7,8-Dihydro-8-oxoguanosine Lesions Inhibit the Theophylline Aptamer or Change Its Selectivity

Aptamers are attractive constructs due to their high affinity/selectivity towards a target. Here 7,8-dihydro-8-oxoguanosine (8-oxoG) has been used, due in part to its unique H-bonding capabilities (Watson–Crick or Hoogsteen), to expand the “RNA alphabet”. Its impact on the theophylline RNA aptamer was explored by modifying its binding pocket at positions G11, G25, or G26. Structural probing, with RNases A and T₁, showed that modification at G11 leads to a drastic structural change, whereas the G25-/G26-modified analogues exhibited cleavage patterns similar to that of the canonical construct. The recognition properties towards three xanthine derivatives were then explored through thermophoresis. Modifying the aptamer at position G11 led to binding inhibition. Modification at G25, however, changed the selectivity towards theobromine (K_d≈160 μm ), with a poor affinity for theophylline (K_d>1.5 mm ) being observed. Overall, 8-oxoG can have an impact on the structures of aptamers in a position-dependent manner, leading to altered target selectivity.     

Formulation of a Biodegradable Detergent for Cleaning Oily Residues Generated during Industrial Processes

The use of toxic petroleum-based heavy oils is common in industrial processes. The cleaning of machines, equipment, and other surface covered in these oils is achieved with expensive products that are often also toxic and harmful to both the health of workers and the environment. The present paper proposes the development of a sustainable biodetergent made from plant-based materials. Tests were performed to determine the properties of the biodetergent in terms of its surfactant and emulsifying capacities, stability, toxicity, and the removal of heavy oil from glass plates and metallic surfaces. The formulation was composed of a natural solvent (cottonseed oil), a plant-based surfactant agent (saponin), and two natural stabilizers (carboxymethylcellulose and glycerine). The formulation was stable, nontoxic, and highly efficient, removing 100% of the heavy oil from glass and metallic surfaces. This solution developed in this study could be used in diverse industries with the need to clean machines and parts encrusted with oil and grease as well as the cleaning of floors covered with petroleum-based residues. A preliminary analysis of the economic feasibility of using the detergent was carried out at a Brazilian power plant. Besides the reduction in environmental impact due to the use of a nontoxic, biodegradable product as well as the reduction in health risks to workers associated with toxic cleaning products, this new product can have a considerable impact on the market as an environmentally friendly solution.     

Serological characterization and prevalence of spvR genes in Salmonella isolated from foods involved in outbreaks in Brazil

Salmonella strains (n = 75) isolated from foods involved in foodborne outbreaks occurred in Rio Grande do Sul State, Brazil, during 1999 and 2000 were studied. Strains were serotyped and submitted to PCR analysis to verify the prevalence of Salmonella plasmid virulence (spvR) regulatory gene. Among the 75 isolates, 73 (97%) were classified as Salmonella enterica serovar Enteritidis. All of the Salmonella strains isolated in 1999 were classified as serotype Enteritidis, whereas in 2000 two isolates were serotyped as Salmonella Derby and Salmonella Typhimurium. Regarding the prevalence of spvR gene, 62 strains (82.7%) were PCR positive, and a positive correlation (P < 0.05) between the strains of Salmonella Enteritidis and the presence of spvR gene was demonstrated, which suggests that this gene is a characteristic of the Salmonella Enteritidis analyzed.     

Effect of preheating on potato texture

Preheating potatoes at 50 to 80°C has a firming effect on the cooked potato tissue. This effect is particularly pronounced at a preheating temperature of 60 to 70°C followed by cooling. Several theories have been presented in the literature to explain this firming effect: retrogradation of starch, leaching of amylose, stabilization of the middle lamellae and cell walls by the activation of the pectin methylesterase (PME) enzyme, and by the release of calcium from gelatinized starch and the formation of calcium bridges between pectin molecules. Most probably, none of these theories alone can explain the phenomenon and more than one mechanism seems to be involved. Some of these mechanisms seem to be interdependent. As an example, calcium could be considered as a link all the way through release after starch gelatinization to cross‐linking pectin substances in the cell wall and the middle lamellae, which has been demethylated by the PME enzyme. More research and “clear cut” experiments are needed in order to elucidate the role of each mechanism, especially which of them is the main contributor to the process of firming. Most probably, the calcium‐pectin‐PME mechanism plays a secondary role, that is, it only retards the collapse of the tissue structure that would otherwise occur during the final heating without preheating, and it is not the main factor of firmness.     

