A mixed helix--beta-sheet model of the transmembrane region of the nicotinic acetylcholine receptor

We have modelled the transmembrane region of the 7 nicotinicacetylcholine receptor as a mixed -helical/ß-sheetstructure. The model was mainly based on the crystal structureof a pore-forming toxin, heat-labile enterotoxin. This is apentameric protein having a central pore or channel composedof five -helices, one from each of the 5 B subunits that formthis pentamer. The remainder of this structure is ß-sheet,loops and a short -helix, not included in the model. The modeluses this channel as a template to build the transmembrane region,from M1 to the middle of M3. The remainder of M3 and M4 werebuilt de novo as -helices. Great consideration was given tolabelling data available for the transmembrane region. In generalterms, the shape of the model agrees very well with that obtainedindependently by electron microscopic analysis and the secondarystructure predicted by the model is in accord with that estimatedindependently by Fourier transform infrared spectroscopy. TheM2 helical region of the model is only slightly kinked, contraryto what is inferred from electron microscopic analysis, buthas the same overall shape and form. On the membrane face ofthe model, the presence of deep pockets may provide the structuralbasis for the distinction between annular and non-annular lipidbinding sites. Also, the transmembrane region is clearly asymmetricin the direction perpendicular to the membrane, and this mayhave strong influence on the surrounding lipid composition ofeach leaflet of the cytoplasmic membrane.     

Rheological and morphological properties of high‐density polyethylene and poly(ethylene–octene) blends

The rheological and morphological properties of blends based on high‐density polyethylene (HDPE) and a commercial ethylene–octene copolymer (EOC) produced by metallocene technology were investigated. The rheological properties were evaluated in steady and dynamic shear experiments at 190°C in shear rates ranging from 90 s^?1 to 1500 s^?1 and frequency range between 10^?1 rad/s and 10² rad/s, respectively. These blends presented a high level of homogeneity in the molten state and rheological behavior was generally intermediate to those of the pure components. Scanning electron microscopy (SEM) showed that the blends exhibit dispersed morphologies with EOC domains distributed homogeneously and with particle size inferior to 2 μm. © 2002 Wiley Periodicals, Inc. J Appl Polym Sci 86: 2240–2246, 2002     

EDT Method for Multiple Labelled Objects Subject to Tied Distances

Machine Intelligence Research - The success of new scientific areas can be assessed by their potential for contributing to new theoretical approaches aligned with real-world applications. The...     

Mid‐infrared spectroscopy as a tool for real‐time monitoring of ethanol absorption in glycols

Fast, simple, accurate, and inexpensive methods for obtaining analyte concentration data are desirable in the industrial sector. In the present study, the use of Fourier transform mid‐infrared (FT‐MIR) spectroscopy, combined with partial least squares (PLS) regression, was investigated as a tool for real‐time monitoring of processes of ethanol absorption in glycols. Calibration was performed using simple synthetic samples containing ethanol, water, and monoethylene glycol (MEG) or diethylene glycol (DEG). The PLS models presented excellent performance, with correlation coefficients (R²) close to unity and root‐mean‐square errors of cross‐validation (RMSECV) and prediction (RMSEP) lower than 2% of the calibration data ranges for both analytes (ethanol and water) in both absorbents (MEG and DEG). The monitoring technique developed has potential to be applied in absorption processes and could also be used in other large‐scale unit operations, providing information in real time and enhancing process control.     

Socio-Cultural Connections and Ruptures: Social Roles of Older Adults in Chile

This research focused on determining the sociocultural factors that build the social perception of the social roles of senior citizens in Chile in the 2002–2012 period. For this purpose, public opinion was studied in newspapers El Mercurio and La Cuarta. Specialized opinion included the Senior Citizen Program of Pontificia Universidad Católica de Chile, the National Service for Senior Citizens, the Social Observatory for Aging and Old Age of Universidad de Chile, and the Society of Geriatrics and Gerontology of Chile. A comprehensive methodology was used, along with a bibliographical four-stage design. The following ten sociocultural factors were identified: Health and Quality of Life, Studies and Data, Social Images of Aging, Gerontological Concepts and Sociopolitical Participation, Gerontological Policies, Plans and Principles, Aging, Production and Gender, Institutionalization, Demographic Growth, Gerontological Training, and Exclusion and Old Age. This work suggests modifying the conceptual premise that emphasizes the inexistence of a social role for elderly people with a vision centered on the heterogeneity of social roles under permanent sociocultural construction.     

