Technique of checking missed eigenvalues for eigenproblem with damping matrix

In the case of the non‐proportionally damped system such as the soil–structure interaction system, the structural control system and composite structures, the eigenproblem with the damping matrix should be necessarily performed to obtain the exact dynamic response. However, most of the eigenvalue analysis methods such as the subspace iteration method and the Lanczos method may miss some eigenvalues in the required ones. Therefore, the eigenvalue analysis method must include a technique to check the missed eigenvalues to become the practical tools. In the case of the undamped or proportionally damped system the missed eigenvalues can easily be checked by using the well‐known Sturm sequence property, while in the case of the non‐proportionally damped system a checking technique has not been developed yet. In this paper, a technique of checking the missed eigenvalues for the eigenproblem with the damping matrix is proposed by applying the argument principle. To verify the effectiveness of the proposed method, two numerical examples are considered. Copyright © 2001 John Wiley & Sons, Ltd.     

Effects and Mechanism of Particulate Matter on Tendon Healing Based on Integrated Analysis of DNA Methylation and RNA Sequencing Data in a Rat Model

Exposure to particulate matter (PM) has been linked with the severity of various diseases. To date, there is no study on the relationship between PM exposure and tendon healing. Open Achilles tenotomy of 20 rats was performed. The animals were divided into two groups according to exposure to PM: a PM group and a non-PM group. After 6 weeks of PM exposure, the harvest and investigations of lungs, blood samples, and Achilles tendons were performed. Compared to the non-PM group, the white blood cell count and tumor necrosis factor-alpha expression in the PM group were significantly higher. The Achilles tendons in PM group showed significantly increased inflammatory outcomes. A TEM analysis showed reduced collagen fibrils in the PM group. A biomechanical analysis demonstrated that the load to failure value was lower in the PM group. An upregulation of the gene encoding cyclic AMP response element-binding protein (CREB) was detected in the PM group by an integrated analysis of DNA methylation and RNA sequencing data, as confirmed via a Western blot analysis showing significantly elevated levels of phosphorylated CREB. In summary, PM exposure caused a deleterious effect on tendon healing. The molecular data indicate that the action mechanism of PM may be associated with upregulated CREB signaling.     

Field Observations of Ipanema Beach Outfall

Field observations of the Ipanema Beach, Rio de Janeiro, Brazil, ocean sewage outfall were obtained by adding dye tracers to the effluent and simultaneously measuring oceanographic conditions. Four experiments were performed, two during unstratified conditions, and two during stratified conditions. When stratified, the plume was trapped below the thermocline with low dilution, around 35 to 1, when unstratified, the plume surfaced and the dilution increased to more than 100 to 1. The results were compared with predictions of some commonly used near field plume mathematical models: UM3, RSB, and CORMIX. With suitable assumptions, all the models reasonably predict near field dilution. RSB predicts near field results directly; for UM3 and CORMIX, it was assumed that the end of the near field occurs when the plume reaches its terminal rise height or impacts the free surface. Different assumptions about the shape of the density profiles in CORMIX resulted in widely differing predictions of dilution. While the gross properties of the plume can be reasonably predicted by plume models, there remain many aspects which cannot be, particularly the patchy nature of the wastefield that has been observed here and in other field tests.     

Assessment of the load-bearing capacity of a primary pipeline

High-alloyed Cr-Ni-based two-phase stainless steel (SS) cast alloys are commonly used in nuclear power plants. The mechanical equipment in these facilities can contribute to a reduction in its resistance to stable crack growth as a result of extended operating times and high temperatures. The toughness of these materials strongly depends on their delta (δ) ferrite content, which spinodally decomposes into two phases with different ratios of Cr and Ni at a relatively low (slightly above 300 °C) temperature. This temperature is similar to the operating temperature of the vital parts, for example, the coolant system. The formation of two phases with the same crystal structure but different lattice parameters causes internal elastic stresses that result in a hardness increase and an impact-toughness decrease. The result is an increased risk of crack formation in the stress-concentration zones such as the critical regions of different welded joints (e.g. “L, T, K and X” shapes). The values of the critical stress intensity factor change according to its position along the crack contour. Therefore, the aim of our study was to assess the influence of the materials’ changes on the crack extension and the decrease of the primary pipeline’s bearing capacity by taking account of the increased temperature and time of operation for the given loading conditions. The SINTAP (European Structural Integrity Assessment Procedure) was used for this assessment.     

