Connective Ethnography for the Exploration of e-Science

E-science comprises diverse sites, connected in complex and heterogeneous ways. While ethnography is well established as a way of exploring the detail of the knowledge production process, some strategic adaptations are prompted by this spatial complexity of e-science. This article describes a study that focused on the biological discipline of systematics, exploring the ways in which use of a variety of information and communication technologies has become a routine part of disciplinary practice. The ethnography combined observation and interviews within systematics institutions with mailing list participation, exploration of web landscapes, and analysis of expectations around information and communications technologies as portrayed in policy documents. Exploring connections among these different activities offers a means of understanding multiple dimensions of e-science as a focus of practice and policy. It is important when studying e-science to engage critically with claims about the transformative capacity of new technologies and to adopt methodologies that remain agnostic in the face of such claims: A connective approach to ethnography offers considerable promise in this regard.     

Pyruvate improves myocardial tolerance to reperfusion injury by acting as an antioxidant: a chemiluminescence study

The utilization of various substrates by sperm from the cauda epididymidis of the tammar was examined because the major naturally occurring sugar in the semen of this species is N-acetyl-D-glucosamine (NAG) and not furctose, as in eutherian mammals. The sperm displayed a high level of endogenous respiration that supported motility for relatively prolonged periods of time in vitro. They also metabolised exogenous 14C-labelled glucose, NAG, sucrose, and acetate through glycolytic and/or oxidative processes to produce lactate and 14CO2 at varying rates. The rate of uptake of NAG by tammar sperm was about four times greater than that of other substrates. Glucose and/or NAG stimulated the rate of oxygen consumption by about 20%, but acetate stimulated oxygen consumption by more than 40%. The most striking findings were that NAG almost completely inhibited the oxidation of glucose and sucrose by the sperm and depressed the uptake of glucose, 3-O-methylglucose, and sucrose. Acetate oxidation also was inhibited by NAG, but only by about 50%. Tammar sperm generated substantial amounts of free glucose during incubation with NAG, but this and the inhibitory effects of NAG on glucose oxidation were not mimicked by rat sperm. It is proposed that tammar sperm fail to oxidise glucose in the presence of NAG because of the rapid cellular uptake of NAG relative to glucose. Also, the intracellular glucose and acetate liberated from NAG would compete with exogenous glucose for processing in the Embden-meyerhof and tricarboxylic acid (TCA) cycle pathways. It is also suggested that tammar sperm oxidise sucrose after extracellular hydrolysis into its glucose and fructose components. The biological implications of these metabolic and transport properties of tammar sperm have as yet to be determined.     

Degradation reduction in optics imagery using Toeplitz structure

This paper is concerned with improvement in optical image quality by image restoration. Image restoration is an ill-posed inverse problem which involves the removal or minimization of degradations caused by noise and blur in an image, resulting from, in this case, imaging through a medium. Our work here concerns the use of the underlying Toeplitz structure of such problems, and associated techniques for accelerating the convergence of iterative image restoration computations. Denoising methods, including total variation minimization, followed by segmentation-based preconditioning methods for minimum residual conjugate gradient iterations, are investigated. Regularization is accomplished by segmenting the image into (smooth) segments and varying the preconditioners across the segments. By taking advantage of the Toeplitz structure, our algorithms can be implemented with computational complexity of onlyO (ln ² logn), wheren ² is the number of pixels in the image andl is the number of segments used. Also, parallelization is straightforward. Numerical tests are reported for atmospheric imaging problems, including the case of spatially varying blur. Research supported in part by a National Science Foundation Postdoctoral Research Fellowship. Research sponsored by the U.S. Air Force Office of Scientific Research under grant F49620-97-1-1039. Research sponsored by the U.S. Air Force Office of Scientific Research under grant F49620-97-1-0139, and by the National Science Foundation under grant CCR-96-23356. Research sponsored by the National Science Foundation under grant CCR-96-23356.     

Analyzing subjectivity in therapeutic discourse: Rogers, Perls, Ellis, and Gloria revisited.

