An empirical approach for structure-based prediction of carbohydrate-binding sites on proteins

A computer program system was developed to predict carbohydrate-bindingsites on three-dimensional (3D) protein structures. The programssearch for binding sites by referring to the empirical rulesderived from the known 3D structures of carbohydrate–proteincomplexes. A total of 80 non-redundant carbohydrate–proteincomplex structures were selected from the Protein Data Bankfor the empirical rule construction. The performance of theprediction system was tested on 50 known complex structuresto determine whether the system could detect the known bindingsites. The known monosaccharide-binding sites were detectedamong the best three predictions in 59% of the cases, whichcovered 69% of the polysaccharide-binding sites in the targetproteins, when the performance was evaluated by the overlapbetween residue patches of predicted and known binding sites. Received April 24, 2003; revised June 2, 2003; accepted June 10, 2003.     

Relationship between Expression of Onco-Related miRNAs and the Endoscopic Appearance of Colorectal Tumors

Accumulating data indicates that certain microRNAs (miRNAs or miRs) are differently expressed in samples of tumors and paired non-tumorous samples taken from the same patients with colorectal tumors. We examined the expression of onco-related miRNAs in 131 sporadic exophytic adenomas or early cancers and in 52 sporadic flat elevated adenomas or early cancers to clarify the relationship between the expression of the miRNAs and the endoscopic morphological appearance of the colorectal tumors. The expression levels of miR-143, -145, and -34a were significantly reduced in most of the exophytic tumors compared with those in the flat elevated ones. In type 2 cancers, the miRNA expression profile was very similar to that of the exophytic tumors. The expression levels of miR-7 and -21 were significantly up-regulated in some flat elevated adenomas compared with those in exophytic adenomas. In contrast, in most of the miR-143 and -145 down-regulated cases of the adenoma-carcinoma sequence and in some of the de novo types of carcinoma, the up-regulation of oncogenic miR-7 and/or -21 contributed to the triggering mechanism leading to the carcinogenetic process. These findings indicated that the expression of onco-related miRNA was associated with the morphological appearance of colorectal tumors.     

多晶YAG陶瓷的制备及力学性能

本实验采用共沉淀方法制备YAG微粉 ,Al和Y元素分布均匀 ,在 90 0℃煅烧 2h即可全部转变为YAG粉体 ,无过渡相 .15 0 0℃热压 1h可获得致密烧结体 ,其抗弯强度为 2 45MPa ,断裂韧性为 2 .0MPa·m1 /2 ,晶粒大小为 3～ 6μm ;14 0 0℃放电等离子烧结 5min可获得相对密度为 93 %的烧结体 ,其抗弯强度为 3 4 8MPa,断裂韧性为 2 .1MPa·m1 /2 ,晶粒大小为 1～ 2 μm .     

Poly(N‐isopropylacrylamide) gel‐based macroporous monolith for continuous‐flow recovery of palladium(II) ions

Macroporous monoliths, composed of thermoresponsive, tertiary‐aminated, and crosslinking monomers, were prepared for continuous‐flow separation of palladium(II) ions. N ‐Isopropylacrylamide was required to form the porous structure in the monoliths, indicating that the mechanism of porous structure formation involved polymerization‐induced phase separation of the poly(N ‐isopropylacrylamide) gel. Tertiary‐aminated monoliths showed adsorption selectivity for palladium(II) ions in hydrochloric media, compared with copper(II) ions. The maximum capacities of the monoliths with tertiary amine contents of 10, 20, 30, and 70 mol % for palladium(II) ions were 0.6, 1.1, 1.3, and 2.3 mmol/g, respectively. Darcy's permeabilities of water through the macroporous monolith were 10^?14 to 10^?13 m², and those were comparable to that through a commercially available membrane filter with a pore size of several micrometers. In the continuous‐flow process, the macroporous monolith with tertiary amine selectively adsorbed palladium(II) ions in the coexistence of copper(II) ions with 10 times higher concentration than the palladium(II) ions. The palladium(II) ions were eluted from the macroporous monolith, and the concentration of palladium(II) ions in the eluate was up to 45 times of that in the feed solution. The average enrichment factor and total recovery percentage of palladium(II) ions were 8.7 times and 95%, respectively. © 2016 Wiley Periodicals, Inc. J. Appl. Polym. Sci. 2017 , 134 , 44385.     