Modeling bread baking with focus on overall deformation and local porosity evolution

A two dimensional model of bread baking was developed including, for the first time, the dependence of dough viscosity on both temperature and moisture content, the carbon dioxide dissolved from liquid water together with gas generation from yeast at the beginning of baking and the shrinkage due to dough drying. Particular attention was paid to experimental validation of both overall and local variables such as local temperature, overall mass loss, and local moisture content, overall CO₂ released into the oven, and overall deformation and local expansion or shrinkage. Sensitivity studies on generation of carbon dioxide, gravity, and shrinkage are presented to discuss their influences on bread geometry, porosity (reflecting the alveolar structure) and gas pressure. © 2016 American Institute of Chemical Engineers AIChE J, 62: 3847–3863, 2016     

Oil sorbers based on renewable sources and coffee grounds

This work presents useful composites for oil spill cleanup processes. These systems are composed of a polyester matrix loaded with coffee ground powder and maghemite. They were prepared by in situ polymerization. The aliphatic monomers proportion—castor oil and glycerin—was studied with the aim of understanding the effect of feed ratio on the product properties. The materials were studied using several techniques, including Fourier Transform Infrared Spectroscopy, Ultraviolet‐visible Spectrophotometry, and Wide Angle X‐ray Scattering, with magnetic force tests used for the characterization of materials. Density tests showed the presence of coffee grounds causes an important reduction in the density values of composites, improving their flotation. The interaction between composites and petroleum is more than twice that between composites and water. Moreover, for all magnetizable composites, the removal capability was (25.1 ± 1.2) g/g (petroleum/composite), allowing us to state that this is a promising material for use in oil spill cleanup processes. © 2015 Wiley Periodicals, Inc. J. Appl. Polym. Sci. 2016 , 133, 43127.     

Voltammetric stability of anodic films on the Ti6Al4V alloy in chloride medium

The biocompatibility and mechanical integrity of Ti and Ti6Al4V alloy can be affected by corrosion processes. This paper presents studies on the stability of anodic oxide films on Ti6Al4V and Ti in chloride medium. The oxides were grown potentiodynamically up to 8.0 V in the phosphate buffer saline (PBS) solution (pH 6.8) at 25 and 37 °C. The morphology of the obtained anodic oxides and the type of corrosion that occurred were analyzed by SEM–EDS. The Ti6Al4V alloy presented less corrosion resistance than pure Ti. Elemental analyses showed that the decrease of the alloy corrosion resistance is due mainly to the corrosion of Al.     

CD8+ T Cell Senescence: Lights and Shadows in Viral Infections,Autoimmune Disorders and Cancer

CD8⁺ T lymphocytes are a heterogeneous class of cells that play a crucial role in the adaptive immune response against pathogens and cancer. During their lifetime, they acquire cytotoxic functions to ensure the clearance of infected or transformed cells and, in addition, they turn into memory lymphocytes, thus providing a long-term protection. During ageing, the thymic involution causes a reduction of circulating T cells and an enrichment of memory cells, partially explaining the lowering of the response towards novel antigens with implications in vaccine efficacy. Moreover, the persistent stimulation by several antigens throughout life favors the switching of CD8⁺ T cells towards a senescent phenotype contributing to a low-grade inflammation that is a major component of several ageing-related diseases. In genetically predisposed young people, an immunological stress caused by viral infections (e.g., HIV, CMV, SARS-CoV-2), autoimmune disorders or tumor microenvironment (TME) could mimic the ageing status with the consequent acceleration of T cell senescence. This, in turn, exacerbates the inflamed conditions with dramatic effects on the clinical progression of the disease. A better characterization of the phenotype as well as the functions of senescent CD8⁺ T cells can be pivotal to prevent age-related diseases, to improve vaccine strategies and, possibly, immunotherapies in autoimmune diseases and cancer.     

Fibre-reinforced cemented soils compressive and tensile strength assessment as a function of filament length

This study aims to develop a dosage methodology based on tensile and compressive strength for artificially cemented fibre reinforced soils considering filament length. The controlling parameters evaluated were the fibre length (l), the cement content (C), the porosity (η) and the porosity/cement ratio (η/C_iv). A number of unconfined compression and split tensile tests were carried out in the present work. The results show that fibre insertion in the cemented soil, for the whole range of cement content studied, and the increase of reinforcement length improve unconfined compressive and split tensile strengths. It was shown that the porosity/cement ratio, in which volumetric cementitious material content is adjusted by an exponent (0.28 for all the fibre-reinforced and non-reinforced cemented soil mixtures) to end in unique correlations for each mixture, is a good parameter in the evaluation of the unconfined compressive and split tensile strength of the fibre-reinforced and non-reinforced cemented soil studied. Analysis of variance (ANOVA) performed on the results of a factorial experiment considering the effect of adjusted cement content, fibre length and porosity showed that all of these factors are significant in affecting the measured changes in split tensile and unconfined compressive strength values. Finally, unique dosage relationships could be achieved linking the unconfined compressive strength (q_u) and the split tensile strength (q_t) of the sandy soil studied with porosity/cement ratio (η/C_iv) and fibre length (l).