Directly compressed mini matrix tablets containing ibuprofen: preparation and evaluation of sustained release

Directly compressed mini tablets were produced containing either hydroxypropylmethylcellulose (HPMC) or ethylcellulose (EC) as release controlling agent. The dynamics of water uptake and erosion degree of polymer were investigated. By changing the polymer concentration, the ibuprofen release was modified. In identical quantities, EC produced a greater sustaining release effect than HPMC. Different grades of viscosity of HPMC did not modify ibuprofen release. For EC formulations, the contribution of diffusion was predominant in the ibuprofen release process. For HPMC preparations, the drug release approached zero-order during a period of 8 h. For comparative purposes, tablets with 10 mm diameter were produced.     

Identification of Loci Governing Agronomic Traits and Mutation Hotspots via a GBS-Based Genome-Wide Association Study in a Soybean Mutant Diversity Pool

In this study, we performed a genotyping-by-sequencing analysis and a genome-wide association study of a soybean mutant diversity pool previously constructed by gamma irradiation. A GWAS was conducted to detect significant associations between 37,249 SNPs, 11 agronomic traits, and 6 phytochemical traits. In the merged data set, 66 SNPs on 13 chromosomes were highly associated (FDR p < 0.05) with the following 4 agronomic traits: days of flowering (33 SNPs), flower color (16 SNPs), node number (6 SNPs), and seed coat color (11 SNPs). These results are consistent with the findings of earlier studies on other genetic features (e.g., natural accessions and recombinant inbred lines). Therefore, our observations suggest that the genomic changes in the mutants generated by gamma irradiation occurred at the same loci as the mutations in the natural soybean population. These findings are indicative of the existence of mutation hotspots, or the acceleration of genome evolution in response to high doses of radiation. Moreover, this study demonstrated that the integration of GBS and GWAS to investigate a mutant population derived from gamma irradiation is suitable for dissecting the molecular basis of complex traits in soybeans.     

Molecular Tuning of IR-786 for Improved Brown Adipose Tissue Imaging

To overcome the limitations of brown adipose tissue (BAT) imaging with MRI and PET/CT, near-infrared (NIR) fluorescence imaging has been utilized in living animals because it is highly sensitive, noninvasive, nonradioactive, and cost-effective. To date, only a few NIR fluorescent dyes for detecting BAT have been reported based on the structure-inherent targeting strategy. Among them, IR-786, a commercial cyanine dye, was used firstly for quantitative NIR imaging of BAT perfusion in 2003. Owing to the high cytotoxicity, poor water solubility, and strong nonspecific background uptake of IR-786, the chemical structure of IR-786 should be redesigned to be more hydrophilic and less toxic so that it can show more BAT-specific accumulation. Here, we developed a BAT-specific NIR dye, BF800-AM, by incorporating the tyramine linker in the original structure of IR-786. After modifying the physicochemical properties of IR-786, in vivo results showed significant uptake of the newly designed BF800-AM in the BAT with improved signal-to-background ratio. Additional in vivo studies using mouse tumor models revealed that BF800-AM targeting to BAT is independent of tumor tissues, as distinct from IR-786 showing uptake in both tissues. Therefore, BF800-AM can be used for improved noninvasive visualization of BAT mass and activity in living animals.     

Contribution of Capillary Zone Electrophoresis Hyphenated with Drift Tube Ion Mobility Mass Spectrometry as a Complementary Tool to Microfluidic Reversed Phase Liquid Chromatography for Antigen Discovery

The discovery of new antigens specific to multiple myeloma that could be targeted by novel immunotherapeutic approaches is currently of great interest. To this end, it is important to increase the number of proteins identified in the sample by combining different separation strategies. A capillary zone electrophoresis (CZE) method, coupled with drift tube ion mobility (DTIMS) and quadrupole time-of-flight mass spectrometry (QTOF), was developed for antigen discovery using the human myeloma cell line LP-1. This method was first optimized to obtain a maximum number of identifications. Then, its performance in terms of uniqueness of identifications was compared to data acquired by a microfluidic reverse phase liquid chromatography (RPLC) method. The orthogonality of these two approaches and the physicochemical properties of the entities identified by CZE and RPLC were evaluated. In addition, the contribution of DTIMS to CZE was investigated in terms of orthogonality as well as the ability to provide unique information. In conclusion, we believe that the combination of CZE-DTIMS-QTOF and microfluidic RPLC provides unique information in the context of antigen discovery.