Nucleotide sequences and characterization of genes encoding naphthalene upper pathway of pseudomonas aeruginosa PaK1 and Pseudomonas putida OUS82

A 12,808-nucleotide containing DNA fragment cloned from naphthalene-utilizing (Nah+) Pseudomonas aeruginosa PaK1 was analyzed and compared with the genes (pah(OUS)) of a 14,462-nucleotide DNA fragment from Pseudomonas putida OUS82. The DNA sequence analyses demonstrated that the naphthalene upper-pathway genes and their deduced enzymes were very similar between the two bacteria: nucleotide similarities, 83-93%; amino acid similarities, 79-95%. These genes were also similar to those of the nah operon of plasmid NAH7; in particular, the OUS82 genes were similar to the nah genes, whereas the PaK1 genes were almost identical to the dox genes of Pseudomonas sp. C18. A region homologous with the 84-bp repeated sequence that Eaton (J. Bacteriol., 176, 7757-7762, 1994) has found at a site upstream of he nah operon was found only in a region downstream of the pah(PaK) gene cluster in PaK1 and on both sides of the pah(OUS) gene cluster in OUS82. A PaK1 gene, corresponding to an unknown gene (nahQ) in the nah operon, is located between the 1,2-dihydroxynaphthalene dioxygenase gene and the trans-o-hydroxybenzylindenepyruvate (tHBP A) hydratase-aldolase gene (nahE), and was suggested to be involved in the conversion of naphthalene to salicylate. Just downstream of the pah(PaK) gene cluster, a portion of a region was identical to one-third of the transposase gene (tnpA) in a phenol-catabolic plasmid pEST1226.     

Biodegradation of phenol in the presence of heavy metals

A microbial growth model was presented for estimating the dynamic behavior of cell growth and substrate consumption in the biodegradation of phenol containing a heavy metal, such as zinc or copper ions. The application of the model for experiments in a batch culture and a continuous culture was examined. The values calculated according to the model corresponded satisfactorily with experimental data, such as the optical density of cells and the concentration of phenol. Using the model, the stability of steady states in a continuous culture was analytically evaluated based on the eigenvalues. The steady states were separated into three categories: (i) a stable steady state where phenol was consumed, (ii) an unstable steady state where phenol was consumed, and (iii) a washout state where phenol was not consumed. The number, kind, and stability of steady states varied significantly with operational conditions such as dilution rate, feed concentration of phenol, and feed concentration of heavy metal ions. The operational conditions required to obtain the stable steady state where phenol was consumed are shown graphically. © 2000 Society of Chemical Industry     

Suppression of Bone Necrosis around Tooth Extraction Socket in a MRONJ-like Mouse Model by E-rhBMP-2 Containing Artificial Bone Graft Administration

Medication-related osteonecrosis of the jaw (MRONJ) is related to impaired bone healing conditions in the maxillomandibular bone region as a complication of bisphosphonate intake. Although there are several hypotheses for the onset of MRONJ symptoms, one of the possible causes is the inhibition of bone turnover and blood supply leading to bone necrosis. The optimal treatment strategy for MRONJ has not been established either. BMP-2, a member of the TGF-β superfamily, is well known for regulating bone remodeling and homeostasis prenatally and postnatally. Therefore, the objectives of this study were to evaluate whether cyclophosphamide/zoledronate (CY/ZA) induces necrosis of the bone surrounding the tooth extraction socket, and to examine the therapeutic potential of BMP-2 in combination with the hard osteoinductive biomaterial, β-tricalcium phosphate (β-TCP), in the prevention and treatment of alveolar bone loss around the tooth extraction socket in MRONJ-like mice models. First, CY/ZA was intraperitoneally administered for three weeks, and alveolar bone necrosis was evaluated before and after tooth extraction. Next, the effect of BMP-2/β-TCP was investigated in both MRONJ-like prevention and treatment models. In the prevention model, CY/ZA was continuously administered for four weeks after BMP-2/β-TCP transplantation. In the treatment model, CY/ZA administration was suspended after transplantation of BMP-2/β-TCP. The results showed that CY/ZA induced a significant decrease in the number of empty lacunae, a sign of bone necrosis, in the alveolar bone around the tooth extraction socket after tooth extraction. Histological analysis showed a significant decrease in the necrotic alveolar bone around tooth extraction sockets in the BMP-2/β-TCP transplantation group compared to the non-transplanted control group in both MRONJ-like prevention and treatment models. However, bone mineral density, determined by micro-CT analysis, was significantly higher in the BMP-2/β-TCP transplanted group than in the control group in the prevention model only. These results clarified that alveolar bone necrosis around tooth extraction sockets can be induced after surgical intervention under CY/ZA administration. In addition, transplantation of BMP-2/β-TCP reduced the necrotic alveolar bone around the tooth extraction socket. Therefore, a combination of BMP-2/β-TCP could be an alternative approach for both prevention and treatment of MRONJ-like symptoms.     

Imaging of a single atomic column in silicon grain boundary

Atomic resolution high voltage electron microscopy was applied in investigations of the atomic structure of [112] sigma3 CSL grain boundary of silicon. Images of the grain boundary, viewed in the < 110 > direction, showed two types of dark spots. One type was rod shaped, which represented an atomic pair aligned in the < 111 > direction. The other was a small round spot, which represented a single atomic column in the grain boundary. The atomic structure of [112] sigma3 CSL grain boundary was directly shown from the atomic-structure image.     