Analyzed the film Three Approaches to Psychotherapy (E. L. Shostrom, 1966), which depicts C. Rogers (client-centered therapy), A. Ellis (rational-emotive therapy), and F. S. Perls (Gestalt therapy) interviewing the same client, Gloria. Verbal exchanges between participants were analyzed, using T. S. Essig and R. L. Russell's (1988) categories for analyzing psychological relations between subjects and events in discourse. Predictable patterns in how therapists of different theoretical orientations represent subjectivity in discourse can be screened with these categories. Classification categories are appended. (PsycINFO Database Record (c) 2010 APA, all rights reserved)     

SeaDoc: a self-adaptive document link provision system for framework extension tasks

It has been demonstrated that object-oriented frameworks can bring all kinds of advantages to application developers. To gain the advantages, application developers have to follow the framework-based development process. One step of the process is to integrate new components for framework extension. This is defined as a framework extension task in this work. In this task, application developers have to (1) retrieve examples, (2) acquire necessary documents, which are defined as the documents containing example adaptation information, and (3) adapt examples. Currently, acquiring necessary documents requires a lot of time because it is achieved through manually searching the Internet. Although there are many approaches to correctly acquiring those documents, the focus is never on time reduction. To satisfy the new criterion, we find the following challenging issues: (1) the dynamics of the valid document version, and (2) the uncertainty of the relevant necessary documents. The first issue is that the valid document version varies according to the framework version under which the retrieved example is workable. The second one is that the relevant necessary documents cannot be decided until a specific necessary document is specified. To resolve those two issues, a Self-adaptive Document link provision system, named SeaDoc, is provided in this work. SeaDoc resolves the dynamics by dynamically constructing document links with the corresponding valid document version. SeaDoc also resolves the uncertainty by adaptively selecting highly relevant document links. The experimental results show that SeaDoc reduces the time by 73 and 83 % compared with other two approaches.     

A generalist herbivore in a specialist mode Metabolic,sequestrative, and defensive consequences

Adults of a generalist herbivore, the lubber grasshopper,Romalea guttata, can be converted to functional specialists by feeding them exclusively on catnip,Nepeta cataria. No obvious adverse effects on adult development resulted from this enforced monophagy. Notwithstanding the fact thatR. guttata has had no coevolutionary relationship with this Eurasian mint, it readily sequesters compounds that are identical to or derived from the terpenoid lactones that are characteristic ofN. cataria. R. guttata appears to both biomagnify minor allelochemicals and to sequester metabolites of theNepeta terpenes in its paired defensive glands. The levels of autogenously produced phenolics are not affected by feeding onN. cataria and the defensive secretions of catnip-fed grasshoppers are more repellent to ants than those of wild-fed acridids. Metabolites of theN. cataria monoterpenes are sequestered in the defensive glands when catnip is added to the natural diet ofR. guttata. The ability of a generalist,R. guttata, to facilely bioaccumulate a potpourri of foreign allelochemicals when feeding in a specialist mode is analyzed in terms of its biochemical, physiological, and functional significance. Sequestration is examined as a response to the enteric effronteries represented by the phytochemicals that can be characteristic of the overload in a monophagous diet.     

Feature extraction of the first difference of EMG time series for EMG pattern recognition

This paper demonstrates the utility of a differencing technique to transform surface EMG signals measured during both static and dynamic contractions such that they become more stationary. The technique was evaluated by three stationarity tests consisting of the variation of two statistical properties, i.e., mean and standard deviation, and the reverse arrangements test. As a result of the proposed technique, the first difference of EMG time series became more stationary compared to the original measured signal. Based on this finding, the performance of time-domain features extracted from raw and transformed EMG was investigated via an EMG classification problem (i.e., eight dynamic motions and four EMG channels) on data from 18 subjects. The results show that the classification accuracies of all features extracted from the transformed signals were higher than features extracted from the original signals for six different classifiers including quadratic discriminant analysis. On average, the proposed differencing technique improved classification accuracies by 2–8%.     

