Numerical guidelines for setting up a k.p simulator with applications to quantum dot heterostructures and topological insulators

The k.p perturbation method for determination of electronic structure first pioneered by Kohn and Luttinger continues to provide valuable insight to several band structure features. This method has been adapted to heterostructures confined in up to three directions. In this paper, numerical details of setting up a k.p Hamiltonian using the finite difference approximation for such confined nanostructures is explicitly demonstrated. Nanostructures belonging to two different symmetry classes, namely, the cubic zincblende and rhombohedral crystals are considered. Rhombohedral crystals, of late, have gained prominence as candidates for the recently discovered topological insulator (TI) class of materials. Lastly, the incorporation of a strain field to the k.p Hamiltonian and the corresponding matrix equations for computing the intrinsic and an externally applied strain in heterostructures within a continuum approximation is shown. Two applications are considered (1) Computation of the eigen states of a multi-million zincblende InAs quantum dot with a stress-reducing InGaAs layer of varying Indium composition embedded in a GaAs matrix and (2) Dispersion of a rhombohedral TI \(\hbox {Bi}_{2}\hbox {Se}_{3}\) film and the necessary alteration in presence of proximity-induced superconductivity.     

Localized surface plasmon coupled fluorescence fiber-optic biosensor with gold nanoparticles

A novel fiber-optic biosensor based on a localized surface plasmon coupled fluorescence (LSPCF) system is proposed and developed. This biosensor consists of a biomolecular complex in a sandwich format of . It is immobilized on the surface of an optical fiber where a complex forms the fluorescence probe and is produced by mixing Cy5-labeled antibody and protein A conjugated gold nanoparticles (Au-PA). The LSPCF is excited by localized surface plasmon on the GNP surface where the evanescent field is applied near the core surface of the optical fiber. At the same time, the fluorescence signal is detected by a photomultiplier tube located beside the unclad optical fiber with high collection efficiency. Experimentally, this novel LSPCF biosensor is able to detect mouse immunoglobulin G (IgG) at a minimum concentration of 1 pg/mL (7 fM) during the biomolecular interaction of the IgG with anti-mouse IgG. The analysis is expanded by a discussion of the amplification of the LSPCF intensity by GNP coupling, and overall, this LSPCF biosensor is confirmed experimentally as a biosensor with very high sensitivity.     

Wavelet restoration of medical pulse-echo ultrasound images in an EM framework

The clinical utility of pulse-echo ultrasound images is severely limited by inherent poor resolution that impacts negatively on their diagnostic potential. Research into the enhancement of image quality has mostly been concentrated in the areas of blind image restoration and speckle removal, with little regard for accurate modeling of the underlying tissue reflectivity that is imaged. The acoustic response of soft biological tissues has statistics that differ substantially from the natural images considered in mainstream image processing: although, on a macroscopic scale, the overall tissue echogenicity does behave some-what like a natural image and varies piecewise-smoothly, on a microscopic scale, the tissue reflectivity exhibits a pseudo-random texture (manifested in the amplitude image as speckle) due to the dense concentrations of small, weakly scattering particles. Recognizing that this pseudorandom texture is diagnostically important for tissue identification, we propose modeling tissue reflectivity as the product of a piecewise-smooth echogenicity map and a field of uncorrelated, identically distributed random variables. We demonstrate how this model of tissue reflectivity can be exploited in an expectation-maximization (EM) algorithm that simultaneously solves the image restoration problem and the speckle removal problem by iteratively alternating between Wiener filtering (to solve for the tissue reflectivity) and wavelet-based denoising (to solve for the echogenicity map). Our simulation and in vitro results indicate that our EM algorithm is capable of producing restored images that have better image quality and greater fidelity to the true tissue reflectivity than other restoration techniques based on simpler regularizing constraints.     

A two-photon fluorescent probe for lipid raft imaging: C-laurdan

The lipid-rafts hypothesis proposes that naturally occurring lipid aggregates exist in the plane of membrane that are involved in signal transduction, protein sorting, and membrane transport. To understand their roles in cell biology, a direct visualization of such domains in living cells is essential. For this purpose, 6-dodecanoyl-2-(dimethylamino)naphthalene (laurdan), a membrane probe that is sensitive to the polarity of the membrane, has often been used. We have synthesized and characterized 6-dodecanoyl-2-[N-methyl-N-(carboxymethyl)amino]naphthalene (C-laurdan), which has the advantages of greater sensitivity to the membrane polarity, a brighter two-photon fluorescence image, and reflecting the cell environment more accurately than laurdan. Lipid rafts can be visualized by two-photon microscopy by using C-laurdan as a probe. Our results show that the lipid rafts cover 38 % of the cell surface.     