Highly Efficient Extraction of Rhodium(III) from Hydrochloric Acid Solution with Amide-Containing Tertiary Amine Compounds

Extraction of Rh(III) from a HCl solution with N,N-disubstituted amide–containing tertiary amine (ACTA) compounds (N,N-di-n-hexyl(N-methyl-N-n-octyl-ethylamide)amine (MonoAA), N-n-hexyl-bis(N-methyl-N-n-octyl-ethylamide)amine (BisAA), and tris(N-methyl-N-n-octyl-ethylamide)amine (TrisAA)) was investigated. The ACTAs extract Rh(III) more efficiently than tri-n-octylamine (TOA), and the extraction efficiency increases with increasing number of amide groups: TrisAA > BisAA > MonoAA ? TOA. For all ACTAs, the predominant Rh(III) complex extracted from 2 M HCl is probably {[RhCl₅(H₂O)]·(ACTA·H)₂}. The apparent basicity of the ACTAs and TOA varies in the opposite order from that observed for the Rh(III) extraction efficiency. Rh(III) can be readily back-extracted using 10 M HCl solution possessing a high selectivity over similarly loaded Pd(II) and Pt(IV).     

Growth and microstructure of Ba β-alumina films by laser chemical vapor deposition

Ba β-alumina films were prepared by laser chemical vapor deposition. Mostly single-phase Ba β-alumina films were obtained at 1125–1200 K and for an Al/Ba molar ratio of 12.4–16.6. BaAl₂O₄ and α-Al₂O₃ were codeposited with Ba β-alumina under Ba- and Al-rich conditions, respectively. The Ba β-alumina films consisted of hexagonal grains, and the (1 1 0)-oriented Ba β-alumina films had a fin-like columnar structure. The highest deposition rate reached 120 μm h^?1 at around 1200 K. A thin layer of Ba-rich superstructure was formed on the surface of the (1 1 0)-oriented columnar grains.     

Structure–Property Relationship in BT-Based Dielectrics for Ni-MLCC: Modification of Grain Boundary

Structure–property relationship in BaTiO₃ (BT)-based dielectrics for multi-layer ceramic capacitors with nickel internal electrode was investigated using samples having various HoO_3/2 concentrations by measuring temperature characteristics of capacitance, voltage–current characteristics, lifetime at highly accelerated life test, high-resolution analytical electron microscope, and frequency response at elevated temperature and ultra-low frequency. It was concluded that the addition of Ho affected the shell and grain boundary (GB) characteristics. Incorporation of Ho into BT perovskite lattice and the change in GB characteristics along with the doped concentration of HoO_3/2 were discussed to better understand the role of doped Ho₂O₃.     

Preparation of micro-dot electrodes of LiCoO2 and Li4Ti5O12 for lithium micro-batteries

Fabrications of micro-dot electrodes of LiCoO₂ and Li₄Ti₅O₁₂ on Au substrates were demonstrated using a sol-gel process combined with a micro-injection technology. A typical size of prepared dots was about 100 μm in diameter, and the dot population on the substrate was 2400 dots cm⁻². The prepared LiCoO₂ and Li₄Ti₅O₁₂ micro-dot electrodes were characterized with scanning electron microscopy, X-ray diffraction, micro-Raman spectroscopy, and cyclic voltammetry. The prepared LiCoO₂ and Li₄Ti₅O₁₂ micro-dot electrodes were evaluated in an organic electrolyte as cathode and anode for lithium micro-battery, respectively. The LiCoO₂ micro-dot electrode exhibited reversible electrochemical behavior in a potential range from 3.8 to 4.2 V versus Li/Li⁺, and the Li₄Ti₅O₁₂ micro-dot electrode showed sharp redox peaks at 1.5 V.     

Synthesis of a photoimmobilizable histidine polymer for surface modification

A novel photoreactive polymer with histidine polar groups was synthesized through the copolymerization of two types of methacrylic acid, one carrying histidine groups and the other carrying azidoaniline groups. The polymer was photoimmobilized on polyester disks for surface modification. The effect of the surface modification on the hydrophilic and biofouling properties was investigated. Static contact angle measurements showed that the polymeric surface was modified to be comparatively hydrophilic in the polymer‐immobilized region. Micropattern immobilization was carried out with a photolithographic method. Atomic force microscopy measurements showed that the polymer was formed on the disks in response to ultraviolet irradiation. Protein adsorption was reduced on the polymer‐immobilized regions, and in those regions, spreading and adhesion of mammalian cells were reduced in comparison with that in nonimmobilized regions. In conclusion, a novel histidine‐containing polymer was photoreactively immobilized on a conventional polymer surface, and it had reduced interaction with proteins and cells. © 2008 Wiley Periodicals, Inc. J Appl Polym Sci, 2009     

Enabling Electrocatalytic Fischer–Tropsch Synthesis from Carbon Dioxide Over Copper-based Electrodes

We report on the discovery that paraffins and olefins up to C₆ hydrocarbons can be obtained in CO₂ electroreduction at room temperature and atmospheric pressure by application of a commercially available Cu-electrode (Eurofysica), provided pretreatment by electropolishing is avoided. The product distribution follows the Schultz–Flory distribution and, depending on the applied potential, the chain growth probability (α) ranges from 0.23 to 0.31, values lower than those obtained in Fischer–Tropsch synthesis over heterogeneous Co- or Fe-based catalysts.