Staphylococcus aureus Exfoliative Toxin E,Oligomeric State and Flip of P186: Implications for Its Action Mechanism

Staphylococcal exfoliative toxins (ETs) are glutamyl endopeptidases that specifically cleave the Glu381-Gly382 bond in the ectodomains of desmoglein 1 (Dsg1) via complex action mechanisms. To date, four ETs have been identified in different Staphylococcus aureus strains and ETE is the most recently characterized. The unusual properties of ETs have been attributed to a unique structural feature, i.e., the 180° flip of the carbonyl oxygen (O) of the nonconserved residue 192/186 (ETA/ETE numbering), not conducive to the oxyanion hole formation. We report the crystal structure of ETE determined at 1.61 Å resolution, in which P186(O) adopts two conformations displaying a 180° rotation. This finding, together with free energy calculations, supports the existence of a dynamic transition between the conformations under the tested conditions. Moreover, enzymatic assays showed no significant differences in the esterolytic efficiency of ETE and ETE/P186G, a mutant predicted to possess a functional oxyanion hole, thus downplaying the influence of the flip on the activity. Finally, we observed the formation of ETE homodimers in solution and the predicted homodimeric structure revealed the participation of a characteristic nonconserved loop in the interface and the partial occlusion of the protein active site, suggesting that monomerization is required for enzymatic activity.     

The polymerization of acenaphthylene by sulphuric acid in methylenedichloride

Summary Acenaphthylene was polymerized in methylenedichloride at 273, 291 and 308 K by sulphuric acid. The initiation step takes place by addition of the proton of sulphuric acid to the monomer. The propagation step is through ion-pairs, and the propagation constants are first-order with respect to the monomer and initiator(k_p = 0.22 M^–1. s^–1(273K), k_p=0.88 M^–1. s^–1(291K), k_p = 2.81 M^–1. s^–1 (308K)). There is not appreciable loss of active centres, being this confirmed by experiments carried out with succesive additions of monomer. The molecular weights obtained confirm the importance of processes to monomer in this polymerization.     

Integration of enterprise levels based on an ontological framework

Enterprises are highly complex systems in which one or more organizations share a definite mission, goals and objectives to offer a product or service. In this study, an ontological framework is built as a mechanism for exchanging information and knowledge models for multiple applications and effective integration between hierarchical levels. The potential of the general semantic framework that is developed is demonstrated using a case study concerning the enterprise supply chain network design-planning problem.     

Application of FTIR spectroscopy to determine transport properties and water-polymer interactions in polypropylene (PP)/poly(ethylene-co-vinyl alcohol) (EVOH) blend films: Effect of poly(ethylene-co-vinyl alcohol) content and water activity

This paper reports the use of FTIR spectroscopy along with gravimetric analysis to simultaneously study water sorption, transport properties and water-polymer interactions in PP/EVOH films at 25 °C, as a function of EVOH content and water vapour activity. The results indicate the existence of two different mechanisms, below (dual-mode) and above a critical concentration value close to the clustering limit activity. Several spectroscopically distinguishable “types” of sorbed water molecules with different diffusion rates have been detected, and their evolution as a function of the penetrant concentration followed. The main changes in the water structure take place from the clustering limit activity onwards. Significant differences both in the state of water and diffusion sequence of free/bound water have been found between 90/10 PP/EVOH films and blends with EVOH content ≥20%, suggesting not only composite-dependence but also morphology-dependence.     

Extraction and characterization of soluble protein fractions from Phaseolus lunatus L seeds

Legume proteins as a potential source of valuable nutrients, are the object of several studies in order to obtain the best use. A basic knowledge becomes more important for those proteins from species not wholly utilized, before using them as food ingredients. The objective of this work was to determine several structural and nutritional characteristics of the protein fractions from Phaseolus lunatus, separated in different solvents. The relative amount of extraction for the albumins (ALB), globulins (GLB), prolamines (PRL), and glutelins (GLT) was 62.3, 34.8, 1.4 and 1.5%, respectively. The SDS-PAGE electrophoretic profile of both ALB and GLB, showed seven common bands in intervals from 10 to 95 kDa, and 14 to 99 kDa, respectively; the amino acids profile showed that PRL was the rich fraction in sulfurated amino acids (11.5 g/100 g protein); the content of lysine in the fraction of ALB was smaller than expected but the requirement of the FAO in the fractions of GLB and GLT was covered. In general, the fraction of GLB had the best balance of amino acids and digestibility (80%); however, it had a relationship of calculated protein efficiency ratio (C-PER) of 0.11, smaller than the ratio in ALB (0.97). The calorimetric analysis showed denatured temperatures around 90 degrees C for the ALB, GLB, and GLU fractions. The PRL fraction probably did not present a thermal transition because the proteins were denaturalized by the extraction conditions.     