Natural organic matter stabilizes carbon nanotubes in the aqueous phase

This study investigates the aqueous stability of multi-walled carbon nanotubes (MWNTs) in the presence of natural organic matter (NOM). MWNTs were readily dispersed as an aqueous suspension in both model NOM (Suwannee River NOM (SR-NOM)) solutions and natural surface water (actual Suwannee River water with unaltered NOM background), which remained stable for over 1 month. Microscopic analyses suggested that the suspension consisted primarily of individually dispersed MWNTs. Concentrations of MWNTs suspended in the aqueous phase, quantified using thermal optical transmittance analysis (TOT), ranged from 0.6 to 6.9 mg/L as initial concentrations of MWNT and SR-NOM were varied from 50 to 500 mg/L and 10 to 100 mg/L, respectively. Suwannee River water showed a similar MWNT stabilizing capacity as compared to the model SR-NOM solutions. For the same initial MWNT concentrations, the concentrations of suspended MWNT in SR-NOM solutions and Suwannee River water were considerably higher than that in a solution of 1% sodium dodecyl sulfate, a commonly used surfactant to stabilize CNTs in the aqueous phase. These findings suggest that dispersal of carbon-based nanomaterials in the natural, aqueous environment might occur to an unexpected extent following a mechanism that has not been previously considered in environmental fate and transport studies.     

Evidence for organosulfates in secondary organic aerosol

Recent work has shown that particle-phase reactions contribute to the formation of secondary organic aerosol (SOA), with enhancements of SOA yields in the presence of acidic seed aerosol. In this study, the chemical composition of SOA from the photooxidations of alpha-pinene and isoprene, in the presence or absence of sulfate seed aerosol, is investigated through a series of controlled chamber experiments in two separate laboratories. By using electrospray ionization-mass spectrometry, sulfate esters in SOA produced in laboratory photooxidation experiments are identified for the first time. Sulfate esters are found to account for a larger fraction of the SOA mass when the acidity of seed aerosol is increased, a result consistent with aerosol acidity increasing SOA formation. Many of the isoprene and alpha-pinene sulfate esters identified in these chamber experiments are also found in ambient aerosol collected at several locations in the southeastern U.S. It is likely that this pathway is important for other biogenic terpenes, and may be important in the formation of humic-like substances (HULIS) in ambient aerosol.     

How does infiltration behavior modify the composition of ambient PM2.5 in indoor spaces? An analysis of RIOPA data

The indoor environment is an important venue for exposure to fine particulate matter (PM2.5) of ambient (outdoor) origin. In this work, paired indoor and outdoor PM2.5 species concentrations from three geographically distinct cities (Houston, TX, Los Angeles County, CA, and Elizabeth, NJ) were analyzed using positive matrix factorization (PMF) and demonstrate that the composition and source contributions of ambient PM2.5 are substantially modified by outdoor-to-indoor transport. Our results suggest that predictions of "indoor PM2.5 of ambient origin" are improved when ambient PM2.5 is treated as a combination of four distinct particle types with differing infiltration behavior (primary combustion, secondary sulfate and organics, secondary nitrate, and mechanically generated PM) rather than as a "single internally mixed entity". Study-wide average infiltration factors (i.e., fraction of ambient PM2.5 found indoors) for Relationship of Indoor, Outdoor, and Personal Air (RIOPA) study homes were 0.51, 0.78, and 0.04 (consistent with P = 0.6, 0.9, and 0.09; k = 0.2, 0.1, and 0.6 h(-1)) for PM2.5 associated with primary combustion, secondary formation (excluding nitrate), and mechanical generation, respectively. Modification of the composition, properties, and source contributions of ambient PM2.5 in indoor environments has important implications for exposure mitigation strategies, development of health hypotheses, and evaluation of exposure error in epidemiological studies that use ambient central-site PM2.5 as a surrogate for PM2.5 exposure.     

Chitosan-TPP nanoparticle as a release system of antisense oligonucleotide in the oral environment

Antisense oligonucleotide loaded chitosan nanoparticles were prepared and the release of oligonucleotide from chitosan-TPP/oligonucleotide nanoparticles was investigated. Morphological property, zeta potential and particle size of the prepared chitosan/oligonucleotide nanoparticles were investigated using Field Emission-Scanning Electron Microscope (FE-SEM) and particle size analyzer. The interaction between chitosan and oligonucleotide was confirmed by using capillary zone electrophoresis (CZE), and the released oligonucleotides were determined by spectrophotometric method. Oligonucleotides formed the complexes with chitosan with a unique morphological property. The release of oligonucleotides from nanoparticles was dependent on loading methods and pH conditions. Chitosan/oligomer-TPP nanoparticles, which was prepared by adding TPP after the formation of chitosan/oligonucleotide complex, showed the lowest release percent of oligonucleotides with 41.3% at pH 7.0 among the loading methods. The percent release of oligonucleotide from oligonucleotide loaded chitosan nanoparticle at pH 10 was higher than the one in acidic condition (pH 5.0). The released oligonucleotides from chitosan/oligonucleotide nanoparticles were stable enough for 12 h under the 20% saliva solution. Our results suggest that the sustained release of oligonucleotide from chitosan nanoparticles may be suitable for the local therapeutic application in periodontal diseases.