Thrombin-like enzyme from Lachesis muta muta venom: isolation and topographical analysis of its active site structure by means of the binding of amidines and guanidines as competitive inhibitors

A serine protease enzyme was purified from Lachesis muta muta venom, with 40% yield, by gel filtration on Sephadex G-100 and affinity chromatography on Sepharose-agmatin. Homogeneity of the enzyme preparation was demonstrated by sodium dodecyl sulfate polyacrylamide gel electrophoresis and the enzyme had a relative mol. wt of 45,000. The molar extinction coefficient at 280 nm was 62,127 (M x cm)-1. The enzyme hydrolysed Bz-Arg-Nan with Ks = 0.233 +/- 0.08 mM and kcat = 2.80 +/- 0.07 sec-1. All the amidines and guanidines tested for their inhibitory effect on thrombin-like enzyme behaved as competitive inhibitors of the enzyme with Ki values in the range 6.2 microM to 42.3 mM for amidines and 0.19 mM to 9.31 mM for guanidines. Dissociation constant values were analyzed in terms of the binding of the inhibitors with the subsite S1, the specificity pocket of the enzyme, Ki values were discussed in accordance with those for trypsin inhibition. beta-Naphthamidine was the strongest inhibitor, while guanidine was the weakest. The differences among the Ki values were interpreted in terms of the shape of the enzyme active site. For meta- and para-substituted benzamidinium ions a good correlation was found between log l/Ki and sigma Hammett values of the substituents. The substituent effects in the pi-electrons of the benzamidine ring were considered in the frame of Hückel molecular orbital theory. A model for the binding of p-benzamidine derivatives with the primary specificity S1 subsite of the enzyme active site was proposed.     

A shape analysis framework for neuromorphometry

This paper addresses in an integrated and systematic fashion the relatively overlooked but increasingly important issue of measuring and characterizing the geometrical properties of nerve cells and structures, an area often called neuromorphology. After discussing the main motivation for such an endeavour, a comprehensive mathematical framework for characterizing neural shapes, capable of expressing variations over time, is presented and used to underline the main issues in neuromorphology. Three particularly powerful and versatile families of neuromorphological approaches, including differential measures, symmetry axes/skeletons, and complexity, are presented and their respective potentials for applications in neuroscience are identified. Examples of applications of such measures are provided based on experimental investigations related to automated dendrogram extraction, mental retardation characterization, and axon growth analysis.     

基于DTW和改进匈牙利算法的句子语义相似度研究

句子语义相似度的研究在自然语言处理等领域发挥着重要的作用.针对现有汉语句子相似度研究中存在的语义特征难以分析以及语序影响的问题,提出了一种基于DTW和匈牙利算法相结合的语义句子相似度处理模型.模型首先使用Word2vec深度学习模型训练百度新闻语料,得到200维的包含语义特征的词向量词典,并建立词向量空间,根据词向量组...     

How to get residents/owners in housing cooperatives to agree on sustainable renovation

What factors increase the chance that residents/owners in housing cooperatives agree on sustainable energy efficient renovation? Based on 30 qualitative interviews with professional advisors in cooperative housing associations and chairman/board and residents in three chosen case studies, an analysis of opportunities and barriers for making a common decision on renovation is performed. Success criteria and barriers are found on the societal level as well as on the organizational/individual level. The barriers and success criteria identified on the societal level are: knowledge level on energy-efficient renovation among relevant actors, owner structure of the housing cooperative, and existing regulations and incentives. On the organizational and individual level, the following categories influencing renovation processes were identified: the time frame and organization of the process, understanding the residents` needs, economy, the information given, and the existence of available exemplary projects and role models. Based on the results of the study, ten guidelines that contribute to more successful decision making processes and increase the chances of sustainable energy efficient renovation in housing cooperatives are presented.     

Reinforcement of hydroxyapatite by adding P2O5-CaO glasses with Na2O, K2O and MgO

Commercial hydroxyapatite was reinforced by adding small amounts (2 and 4 wt%) of P₂O₅-based glasses during its sintering process. The composites prepared had a chemical composition closely related to the mineral part of bone tissues in terms of trace elements usually detected, such as Na, K and Mg. X-ray diffraction analysis (XRD) showed that the glass reinforced-HA composites were composed of a HA matrix and variable amounts of tricalcium phosphate phase, depending on sintering temperature and glass composition. These composites were shown to have much higher biaxial bending strength than sintered HA, 107 MPa for Ha/2% of 35P₂O₅-35CaO-10Na₂O-10K₂O-10MgO glass composite and 28 MPa for sintered HA. The presence of -tricalcium phosphate in the microstructure of the composites is an important factor in the reinforcement process.This paper was accepted for publication after the 1995 Conference of the European Society of Biomaterials, Oporto. Portugal, 10–13 September.     

Hydrogen adsorption on KOH activated carbons from mesophase pitch containing Si, B, Ti or Fe

Different activated carbons with large micropore volume (0.78-0.99 cm³/g) have been prepared by KOH activation of mesophase pitch obtained by co-pyrolysis of a petroleum residue and small amounts of different compounds, triphenylsilane, borane pyridine complex, tetrabutyl orthotitanate or ferrocene. During the preparation, the Ti introduced in the petroleum residue concentrate into the activated carbon, whereas some loss of Si and Fe occurs. The compounds modify the size of mesophase structure formed during the co-pyrolysis process, as well as the apparent height of lamelae stack, L_c, both having an important effect in the development of the porosity of the activated carbon. However, there is a scarce influence of all heteroatoms in the adsorption capacity of H₂ at −196 °C and at 25 °C, which seems to be mainly influenced by the volume and size of micropores of the activated carbon. Only the activated carbon containing Fe adsorbs a higher amount of hydrogen at 25 °C and 10 MPa than the expected one according to its micropore volume.     

Phase transformation and microstructural evolution after heat treatment of a terbium-doped lithium–aluminum phosphate glass

The crystallization kinetics and phase transformation of a transparent Tb³⁺-doped lithium–aluminum phosphate glass, prepared by melt quenching, were investigated. The energy associated to the glass transition and the crystallization parameters (activation energy for crystallization and Avrami exponent) were evaluated by different methods using the experimental data obtained by differential thermal analysis performed at different heating rates. Using an isoconversional method to determine the change of the activation energy for crystallization with the fraction of crystallization, it was verified that with the increase in the fraction of crystallization from 0.1 to 0.9, the value of the activation energy decreased slightly from ~370 to ~310 kJ mol^?1 and that the Avrami exponent varied from 0.8 to 1, suggesting a surface crystal growth mechanism. Observation of the microstructural evolution of heat-treated glass samples confirmed a surface crystallization process revealing spherulitic crystals constituted mainly by aluminum metaphosphate.     

Correlates of physical activity in a national sample of girls and boys in Grades 4 through 12.

Psychological, biological, social, and physical environmental variables were examined for their association with physical activity of young people. A national sample of 1,504 parents and children in Grades 4–12 were interviewed by telephone. Twenty-two potential determinants were assessed along with an 11-item child physical activity index (α?=?.76). Hierarchical multiple regressions were conducted separately for 6 age–sex subgroups. Percentage of variance explained ranged from 18% for boys in Grades 4–6 to 59% for girls in Grades 10–12. Three variables had strong and consistent associations with the child physical activity index that generalized across subgroups: use of afternoon time for sports and physical activity, enjoyment of physical education, and family support for physical activity. These 3 variables should be targeted for change to promote physical activity in all groups of young people. (PsycINFO Database Record (c) 2010 APA, all rights reserved)