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81.
82.
Valentina Masola Mario Bonomini Silvio Borrelli Lorenzo Di Liberato Luigi Vecchi Maurizio Onisto Giovanni Gambaro Roberto Palumbo Arduino Arduini 《International journal of molecular sciences》2022,23(9)
Peritoneal dialysis (PD) is an efficient renal replacement therapy for patients with end-stage renal disease. Even if it ensures an outcome equivalent to hemodialysis and a better quality of life, in the long-term, PD is associated with the development of peritoneal fibrosis and the consequents patient morbidity and PD technique failure. This unfavorable effect is mostly due to the bio-incompatibility of PD solution (mainly based on high glucose concentration). In the present review, we described the mechanisms and the signaling pathway that governs peritoneal fibrosis, epithelial to mesenchymal transition of mesothelial cells, and angiogenesis. Lastly, we summarize the present and future strategies for developing more biocompatible PD solutions. 相似文献
83.
Enrico Mario Alessandro Fassi Mariangela Garofalo Jacopo Sgrignani Michele Dei Cas Matteo Mori Gabriella Roda Andrea Cavalli Giovanni Grazioso 《International journal of molecular sciences》2022,23(9)
(1) Background: Disfunctions in autophagy machinery have been identified in various conditions, including neurodegenerative diseases, cancer, and inflammation. Among mammalian autophagy proteins, the Atg8 family member GABARAP has been shown to be greatly involved in the autophagy process of prostate cancer cells, supporting the idea that GABARAP inhibitors could be valuable tools to fight the progression of tumors. (2) Methods: In this paper, starting from the X-ray crystal structure of GABARAP in a complex with an AnkirinB-LIR domain, we identify two new peptides by applying in silico drug design techniques. The two ligands are synthesized, biophysically assayed, and biologically evaluated to ascertain their potential anticancer profile. (3) Results: Two cyclic peptides (WC8 and WC10) displayed promising biological activity, high conformational stability (due to the presence of disulfide bridges), and Kd values in the low micromolar range. The anticancer assays, performed on PC-3 cells, proved that both peptides exhibit antiproliferative effects comparable to those of peptide K1, a known GABARAP inhibitor. (4) Conclusions: WC8 and WC10 can be considered new GABARAP inhibitors to be employed as pharmacological tools or even templates for the rational design of new small molecules. 相似文献
84.
Jonas Feldheim Almuth F. Kessler Julia J. Feldheim Ellina Schulz David Wend Lazaros Lazaridis Christoph Kleinschnitz Martin Glas Ralf-Ingo Ernestus Sebastian Brandner Camelia M. Monoranu Mario Lhr Carsten Hagemann 《International journal of molecular sciences》2022,23(9)
Glioblastoma leads to a fatal course within two years in more than two thirds of patients. An essential cornerstone of therapy is chemotherapy with temozolomide (TMZ). The effect of TMZ is counteracted by the cellular repair enzyme O6-methylguanine-DNA methyltransferase (MGMT). The MGMT promoter methylation, the main regulator of MGMT expression, can change from primary tumor to recurrence, and TMZ may play a significant role in this process. To identify the potential mechanisms involved, three primary stem-like cell lines (one astrocytoma with the mutation of the isocitrate dehydrogenase (IDH), CNS WHO grade 4 (HGA)), and two glioblastoma (IDH-wildtype, CNS WHO grade 4) were treated with TMZ. The MGMT promoter methylation, migration, proliferation, and TMZ-response of the tumor cells were examined at different time points. The strong effects of TMZ treatment on the MGMT methylated cells were observed. Furthermore, TMZ led to a loss of the MGMT promoter hypermethylation and induced migratory rather than proliferative behavior. Cells with the unmethylated MGMT promoter showed more aggressive behavior after treatment, while HGA cells reacted heterogenously. Our study provides further evidence to consider the potential adverse effects of TMZ chemotherapy and a rationale for investigating potential relationships between TMZ treatment and change in the MGMT promoter methylation during relapse. 相似文献
85.
José Luis Ochoa Rafael Valencia-García Alonso Perez-Soltero Mario Barceló-Valenzuela 《Expert systems with applications》2013,40(6):2058-2068
Currently, most of the information available in the Web is adapted primarily for human consumption, but there is so much information that can no longer be processed by a person in a reasonable time, either in digital or physical formats. To solve this problem, the idea of the Semantic Web arose. The Semantic Web deals with adding machine-readable information to Web pages. Ontologies represent a very important element of this web, as they provide a valid and robust structure to represent knowledge based on concepts, relations, axioms, etc. The need for overcoming the bottleneck provoked by the manual construction of ontologies has generated several studies and research on obtaining semiautomatic methods to learn ontologies. In this sense, this paper proposes a new ontology learning methodology based on semantic role labeling from digital Spanish documents. The method makes it possible to represent multiple semantic relations specially taxonomic and partonomic ones in the standardized OWL 2.0. A set of experiments has been performed with the approach implemented in educational domain that show promising results. 相似文献
86.