Flexible oligomeric silicon-containing poly(ether-azomethine)s obtained from epoxide derivatives. Synthesis and characterization

Three new diamines derived from epoxide compounds were synthesized. The preparation of diamine monomers implied the reaction between a phenoxyalkyloxirane (alkyl: H, methyl, isopropyl) and bisphenol A, obtaining the respective aliphatic diols, which produced the corresponding dinitro derivatives. Finally, these derivatives were reduced by using palladium/carbon activated as catalyst and hydrazine as a hydrogen source. Then, six oligomeric poly(ether-azomethine)s (PEAzMs) were obtained from a polycondensation reaction between the new diamines and bis(4-formylbiphenyl-4-yl)dialkylsilane (alkyl: methyl, phenyl) with 84–93% yields. The structural characterization of the diamines and PEAzMs was performed by elemental analysis, infrared spectroscopy, and nuclear magnetic resonance spectroscopy (¹H, ¹³C, and ²⁹Si). Furthermore, polymers were analyzed by solubility tests, gel permeation chromatography, ultraviolet–visible (UV–vis) spectroscopy, thermogravimetry, and differential scanning calorimetry analysis. The results showed PEAzMs with 2–11 repetitive units, where the design of the monomers allowed to obtain improved solution processability in comparison with previously reported silylated poly(azomethine)s and good thermal stability. Additionally, all samples showed high transparency in the UV–vis region. © 2019 Wiley Periodicals, Inc. J. Appl. Polym. Sci. 2019 , 136, 48055.     

Novel Self‐Reinforced Films Based on Poly (3‐Hydroxybutyrate‐Co‐3‐Hydroxyvalerate) (PHBV) and PHBV Microparticles

Biodegradable self‐reinforced films of poly (3‐hydroxybutyrate‐co‐3‐hydroxyvalerate) (PHBV) and PHBV microparticles were prepared through the solvent casting method (srPHBV). Differential scanning calorimetry (DSC), wide angle X‐ray scattering (WAXS) and polarized optical microscopy results confirmed the nucleating effect of PHBV microparticles. WAXS proved that diffractograms of PHBV and srPHBV‐6 films at room temperature contain the main characteristic diffraction peaks of an orthorhombic α‐type crystalline structure. Small angle X‐ray scattering (SAXS) showed a similar decrement rate of long spacing in PHBV and srPHBV films. SAXS/WAXS data revealed that when the amount of filler was increased, lamellae thickness grew. Transmission electron microscopy images illustrated well filler dispersion in the srPHBV films. Scanning electron microscopy results exhibited a significant reduction in porosity for srPHBV films once the PHBV microparticles were added. Atomic force microscopy analysis showed higher surface roughness after filler incorporation. Samples of srPHBV films showed higher barrier properties against water vapor, oxygen, and carbon dioxide. Combined properties of srPHBV films revealed the possibility of being suitable candidates for food packaging applications. POLYM. ENG. SCI., 59:E120–E128, 2019. © 2018 Society of Plastics Engineers     

Comparison of a pair of synthetic tea-catechin-derived epimers: synthesis, antifolate activity, and tyrosinase-mediated activation in melanoma

Despite bioavailability issues, tea catechins have emerged as promising chemopreventive agents because of their efficacy in various animal models. We synthesized two catechin-derived compounds, 3-O-(3,4,5-trimethoxybenzoyl)-(-)-catechin (TMCG) and 3-O-(3,4,5-trimethoxybenzoyl)-(-)-epicatechin (TMECG), in an attempt to improve the stability and cellular absorption of tea polyphenols. The antiproliferative and pro-apoptotic activities of both compounds were analyzed with various cancer cell systems, and TMCG, which was easily synthesized in excellent yield, was more active than TMECG in both melanoma and non-melanoma cell lines. TMCG was also a better inhibitor of dihydrofolate reductase and was more efficiently oxidized by tyrosinase, potentially explaining the difference in activity between these epimers.     

Fabrication of HfO2 patterns by laser interference nanolithography and selective dry etching for III-V CMOS application

Nanostructuring of ultrathin HfO2 films deposited on GaAs (001) substrates by high-resolution Lloyd's mirror laser interference nanolithography is described. Pattern transfer to the HfO2 film was carried out by reactive ion beam etching using CF4 and O2 plasmas. A combination of atomic force microscopy, high-resolution scanning electron microscopy, high-resolution transmission electron microscopy, and energy-dispersive X-ray spectroscopy microanalysis was used to characterise the various etching steps of the process and the resulting HfO2/GaAs pattern morphology, structure, and chemical composition. We show that the patterning process can be applied to fabricate uniform arrays of HfO2 mesa stripes with tapered sidewalls and linewidths of 100 nm. The exposed GaAs trenches were found to be residue-free and atomically smooth with a root-mean-square line roughness of 0.18 nm after plasma etching.PACS: Dielectric oxides 77.84.Bw, Nanoscale pattern formation 81.16.Rf, Plasma etching 52.77.Bn, Fabrication of III-V semiconductors 81.05.Ea.     

Hysteresis loops of individual Co nanostripes measured by magnetic force microscopy

High-resolution magnetic imaging is of utmost importance to understand magnetism at the nanoscale. In the present work, we use a magnetic force microscope (MFM) operating under in-plane magnetic field in order to observe with high accuracy the domain configuration changes in Co nanowires as a function of the externally applied magnetic field. The main result is the quantitative evaluation of the coercive field of the individual nanostructures. Such characterization is performed by using an MFM-based technique in which a map of the magnetic signal is obtained as a function of both the lateral displacement and the magnetic field.