Successive Approximation Linear Quadratic Regulator for Estuarine Management Problem

A successive approximation linear quadratic regulator (SALQR)method is applied to solve estuarine management problems to determine the optimal amount of freshwater inflows into baysand estuaries to maximize fishery harvests. Fishery harvests areexpressed in regression equations as functions of freshwaterinflows. The optimization problem is posed as a discrete-timeoptimal control problem in which salinity represents the statevariable and freshwater inflow represents the control variable. A two-dimensional hydrodynamic-salinity transport model, HYD-SAL,is used as the transition to simulate the flow circulation andtemporal and spatial salinity pattern in an estuary system. Thebound constraints for the control and state variables areincorporated into the objective function using a penalty functionmethod to convert the problem into an unconstrained formulation. The SALQR method is applied to the Lavaca-Tres Palacios Estuaryin Texas and the results are compared with those of usingregression equations as the transition equations.     

A persistent store for large shared knowledge bases

A knowledge-base management system (KBMS) with the following goals is proposed: (1) to allow a knowledge engineer to update a knowledge base and have these updates persist on secondary storage, (2) to allow multiple knowledge engineers to have shared access to a knowledge base and modify the knowledge base concurrently, and (3) to maintain consistency of the shared knowledge base as it evolves. At the heart of the KBMS is the version store, which is a persistent storage structure that maintains multiple versions of a knowledge base. Retrieve and update operations are defined on the version store to efficiently access and modify any version. Objects in the version store are clustered to support efficient access of an entire version or some subparts of it. To store the effects of an update requires space proportional to the size of the update and which is independent of the size of the knowledge base. The additional cost of maintaining multiple versions is within a small constant factor of maintaining a single version     

Synthesis of “simple graft” poly(isoprene-g-styrene) by anionic polymerization

Summary The synthesis of a well-defined near-monodisperse polyisoprene-graft-polystyrene copomymer having a single, centrally located graft site is described. The method utilized to prepare this structure involved capping living polystyryllithium anions by reaction with methyltriclorosilanne, followed by addition of a slight stoichiometric excess of polyisoprenyllithium. After linking, the residual polyisoprene arms were removed by fractionation to yield the pure graft copolymer.     

Macromolecular architectures by living and controlled/living polymerizations

The discovery of living anionic polymerization by Szwarc 50 years ago opened the way to the synthesis of model polymers. This ground-breaking discovery inspired many researchers to develop controlled/living routes for a plethora of monomers including those not compatible with anionic polymerization. These methods and their combinations serve as an arsenal for the synthesis of well-defined polymeric materials with predetermined properties and a rich variety of applications. A few representative examples of living and controlled/living methodologies for the synthesis of polymers with different macromolecular architectures are presented in this review.     

Grafting reactions of living macroanions with multi-walled carbon nanotubes

Grafting reactions of living polystyryllithium (PSLi) with acid chloride containing multi-walled carbon nanotubes (MWNTs-COCI) were performed under vacuum in benzene at room temperature. Covalent grafting of polystyrene (PS) was characterized using spectroscopic, microscopic, and thermogravimetric analyses. Grafting at different ratios of macroanion to acylchloride of the carbon nanotubes showed that the grafting efficiency was not dependent on the concentration of the macroanions. The mole percent of PS present in the MWNTs-g-PS samples was inversely proportional to the precursor molecular weight of PSLi. Direct reactions of PSLi, polybutadienyllithium and n-butyllithium with pristine MWNTs without any functional groups were also performed in the presence and in the absence of tetrahydrofuran in benzene. The grafting reactions of living macroanions either with MWNTs-COCl or with pristine MWNTs indicated a partial grafting of polymer on the carbon nanotubes in benzene at room temperature.     

The Lrat−/− Rat: CRISPR/Cas9 Construction and Phenotyping of a New Animal Model for Retinitis Pigmentosa

Purpose: We developed and phenotyped a pigmented knockout rat model for lecithin retinol acyltransferase (LRAT) using CRISPR/Cas9. The introduced mutation (c.12delA) is based on a patient group harboring a homologous homozygous frameshift mutation in the LRAT gene (c.12delC), causing a dysfunctional visual (retinoid) cycle. Methods: The introduced mutation was confirmed by DNA and RNA sequencing. The expression of Lrat was determined on both the RNA and protein level in wildtype and knockout animals using RT-PCR and immunohistochemistry. The retinal structure and function, as well as the visual behavior of the Lrat^−/− and control rats, were characterized using scanning laser ophthalmoscopy (SLO), optical coherence tomography (OCT), electroretinography (ERG) and vision-based behavioral assays. Results: Wildtype animals had high Lrat mRNA expression in multiple tissues, including the eye and liver. In contrast, hardly any expression was detected in Lrat^−/− animals. LRAT protein was abundantly present in wildtype animals and absent in Lrat^−/− animals. Lrat^−/− animals showed progressively reduced ERG potentials compared to wildtype controls from two weeks of age onwards. Vison-based behavioral assays confirmed reduced vision. Structural abnormalities, such as overall retinal thinning, were observed in Lrat^−/− animals. The retinal thickness in knockout rats was decreased to roughly 80% by four months of age. No functional or structural differences were observed between wildtype and heterozygote animals. Conclusions: Our Lrat^−/− rat is a new animal model for retinal dystrophy, especially for the LRAT-subtype of early-onset retinal dystrophies. This model has advantages over the existing mouse models and the RCS rat strain and can be used for translational studies of retinal dystrophies.     

Using gene expression to assess the status of fish from anthropogenically influenced estuarine wetlands

The diverse mixture of contaminants frequently present in estuaries complicates their assessment by routine chemical or biological analyses. We investigated the use of gene expression to assess contaminant exposure and the condition of southern California estuarine fish. Liver gene expression, plasma estradiol concentrations, and gonad histopathology were used to study biological condition in longjaw mudsuckers (Gillichthys mirabilis). Metals, legacy organochlorine pesticides, PCBs, and contaminants of emerging concern were detected in sediments and whole fish. Overall gene expression patterns were characteristic to each of four sites investigated in this study. Differentially expressed genes belonged to several functional categories including xenobiotic metabolism, detoxification, disease, and stress responses. In general, plasma estradiol concentrations were similar among fish from all areas. Some fish gonads had pathologic changes (e.g., infection, inflammation) that could indicate weakened immune systems and chronic stress. The differential expression of some genes involved in stress responses correlated with the prevalence of histologic gonad lesions. This study indicates that gene expression is a promising tool for assessing the biological condition of fish exposed to environmental contaminants.