A cluster-DEE-based strategy to empower protein design

The Medical and Pharmaceutical industries have shown high interest in the precise engineering of protein hormones and enzymes that perform existing functions under a wide range of conditions. Proteins are responsible for the execution of different functions in the cell: catalysis in chemical reactions, transport and storage, regulation and recognition control. Computational Protein Design (CPD) investigates the relationship between 3-D structures of proteins and amino acid sequences and looks for all sequences that will fold into such 3-D structure. Many computational methods and algorithms have been proposed over the last years, but the problem still remains a challenge for Mathematicians, Computer Scientists, Bioinformaticians and Structural Biologists. In this article we present a new method for the protein design problem. Clustering techniques and a Dead-End-Elimination algorithm are combined with a SAT problem representation of the CPD problem in order to design the amino acid sequences. The obtained results illustrate the accuracy of the proposed method, suggesting that integrated Artificial Intelligence techniques are useful tools to solve such an intricate problem.     

Measurement of periodic micro flows using micro-particle image velocimetry with phase sampling

A phase-sampling method has been developed to measure periodic flows at a high temporal resolution using conventional micro-particle image velocimetry (PIV). In this technique, the sampling is set such that each velocimetry dataset represents a unique point in phase of a periodic flow. The flow characteristics over a single cycle are reconstructed from measurements over a number of cycles, thus allowing measurement at a higher temporal resolution than the PIV system. The flow measurements were performed for AC electroosmotic flows and verified with results from the phase-locking technique. The temporal resolution is limited by the shortest camera exposure time and the time separation between laser pulses. The theoretical sampling resolution can be as low as 20 μs for 100 Hz periodic flows. A resolution of 200 μs was obtained in the experiment using 40 velocimetry datasets.     

Critical aspects of sinter-hardening of prealloyed Cr–Mo steel

In recent years, growing demand for greater mechanical properties of PM steel components with competitive fabrication cost has led to significant innovations in different fields of powder metallurgy. Recent research has been focused on reaching higher performance with lower cost. To this end, the possibility of combining the conventional sintering and post-sintering processes for a particular powder composition has been introduced. Sinter-hardening is a result of the research conducted along this line. Elimination of any secondary operation such as quench-hardening by incorporating it in the sintering process (i.e. sinter-hardening) is of great interest, as it will lead to lower processing costs and equal, if not higher mechanical performance. However, to ensure the desired mechanical properties of the final component and robustness of the performance, critical aspects of the sinter-hardening process should be rigorously studied.Hence with specific attention to a Cr–Mo steel powder (FL-5305), this study deals with the influence of density on cooling rate, the effect of different sintering temperatures (e.g. 1120 °C and 1250 °C) on austenite grain size and consequently, hardenability. The microstructure development in sinter-hardened FL-5305 material has been analyzed and predicted by means of the available literature for solid steel and also using the commercial software (JMatPro 5.0) for materials assessment based on thermodynamic and kinetics modeling. Finally, inaccurate carbon control and its adverse impact on excessive formation of cementite have been addressed.     

Two-dimensional linear-combination model fitting of magnetic resonance spectra to define the macromolecule baseline using FiTAID,a Fitting Tool for Arrays of Interrelated Datasets

Object  

To propose the determination of the macromolecular baseline (MMBL) in clinical 1H MR spectra based on T₁ and T₂ differentiation using 2D fitting in FiTAID, a general Fitting Tool for Arrays of Interrelated Datasets.     

B-spline explicit active surfaces: an efficient framework for real-time 3-D region-based segmentation

A new formulation of active contours based on explicit functions has been recently suggested. This novel framework allows real-time 3-D segmentation since it reduces the dimensionality of the segmentation problem. In this paper, we propose a B-spline formulation of this approach, which further improves the computational efficiency of the algorithm. We also show that this framework allows evolving the active contour using local region-based terms, thereby overcoming the limitations of the original method while preserving computational speed. The feasibility of real-time 3-D segmentation is demonstrated using simulated and medical data such as liver computer tomography and cardiac ultrasound images.     

Facteur de couplage phase-amplitude des diodes lasers avec absorbant saturable

The phase-amplitude coupling factor (α-factor) is one of the fundamental parameters of semiconductor lasers. We show that this factor can be evaluated by time-resolved spectroscopic measurements in pulsed regime. Experiments are carried out with injectionseeded single-mode GaAs lasers whose active stripe includes regions of saturable absorption made by ion implantation. We show that the measured pulse downchirp is proportional to pulse energy. The downchirp amplitude is found to approach four laser cavity intermode spacings at the highest energies. Correspondingly, the ±-values can be five times higher than those reported to date in litterature. High a-values are confirmed in pulse compression experiments. Several mechanisms are proposed to interprete these new results.     

Chronic measurement of the stimulation selectivity of the flat interface nerve electrode

The flat interface nerve electrode (FINE) is an attempt to improve the stimulation selectivity of extraneural electrodes. By reshaping peripheral nerves into elliptical cylinders, central fibers are moved closer to the nerve-electrode interface, and additional surface area is created for contact placement. The goals of this study were to test the hypothesis that greater nerve reshaping leads to improved selectivity and to examine the chronic recruitment properties of the FINE. Three FINEs were developed to reshape peripheral nerves to different degrees. Four electrodes of each type were implanted on the sciatic nerves of 12 cats and tested for selectivity over at least three months. There was physiologic evidence of nerve injury in two cats with the tightest cuffs, but the other animals behaved normally. All cuff types were capable of selectively activating branches of the sciatic nerve, as well as groups of fibers within branches. The electrodes that moderately reshaped the nerves demonstrated the most selectivity. Both the selectivity measurements and the recruitment curve characteristics were stable throughout the implant period. From an electrophysiological standpoint, the FINE is a viable alternative for neuroprosthetic devices. A histological analysis of the nerves is under way to evaluate the safety of the FINE.     

Detection of Carbon Dioxide in Air Using Difference-Frequency Generation Based Infrared Spectrometer

Spectroscopic detection of carbon dioxide (CO₂) in ambient air was performed using a continuous-wave mid-infrared spectrometer based on difference-frequency generation in an AgGaS₂ crystal. Significant improvement in nonlinear optical frequency conversion efficiency was achieved by Gaussian beam optical design consideration. CO₂ concentration was determined from direct-absorption spectral measurement.     

Analysis of aperture-coupled microstrip antenna using thesegmentation method

The authors present an original analysis of an aperture-coupled microstrip antenna. The theory is based on the segmentation method, which considers the patch as a multiport network whose impedance matrix is deduced from a hybrid matrix, and the use of analytical expressions of the cavity admittance at the slot centre. The theory is presented for the first time, and the theoretical results are in good agreement with previous published measurements