Heterogeneous bulk polymerization of styrene in the presence of polybutadiene: Calculation of the macromolecular structure

A mathematical model is presented that simulates the polymerization of styrene in the presence of polybutadiene (PB) for producing high‐impact polystyrene (HIPS) via the heterogeneous bulk process. The model follows the polymerization in two phases; and calculates in each phase the main reaction variables and the molecular structure of the three polymeric components: free polystyrene (PS), unreacted PB, and graft copolymer. Two polymerizations (at 90 and 120°C) were carried out and simulated. The model was validated with measurements of the monomer conversion, the grafting efficiencies, and the average molecular weights. © 2006 Wiley Periodicals, Inc. J Appl Polym Sci 99: 3023–3039, 2006     

Facile biocatalytic access to 9-fluorenylmethyl polyglycosides: evaluation of antiviral activity on immunocompetent cells

The biological activities of a series of mono- and oligosaccharides (beta-xylosides and alpha-glucosides) of 9-fluorenylmethanol were investigated together with mono-beta-galactoside and beta-glucoside of this aglycone, produced by biocatalytic routes. By using marine glycoside hydrolases and inexpensive donors such as maltose or xylan, access to mono-alpha-glucoside or mono-beta-xyloside of 9-fluorenylmethanol was obtained. Additionally, interesting polyglycoside derivatives were isolated. Biological testing indicated that in vitro treatment with these carbohydrate derivatives may influence the balance of cytokines in the environment of human peripheral blood mononuclear cells (PBMC), restricting the harmful effect of herpes simplex type 2 replication. In fact, these carbohydrate derivatives tested in WISH cells did not show any significant antiviral activity.     

Scheduling algorithms‐by‐blocks on small clusters

The arrival of multicore architectures has generated an interest in reformulating dense matrix computations as algorithms‐by‐blocks, where submatrices are units of data and computations with those blocks are units of computation. Rather than directly executing such an algorithm, a directed acyclic graph is generated at runtime that is then scheduled by a runtime system such as SuperMatrix. The benefit is a clear separation of concerns between the library and the heuristics for scheduling. In this paper, we show that this approach can be taken one step further using the same methodology and an ad hoc runtime to map algorithms‐by‐blocks to small clusters. With no change to the library code, and the application that uses it, the computational power of such small clusters can be utilized. An impressive performance on a number of small clusters is reported. As a proof of the flexibility of the solution, we report performance results on accelerated clusters based on graphics processors. We believe this to be a possible step towards programming many‐core architectures, as demonstrated by a port of the solution to Intel's Single‐chip Cloud Computer (Intel, Santa Clara, CA, USA). Copyright © 2012 John Wiley & Sons, Ltd.     

Post-quake urban road network functionality assessment for seismic emergency management in historical centres

In this paper, a procedure for the evaluation of the interaction between existing buildings and urban roadway networks after a seismic event is proposed. This question is relevant in historical urban centres, where urbanisation typology has evidenced, in the past, lack of road networks’ residual connectivity in post-earthquake conditions. The present study proposes a method for the evaluation of the residual functionality in urban context, moving from the execution of building surveys, the application of probabilistic concepts and fuzzy logic with the aim to define probable urban road network damage scenarios. The methodology is applied to the Municipality of Conegliano (northeastern Italy) evaluating the potential seismic damage scenario to the historical urban centre and highlighting criticisms in the post-earthquake rescue operations.     

Mimicry between the hepatitis B virus DNA polymerase and the antigenic targets of nuclear and smooth muscle antibodies in chronic hepatitis B virus infection

Autoantibodies to nuclear and smooth muscle are common in hepatitis B virus (HBV) infection. To understand their origin, we scanned protein databases and found that HBV-DNA polymerase (HBV-pol) shares 7-9 amino acid sequences with nuclear (MHC II trans-activator, nuclear pore core protein, nuclear mitotic apparatus, and polymyositis sclerosis Ag) and smooth muscle proteins (caldesmon and myosin). Twenty-mer peptides with relevant homologues and an irrelevant control peptide were constructed and ELISAs were established. Sixty-five children with chronic HBV infection, 104 patients with other chronic liver diseases (CLD), 36 patients with extrahepatic autoimmune diseases, and 24 healthy controls were investigated. Double reactivity to HBV-pol peptides and corresponding self homologues was observed in 40% of HBV-positive patients as compared with four (4%) with other chronic liver diseases, two (6%) with extrahepatic autoimmune diseases, and in none of the healthy controls (p < 0.001 for all). Double reactivity to myosin or caldesmon peptides and their HBV-pol homologues was associated with anti-smooth muscle Ab positivity by immunofluorescence (p < 0.05 for both). HBV-positive sera double reactive for myosin or caldesmon and their homologous HBV-pol peptides also reacted with the native proteins on immunoblot. Fifty to ninety percent Ab inhibition to individual HBV-pol and HBV-pol99-118 peptides was noted by preincubation with individual HBV-pol/self homologue peptide and native proteins, respectively, but not with control peptide. Our results show that cross-reactive immunity targeting homologous sequences of viral and self proteins may partly account for autoantibody production in HBV infection.     