Rodrigo R. Oliveira Felipe C. Noguez Cristiano A. Costa Jorge L. Barbosa Mario P. Prado 《Expert systems with applications》2013,40(6):2023-2031
Logistics represent the biggest cost for transportation companies. Companies are investing in monitoring and tracking systems aiming at improving services, reducing costs and ensuring the safety in cargos transports. This article presents an intelligent model to obtain the position of vehicles, using off-the-shelf mobile devices named SWTRACK. The proposal allows distributors companies to track loads and to have real-time information about their whereabouts during a travel. SWTRACK presents an automatic travel management to initialize and finish travels without user interaction. Furthermore, it provides a mechanism to monitor detours in planned routes and to send alarms notification through mobile devices. To build that mechanism, we studied the Geofence concept and existing techniques to prepare two solutions based on continuous monitoring. Those solutions were compared and discussed. We also conducted a model evaluation using off-the-shelf mobile devices. Moreover, we provide an impact analysis regarding GPS precision and battery power consumption. In the end, we show that the proposed model generates a reliable system for tracking vehicles. 相似文献
87.
The aim of this paper is to introduce a decision support system that ranks patents based on multiple expert evaluations. The presented approach starts with the creation of three value scenarios for each considered patent by each expert. These are used for the construction of individual fuzzy pay-off distribution functions for the patent value; a consensual fuzzy pay-off distribution is then determined starting from the individual distributions. Possibilistic moments are calculated from the consensus pay-off distribution for each patent and used in ranking them with TOPSIS. It is further showed how the analytic hierarchy process (AHP) can be used to include additional decision variables into the patent selection, thus allowing for a two-tier decision making process. The system is illustrated with a numerical example and the usability of the system and the combination of methods it includes for patent portfolio selection in the real world context is discussed. 相似文献
88.
Joshua L. Payne Mario Giacobini Jason H. Moore 《Soft Computing - A Fusion of Foundations, Methodologies and Applications》2013,17(7):1109-1120
The population structure of an evolutionary algorithm influences the dissemination and mixing of advantageous alleles, and therefore affects search performance. Much recent attention has focused on the analysis of complex population structures, characterized by heterogeneous connectivity distributions, non-trivial clustering properties, and degree–degree correlations. Here, we synthesize the results of these recent studies, discuss their limitations, and highlight several open questions regarding (1) unsolved theoretical issues and (2) the practical utility of complex population structures for evolutionary search. In addition, we will discuss an alternative complex population structure that is known to significantly influence dynamical processes, but has yet to be explored for evolutionary optimization. We then shift our attention toward dynamic population structures, which have received markedly less attention than their static counterparts. We will discuss the strengths and limitations of extant techniques and present open theoretical and experimental questions and directions for future research. In particular, we will focus on the prospects of “active linking,” wherein edges are dynamically rewired according to the genotypic or phenotypic properties of individuals, or according to the success of prior inter-individual interactions. 相似文献
89.
Xuesong Liu Burcu Akinci Mario Bergés James H. Garrett 《Advanced Engineering Informatics》2013,27(4):496-505
Heating, Ventilation and Air-Conditioning (HVAC) systems account for more than 15% of the total energy consumption in the US. In order to improve the energy efficiency of HVAC systems, researchers have developed hundreds of algorithms to automatically analyze their performance. However, the complex information, such as configurations of HVAC systems, layouts and materials of building elements and dynamic data from the control systems, required by these algorithms inhibits the process of deploying them in real-world facilities. To address this challenge, we envision a framework that automatically integrates the required information items and provides them to the performance analysis algorithms for HVAC systems. This paper presents an approach to identify and document the information requirements from the publications that describe these algorithms. We extend the Information Delivery Manual (IDM) approach so that the identified information requirements can be mapped to multiple information sources that use various formats and schemas. This paper presents the extensions to the IDM approach and the results of using it to identify information requirements for performance analysis algorithms of HVAC systems. 相似文献
90.
Maarten Houbraken Sofie Demeyer Dimitri Staessens Pieter Audenaert Didier Colle Mario Pickavet 《Natural computing》2013,12(2):277-289
Physarum polycephalum, a true slime mould, is a primitive, unicellular organism that creates networks to transport nutrients while foraging. The design of these natural networks proved to be advanced, e.g. the slime mould was able to find the shortest path through a maze. The underlying principles of this design have been mathematically modelled in literature. As in real life the slime mould can design fault tolerant networks, its principles can be applied to the design of man-made networks. In this paper, an existing model and algorithm are adapted and extended with stimulation and migration mechanisms which encourage formation of alternative paths, optimize edge positioning and allow for automated design. The extended model can then be used to better design fault tolerant networks. The extended algorithm is applied to several national and international network configurations. Results show that the extensions allow the model to capture the fault tolerance requirements more accurately. The resulting extended algorithm overcomes weaknesses in geometric graph design and can be used to design fault tolerant networks such as telecommunication networks with varying fault tolerance requirements. 相似文献