Design and Control of a Hyper-Redundant Manipulator for Mobile Manipulating Unmanned Aerial Vehicles

Manipulating objects using arms mounted to unmanned aerial vehicles (UAVs) is attractive because UAVs may access many locations that are otherwise inaccessible to other mobile manipulation platforms such as ground vehicles. Despite recent work, several major challenges remain to be overcome before it will be practical to manipulate objects from UAVs. Among these challenges are: (a) The constantly moving UAV platform and compliance of manipulator arms make it difficult to position the UAV and end-effector relative to an object of interest precisely enough for manipulation, and (b) The motions of the manipulator impact the stability of the host UAV, further complicating positioning. Solving these challenges will bring UAVs one step closer to being able to perform meaningful tasks such as infrastructure repair, disaster response, casualty extraction, and cargo resupply. Toward solutions to these challenges, this paper describes a hyper-redundant manipulator, manipulator control approaches and system design considerations to position the manipulator relative to objects of interest in such a way that impacts on platform stability are minimized.     

The cholesterol-lowering effect of guar gum is not the result of a simple diversion of bile acids toward fecal excretion

The effects of partially hydrolyzed, nonviscous, guar gum (PHGG) on cholesterol metabolism and digestive balance have been compared with those of native guar gum (GUAR) in rats adapted to 0.4% cholesterol diets. Both types of guar gum elicited acidic fermentations in the large intestine, but only GUAR effectively lowered plasma cholesterol (P<0.001), chiefly in the triglyceride-rich lipoprotein fraction. The biliary bile acid excretion was significantly enhanced in rats fed GUAR (P<0.05), as well as the intestinal and cecal bile acid pool (P<0.001). In rats fed GUAR and to a lesser extent in those fed PHGG, the fecal excretion of bile acids and neutral sterol was higher than in controls (P<0.01). The digestive balance (cholesterol intake-steroid excretion) was positive in control rats (+47 μmol/d), whereas it was negative in rats fed GUAR (−20 μmol/d), which could involve a higher rate of endogenous cholesterol synthesis. In rats fed PHGG, the steroid balance remained slightly positive. Liver 3-hydroxy-3-methylglutaryl-CoA (HMG-CoA) reductase activity was very low (22 pmol/min/mg protein), owing to cholesterol supplementation, in control rats or in rats fed PHGG, whereas it was markedly higher (+463%) in rats fed GUAR. In conclusion, even if PHGG does alter some parameters of the enterohepatic cycle of cholesterol and bile acids, its effects are not sufficient to elicit a significant cholesterol-lowering effect. The intestinal (ileal or cecal) reabsorption of bile acids was not reduced, but rather increased, by GUAR; nevertheless the intestinal capacities of reabsorption were overwhelmed by the enlargement of the digestive pool of bile acids. In the present model, induction of HMG-CoA reductase probably takes place in the presence of elevated portal bile acid concentrations.     

Determining Geographic Vulnerabilities Using a Novel Impact Based Resilience Metric

Various natural and man-made disasters as well as major political events (like riots) have increased the importance of understanding geographic failures and how correlated failures impact networks. Since mission critical networks are overlaid as virtual networks over a physical network infrastructure forming multilayer networks, there is an increasing need for methods to analyze multilayer networks for geographic vulnerabilities. In this paper, we present a novel impact-based resilience metric. Our new metric uses ideas borrowed from performability to combine network impact with state probability to calculate a new metric called Network Impact Resilience. The idea is that the highest impact to the mission of a network should drive its resilience metric. Furthermore, we present a state space analysis method that analyzes multilayer networks for geographic vulnerabilities. To demonstrate the methods, the inability to provision a given number of upper layer services is used as the criteria for network failure. Mapping techniques for multilayer network states are presented. Simplifying geographic state mapping techniques to reduce enumeration costs are also presented and tested. Finally, these techniques are tested on networks of varying sizes.