Effect of GaAs surface pretreatment on electrical properties of MBE-ZnSe/GaAs substrate interfaces

Interface properties of MBE-grown ZnSe/GaAs substrate systems formed on variously pretreated GaAs surfaces, which include standard chemically etched (5H₂SO₄:1H₂O₂: 1H₂O), (NH₄)₂S_x-, NH₄I-, and HF-pretreated surfaces, are investigated by capacitance-voltage (C-V) and deep level transient spectroscopy (DLTS) measurements. A HF-pretreated and annealed ZnSe/p-GaAs sample showed marked reduction of interface state density, N_ss, with N_ss,_min below 4 x 10¹¹cm^-2 eV^-1 near E_c- E_FS= 1.0 eV. The value is about one order of magnitude smaller than that of the standard chemically etched interface, and comparable to (NH₄)₂S_x- pretreated interface. Nevertheless, C-V characteristics of ZnSe/nGaAs samples, which were measured for the first time, indicate that interface Fermi level, E_FS, is not completely unpinned due to the interface states located above the midgap. A consistent result was obtained by DLTS method in determining E_FS position. The influence of N_ss distribution on vertical current conduction is also analyzed. It is found that U-shaped interface states with N_ss(E) > 1 x 10¹³ cm^-2 eV^-1 above the midgap may cause an excess voltage drop larger than a few volts at the interface.     

Electrochemical injection of organic corrosion inhibitors into carbonated cementitious materials: Part 1. Effects on pore solution chemistry

This series of investigations was intended to clarify phenomena associated with electrochemical injection of the organic base corrosion inhibitors, ethanolamine and guanidine, into carbonated concrete. In Part 1, experiments were conducted with laminated specimens of carbonated cement paste, that were specially designed to facilitate analysis with adequate spatial resolution to assess changes in their pore solution phase chemistry after they had been subjected to constant current electrolysis between embedded cathodes and external anodes. The anolyte solutions provided sources of ethanolamine or guanidine in contact with the exterior specimen surfaces. Effects of variations in the applied current density and duration of electrolysis on the concentration profiles of the two inhibitors and the other main constituents of the pore solution phase were determined. The results have been used to underpin the development of a mathematical model, which is described in Part 2.     

Preparation and applications of novel fluoroalkyl end-capped acrylic acid oligomers/silica nanocomposites-encapsulated fullerenes

Fluoroalkyl end-capped acrylic acid oligomers/fullerenes nanocomposites reacted smoothly with tetraethoxysilane (TEOS) and silica nanoparticles under alkaline conditions to give fluoroalkyl end-capped oligomers/silica composites-encapsulated fullerenes. Interestingly, these isolated fluorinated composites were found to afford nanometer size-controlled colloidal particles with a good dispersibility in a variety of organic solvents including water. More interestingly, these fluorinated silica nanocomposites-encapsulated fullerenes were applied to a new type of surface modification agent, and these nanocomposites were able to disperse well above the poly(methyl methacrylate) films to exhibit not only surface active property imparted by fluorine but also a unique characteristic related to fullerenes in the nanocomposites on the surface, effectively.     

Investigation of Dry‐Heated Hard and Soft Wheat Flour

The Amylograph profile of dry‐heated (120°C, 120 min) wheat flour showed a drastic change, i.e. an earlier onset time and higher peak viscosity than that of a control. However, no difference in the size of the starch granules was observed between dry‐heated and normal starch at every temperature. Wheat flour was fractionated with acetic acid, and the separated prime starch (PS) and tailings (T) fractions were dry‐heated at 120°C for 30, 60, 90, and 120 min, respectively. There was almost no difference in the RVA and DSC profiles between PS and dry‐heated PS, and T and dry‐heated T fractions, i.e., dry heating of wheat flour did not change the structures of starch that would be related to onset time and peak viscosity in the Amylograph profile. We thus excluded the water solubles (WS) fractions from control and dry‐heated wheat flour, but the effect of dry heating on the Amylograph profile was not lost. Next, the gluten (G) fraction was excluded following WS fraction from these wheat flours, and Amylograph tests were performed. The Amylograph profiles in both wheat flours were almost coincidental, which showed that the G fraction in dry‐heated wheat flour caused the earlier onset time and higher peak viscosity.     

A study of silver species on silver-exchanged ETS-10 and mordenite by XRD, SEM and solid-state 109Ag, 29Si and 27AI NMR spectroscopy

Silver zeolites, especially Ag-ETS-10 and Ag-mordenite, actively bind xenon and iodine, two prime contaminants common to nuclear accidents. The evolution of silver species on silver exchanged ETS-10 (Ag/ETS-10) and mordenite (Ag/Mor) has been investigated by exposing the materials to a series of activation conditions in Ar, air and H2. The samples were characterized by XRD, SEM and solid-state 109Ag, 29Si and 27AI MAS NMR. The silver reduction and structural evolution have been illustrated by those techniques. The effectiveness of one sample of each type of sieve was tested for its ability to trap mercury from a gas stream. However, the results from this study demonstrate that the adsorption characteristics of silver-loaded sieves cannot necessarily be predicted using a full complement of structural characterization techniques, which highlights the importance of understanding the formation and nature of silver species on molecular sieves.