manner distinct from that of D ‐GAP. Our results suggest that the incorporation of aryl acceptor substrate mimics into unnatural bisubstrate analogues will impart selectivity to DXP synthase inhibitors. As a proof of concept, we show selective inhibition of DXP synthase by benzylacetylphosphonate (BnAP).     

Industrial high‐rate (∼5 nm/s) deposited silicon nitride yielding high‐quality bulk and surface passivation under optimum anti‐reflection coating conditions

High‐quality surface and bulk passivation of crystalline silicon solar cells has been obtained under optimum anti‐reflection coating properties by silicon nitride (a‐SiN_x:H) deposited at very high deposition rates of ∼5 nm/s. These a‐SiN_x:H films were deposited using the expanding thermal plasma (ETP) technology under regular processing conditions in an inline industrial‐type reactor with a nominal throughput of 960 solar cells/hour. The low surface recombination velocities (50–70 cm/s) were obtained on p‐type silicon substrates (8·4 Ω cm resistivity) for as‐deposited and annealed films within the broad refractive index range of 1·9–2·4, which covers the optimum bulk passivation and anti‐reflection coating performance reached at a refractive index of ∼2·1. Copyright © 2005 John Wiley & Sons, Ltd.     

Antigens and Antibodies of the Antiphospholipid Syndrome as New Allies in the Pathogenesis of COVID-19 Coagulopathy

High prevalence of both criteria and extra-criteria antiphospholipid antibodies (aPL) has been reported in COVID-19 patients. However, the differences in aPL prevalence decreased when an age-matched control group was included. The association of aPL with thrombotic events in COVID-19 is very heterogeneous. This could be influenced by the fact that most of the studies carried out were conducted on small populations enriched with elderly patients in which aPL was measured only at a single point and they were performed with non-standardized assays. The few studies that confirmed aPL in a second measurement showed that aPL levels hardly changed, with the exception of the lupus anticoagulant that commonly reduced. COVID-19 coagulopathy is an aPL-independent phenomenon closely associated with the onset of the disease. Thrombosis occurs later in patients with aPL presence, which is likely an additional prothrombotic factor. B2-glycoprotein deficiency (mainly aPL antigen caused both by low production and consumption) is very common during the SARS-CoV2 infection and has been associated with a greater predisposition to COVID-19 complications. This could be a new prothrombotic mechanism that may be caused by the blockage of its physiological functions, the anticoagulant state being the most important.     

Expanding the landscape of biological computation with synthetic multicellular consortia

Computation is an intrinsic attribute of biological entities. All of them gather and process information and respond in predictable ways to an uncertain external environment. Are these computations similar to those performed by artificial systems? Can a living computer be constructed following standard engineering practices? Despite the similarities between molecular networks associated to information processing and the wiring diagrams used to represent electronic circuits, major differences arise. Such differences are specially relevant while engineering molecular circuits in order to build novel functionalities. Among others, wiring molecular components within a cell becomes a great challenge as soon as the complexity of the circuit becomes larger than simple gates. An alternative approach has been recently introduced based on a non-standard approach to cellular computation. By breaking some standard assumptions of engineering design, it allows the synthesis of multicellular engineered circuits able to perform complex functions and open a novel form of computation. Here we review previous studies dealing with both natural and synthetic forms of computation. We compare different systems spanning many spatial and temporal scales and outline a possible “space” of biological forms of computation. We suggest that a novel approach to build synthetic devices using multicellular consortia allows expanding this space in new directions.     

Creating a reference data set for the summarization of discussion forum threads

In this paper we address extractive summarization of long threads in online discussion fora. We present an elaborate user evaluation study to determine human preferences in forum summarization and to create a reference data set. We showed long threads to ten different raters and asked them to create a summary by selecting the posts that they considered to be the most important for the thread. We study the agreement between human raters on the summarization task, and we show how multiple reference summaries can be combined to develop a successful model for automatic summarization. We found that although the inter-rater agreement for the summarization task was slight to fair, the automatic summarizer obtained reasonable results in terms of precision, recall, and ROUGE. Moreover, when human raters were asked to choose between the summary created by another human and the summary created by our model in a blind side-by-side comparison, they judged the model’s summary equal to or better than the human summary in over half of the cases. This shows that even for a summarization task with low inter-rater agreement, a model can be trained that generates sensible summaries. In addition, we investigated the potential for personalized summarization. However, the results for the three raters involved in this experiment were inconclusive. We release the reference summaries as a publicly available dataset.     

Central Role of Dendritic Cells in Pulmonary Arterial Hypertension in Human and Mice

The pathogenesis of idiopathic pulmonary arterial hypertension (IPAH) is not fully understood, but evidence is accumulating that immune dysfunction plays a significant role. We previously reported that 31-week-old Tnfaip3^DNGR1-KO mice develop pulmonary hypertension (PH) symptoms. These mice harbor a targeted deletion of the TNFα-induced protein-3 (Tnfaip3) gene, encoding the NF-κB regulatory protein A20, specifically in type I conventional dendritic cells (cDC1s). Here, we studied the involvement of dendritic cells (DCs) in PH in more detail. We found various immune cells, including DCs, in the hearts of Tnfaip3^DNGR1-KO mice, particularly in the right ventricle (RV). Secondly, in young Tnfaip3^DNGR1-KO mice, innate immune activation through airway exposure to toll-like receptor ligands essentially did not result in elevated RV pressures, although we did observe significant RV hypertrophy. Thirdly, PH symptoms in Tnfaip3^DNGR1-KO mice were not enhanced by concomitant mutation of bone morphogenetic protein receptor type 2 (Bmpr2), which is the most affected gene in PAH patients. Finally, in human IPAH lung tissue we found co-localization of DCs and CD8+ T cells, representing the main cell type activated by cDC1s. Taken together, these findings support a unique role of cDC1s in PAH pathogenesis, independent of general immune activation or a mutation in the Bmpr2 gene.     

Electrochemical formation of a copolymer of 3-methoxyethoxythiophene and thiophene

Summary The electrochemical polymerization of 3-methoxyethoxythiophene yields to a polymer which is soluble in organic solvents. However, the solution is not stable in air. The blue solution, characteristic of the polymer in the doped state, turns to red due to the anion undoping process. We have found that this behaviour can be modified when a copolymerization is performed with thiophene; the copolymer is soluble in organic solvents and stable in air.