Bed morphology, flow structure, and sediment transport at the outlet of Lake Huron and in the upper St. Clair River

An integrated multibeam echo sounder and acoustic Doppler current profiler field survey was conducted in July 2008 to investigate the morphodynamics of the St. Clair River at the outlet of Lake Huron. The principal morphological features of the upper St. Clair River included flow-transverse bedforms that appear weakly mobile, erosive bedforms in cohesive muds, thin non-cohesive veneers of weakly mobile sediment that cover an underlying cohesive (till or glacio-lacustrine) surface, and vegetation that covers the bed. The flow was characterized by acceleration as the banks constrict from Lake Huron into the St. Clair River, an approximately 1500-m long region of flow separation downstream from the Blue Water Bridge, and secondary flow connected to: i) channel curvature; ii) forcing of the flow by local bed topography, and iii) flow wakes in the lee side of ship wrecks. Nearshore, sand-sized, sediment from Lake Huron was capable of being transported into, and principally along, the banks of the upper St. Clair River by the measured flow. A comparison of bathymetric surveys conducted in 2007 and 2008 identifies that the gravel bed does undergo slow downstream movement, but that this movement does not appear to be generated by the mean flow, and could possibly be caused by ship-propeller-induced turbulence. The study results suggest that the measured mean flow and dredging within the channel have not produced major scour of the upper St. Clair River and that the recent fall in the level of Lake Huron is unlikely to have been caused by these mechanisms.     

Topological Repairing of 3D Digital Images

We present here a new randomized algorithm for repairing the topology of objects represented by 3D binary digital images. By “repairing the topology”, we mean a systematic way of modifying a given binary image in order to produce a similar binary image which is guaranteed to be well-composed. A 3D binary digital image is said to be well-composed if, and only if, the square faces shared by background and foreground voxels form a 2D manifold. Well-composed images enjoy some special properties which can make such images very desirable in practical applications. For instance, well-known algorithms for extracting surfaces from and thinning binary images can be simplified and optimized for speed if the input image is assumed to be well-composed. Furthermore, some algorithms for computing surface curvature and extracting adaptive triangulated surfaces, directly from the binary data, can only be applied to well-composed images. Finally, we introduce an extension of the aforementioned algorithm to repairing 3D digital multivalued images. Such an algorithm finds application in repairing segmented images resulting from multi-object segmentations of other 3D digital multivalued images.

On the stochastic timed Pétri nets model and its application to the DQDB protocol

The goal of this paper is twofold : at first, to present the stochastic timed Pétri nets model by emphasizing its ability to express the main characteristics of real time distributed systems (parallelism, synchronization by message exchange, time attributes and in particular time constraints) and to allow both qualitative and quantitative analysis (concept of randomized states graph); second, to show a modeling methodology based on this model that allows a rigorous modeling of theDqdb protocol (Qa access, bwb mechanism role,Pa access influence). A new contribution to theQa mechanism has been done (1).     

Revisiting Zhang's 1D calibration algorithm

In recent years, the camera calibration using 1D patterns has been studied and improved by researchers all over the world. However, the progress in that area has been mainly in the sense of reducing the restrictions to the 1D pattern movement. On the other hand, the method's accuracy still demands improvements. In the present paper, the original technique proposed by Zhang is revisited and we demonstrate that the method's accuracy can be significantly improved, simply by analyzing and reformulating the problem. The numerical conditioning can be improved if a simple data normalization is performed. Furthermore, a non-linear solution based on the Partitioned Levenberg-Marquardt algorithm is proposed. That solution takes advantage of the problem's particular structure to reduce the computational complexity of the original method and to improve the accuracy. Tests using both synthetic and real images demonstrate that the calibration method using 1D patterns can be applied in practice, with accuracy comparable to other already traditional methods.