Influence of Polydatin on the Tumor Microenvironment In Vitro: Studies with a Colon Cancer Cell Model

The tumor microenvironment of colon carcinoma, the site at which tumor cells and the host immune system interact, is influenced by signals from tumor cells, immunocompetent cells, and bacterial components, including LPS. A large amount of LPS is available in the colon, and this could promote inflammation and metastasis by enhancing tumor cell adhesion to the endothelium. Polydatin (PD), the 3-β-D-glucoside of trans-resveratrol, is a polyphenol with anti-cancer, anti-inflammatory, and immunoregulatory effects. This study was designed to explore whether PD is able to produce antiproliferative effects on three colon cancer lines, to reduce the expression of adhesion molecules that are upregulated by LPS on endothelial cells, and to decrease the proinflammatory cytokines released in culture supernatants. Actually, we investigated the effects of PD on tumor growth in a coculture model with human mononuclear cells (MNCs) that mimics, at least in part, an in vitro tumor microenvironment. The results showed that PD alone or in combination with MNC exerts antiproliferative and proapoptotic effects on cancer cells, inhibits the production of the immunosuppressive cytokine IL-10 and of the proinflammatory cytokines upregulated by LPS, and reduces E-selectin and VCAM-1 on endothelial cells. These data provide preclinical support to the hypothesis that PD could be of potential benefit as a therapeutic adjuvant in colon cancer treatment and prevention.     

Improving an autotuning engine for 3D Fast Wavelet Transform on manycore systems

This paper presents an enhanced auto-optimization method to run the 3D-Fast Wavelet Transform on different computing units in a system (GPU, MIC, CPU). The proposed method automatically selects a set of parameter values (block size, number of streams and number of threads) in order to reduce the total execution time, obtaining performances close to the optimal and decreasing the number of evaluations needed.     

Dynamic properties of ankyrin in T lymphocytes: colocalization with spectrin and protein kinase C beta

Ankyrin is a well characterized membrane skeletal protein which has been implicated in the anchorage of specific integral membrane proteins to the spectrin-based membrane skeleton in a number of systems. In this study, the organization of ankyrin was examined in lymphocytes in relation to T cell function. Light and electron microscope immunolocalization studies revealed extensive heterogeneity in the subcellular distribution of ankyrin in murine tissue-derived lymphocytes. While ankyrin can be localized at the lymphocyte plasma membrane, it can also be accumulated at some distance from the cell periphery, in small patches or in a single discrete, nonmembrane-bound structure. Double immunofluorescence studies demonstrated that ankyrin colocalizes with spectrin and with the signal transducing molecule protein kinase C beta (PKC beta) in tissue-derived lymphocytes, suggesting a functional association between these molecules in the lymphocyte cytoplasm. In addition, T lymphocyte activation-related signals and phorbol ester treatment, both of which lead to PKC activation, cause a rapid translocation of ankyrin, together with spectrin and PKC beta, to a single Triton X-100-insoluble aggregate in the cytoplasm. This finding suggests a mechanism for the reported appearance of PKC in the particulate fraction of cells after activation: activated lymphocyte PKC beta may interact with insoluble cytoskeletal elements like ankyrin and spectrin. Further evidence for a link between the subcellular organization of these proteins and PKC activity is provided by the observation that inhibitors of PKC activity cause their concomitant redistribution to the cell periphery. The dynamic nature of lymphocyte ankyrin and its ability to accumulate at sites distant from the plasma membrane are properties which may be unique to the lymphocyte form of the molecule. Its colocalization with PKC beta in the lymphocyte cytoplasm, together with its redistribution in response to physiological signals, suggests that structural protein(s) may play a role in signal transduction pathways in this cell type. Our data support the conclusion that ankyrin is not solely involved in anchorage of proteins at the plasma membrane in lymphoid cells.     

Fixation Devices for Long Bone Fracture Reduction: An Overview and New Suggestions

External fixation devices for long bone fracture reduction are extensively used. Most of them are implemented by a trial and error process which alternates radiographs and fixation device adjustments in order to achieve a final correct positioning of the two bone segments. Fixation devices with less than six degrees of freedom are frequently used which can provide only an approximated segment positioning. This paper presents two new fixation device architectures having six degrees of freedom. They can be automatically actuated during the fracture reduction process under the surgeon's control. They perform a straight, not iterative, final correct positioning based only on a few radiographs. Finally, some suggestions on the actual workspace determination of the fixation devices have been reported together with some design considerations.