A bacteriophage reagent for Salmonella: molecular studies on Felix 01

Felix 01 (F01) is a bacteriophage originally isolated by Felix and Callow which lyses almost all Salmonella strains and has been widely used as a diagnostic test for this genus. Molecular information about this phage is entirely lacking. In the present study, the DNA of the phage was found to be a double-stranded linear molecule of about 80 kb. 11.5 kb has been sequenced and in this region A + T content is 60%. There are relatively few restriction endonuclease cleavage sites in the native genome and clones show this is due to their absence rather than modification. A restriction map of the genome has been constructed. The ends of the molecule cannot be ligated although they contain 5' phosphates. At least 60% of the genome must encode proteins. In the sequenced portion, many open reading frames exist and these are tightly packed together. These have been examined for homology to published proteins but only 1 to 17 shows similarity to known proteins. F01 is therefore the prototype of a new phage family. On the basis of restriction sites, codon usage and the distribution of nonsense codons in the unused reading frames, a strong case can be made for natural selection that reacts to mRNA structure and function.     

Assessment of the Wiener-Retinex process

We assess the performance of the Retinex transformation, the Wiener restoration, and the combined Wiener-Retinex process in the context of the end-to-end model of color visual-communication channels for near-surface acquisition. We extend the formulations of panchromatic imaging for the nonlinear Retinex transformation and the linear Wiener and Wiener-Retinex restoration filters to color imaging. We further assess the accuracy by which colors are restored in the cases of uniform and spatially varying irradiance levels, and the shadow depth for which color consistency is still possible with reasonable accuracy. Finally, we assess the sensitivity of these processes to perturbations in the visual channel, including the image-gathering design and the spatial support of the Retinex transformation.     

Procedural justice, stress appraisal, and athletes' attitudes.

In this study the authors examined a model in which procedural justice may serve as an external-situational resource that improves athletes' appraisals of stress and enhances their attitudes toward their team. Eighty-one Israeli male athletes were questioned on the degree of procedural justice employed on their team, how they appraised stress, and their attitudes toward their team. Results showed that higher procedural justice was associated with more positive appraisals of stress as a challenge and greater team loyalty and commitment and that the relationship of procedural justice to team commitment and loyalty was mediated by how stress is appraised. Findings integrate the cognitive-phenomenological model of stress/coping with the relational factors of the procedural justice approach and extend their validity to the field of sport. (PsycINFO Database Record (c) 2010 APA, all rights reserved)     

Radiosity for dynamic scenes in flatland with the visibility complex

The radiosity method is particularly suitable for global illumination calculations in static environments. Nonetheless, recent applications of image synthesis such as architectural simulation or lighting design require the ability to modify environments. Previous methods have attempted to deal with dynamic environments (environments where the geometry, the material properties, etc., can change)but still suffer some limitations in the case of moving objects. One of the main problems remaining is the efficient and accurate detection of which form factors must really be recomputed, since their calculation is the most time-consuming part of the radiosity method. To correctly understand and solve this problem, we start with a method in 2D for polygonal scenes using the visibility complex. It is a powerful data structure representing the visibility relationships between objects in the plane. We have developed and implemented an algorithm which uses this structure to efficiently compute the discontinuity mesh and the form factors for static scenes. We also propose an extension to our algorithm to efficiently update only the modified form factors when an object is moving. This approach enhances our understanding and will hopefully lead to efficient solutions in 3D.     

Introduction to the Geometer’s Angle

Geometer Rachel Fletcher introduces the Geometer’s Angle, a column in the Nexus Network Journal dedicated to geometrical constructions, the procedures for drawing them, their use, significance and symbolism.