A comparison of gene organization in the zwf region of the genomes of the cyanobacteria Synechococcus sp. PCC 7942 and Anabaena sp. PCC 7120

The region of the genome encoding the glucose-6-phosphate dehydrogenase gene zwf was analysed in a unicellular cyanobacterium, Synechococcus sp. PCC 7942, and a filamentous, heterocystous cyanobacterium, Anabaena sp. PCC 7120. Comparison of cyanobacterial zwf sequences revealed the presence of two absolutely conserved cysteine residues which may be implicated in the light/dark control of enzyme activity. The presence in both strains of a gene fbp, encoding fructose-1,6-bisphosphatase, upstream from zwf strongly suggests that the oxidative pentose phosphate pathway in these organisms may function to completely oxidize glucose 6-phosphate to CO2. The amino acid sequence of fructose-1,6-bisphosphatase does not support the idea of its light activation by a thiol/disulfide exchange mechanism. In the case of Anabaena sp. PCC 7120, the tal gene, encoding transaldolase, lies between zwf and fbp.     

On the deformation of circular cylindrical rubber bars under axial thrust

Summary The axisymmetric bulging of circular cylindrical rubber bars under end thrust is investigated. The results for different forms of the strain energy function are compared with experimental results.With 2 Figures     

Protein phosphorylation: technologies for the identification of phosphoamino acids

Protein phosphorylation plays a central role in many biological and biomedical phenomena. In this review, while a brief overview of the occurrence and function of protein phosphorylation is given, the primary focus is on studies related to the detection and analysis of phosphorylation both in vivo and in vitro. We focus on phosphorylation of serine, threonine and tyrosine, the most commonly phosphorylated amino acids in eukaryotes. Technologies such as radiolabelling, antibody recognition, chromatographic methods (HPLC, TLC), electrophoresis, Edman sequencing and mass spectrometry are reviewed. We consider the speed, simplicity and sensitivity of tools for detection and identification of protein phosphorylation, as well as quantitation and site characterisation. The limitations of currently available methods are summarised.     

Determination of the epitope of an inhibitory antibody to proliferating cell nuclear antigen

We identified an expansion of the CAG trinucleotide repeat in the coding region of the Machado-Joseph disease gene in 7 of 24 American families diagnosed with autosomal dominant ataxia. All affected individuals were heterozygous for an expanded allele that ranged from 67 to more than 200 CAG repeats, whereas the normal allele had 14 to 33 repeats. In contrast to the Azorean-Portuguese origins of Machado-Joseph disease, the two largest American families were of German and Dutch-African descent. Clinical, pathologic, and genetic evaluations suggest that American families with spinocerebellar ataxia type 3 differ from those with Machado-Joseph disease by their ethnic origins, predominant spinopontine atrophy, lack of dystonic features, and larger CAG repeat expansion.     

The difficultly extractable lipides of cottonseed meats,their composition and effect on the refining characteristics of the crude oils

Summary and Conclusions Crude lipides fractions were produced from raw, tempered, and cooked meats from two lots of cottonseed by a series of successive stepwise extractions, designed to obtain fractional portions of the total lipides in the order of the difficulty of their extraction. The proximate composition of the crude lipides fractions was determined. It was found that the composition of successive lipides fractions varied with the degree of exhaustiveness of extraction. The fractions obtained by more exhaustive extraction contained greater amounts of undesirable non-neutral oil material and lesser amounts of desirable neutral oil. It was also established that the method used in preparing meats for extraction was of paramount importance in its effect on the composition of the crude lipides obtained. The crude lipides fractions from raw and tempered meats contained large amounts of impurities while the crude lipides fractions similarly obtained from cooked meats were relatively low in impurities. Crude oils equivalent to varying degrees of total lipides extraction were reconstituted from the crude lipides fractions and evaluated for refining characteristics. The impurities content of the reconstituted oils varied as the degree of total lipides extraction and increases in the impurities content of the oils were generally reflected in disproportionate increases in refining losses and/or refined oil color. The oils obtained from the cooked meats at all degrees of extraction were outstandingly low in refining losses as compared to the oils from the raw and the tempered meats. Presented in two parts at the spring meeting, American Oil Chemists’ Society, New Orleans. La., Apr. 18–20, 1955, and at the fall meeting, Philadelphia, Pa., Oct. 10–12, 1995. One of the laboratories of the Southern Utilization Research Branch, Agricultural Research Service, U. S. Department of Agriculture.     

Exploring Virtual Librarianship: Second Life Library 2.0

ABSTRACT

In April 2006, Alliance Library System and Online Programming for All Libraries partnered to start the Second Life Library 2.0 in the online world Second Life and in August 2006 purchased an island on the Teen grid of Teen Second Life. Second Life is a virtual world, a descendant of multiplayer online games. Educational institutions have recently been drawn into Second Life's robust economy and vibrant cultural life. The Second Life Library 2.0 works with librarians from around the world and with other educational partners such as TechSoup, WorldBridges, and the New Media Consortium. Second Life Library 2.0 provides “traditional” library services such as ready reference, book discussions, and search assistance, but, at heart, it explores what it means to be a virtual library in a virtual world.     

Application of polymerase chain reaction for the correlation of Salmonella serovars recovered from greyhound feces with their diet

The polymerase chain reaction was employed to correlate Salmonella serovars isolated from fecal material of greyhounds suffering from gastroenteritis with those isolated from the diet fed to the greyhounds prior to onset of diarrhea. Kennels around the Abilene, Kansas, area were contacted and supplied with materials needed to collect a portion of the diet each day. With the onset of diarrhea, the kennels were instructed to ship the fecal material and diet from the previous 10 days to the laboratory for testing. Forty-one fecal samples and corresponding diets were screened for Salmonella, Clostridium perfringens, Campylobacter jejuni, Staphylococcus aureus, Staphylococcus intermedius, and pathogenic (piliated) Escherichia coli by direct culture using standard procedures. The fecal material was also screened for coronavirus and parvovirus using electron microscopy. Thirty-five "normal" fecal samples were screened for all of the above mentioned microorganisms as a control. In addition, the fecal material was screened for E. coli verotoxins I and II and clostridial enterotoxins. A total of 61 Salmonella isolates were recovered from the 41 samples of feces and diet submitted for testing; 31 were recovered from the feces and 30 from the diet. Four Salmonella isolates were recovered from the normal fecal samples. Results obtained by PCR, plasmid profiles, antigenic analysis, and antibiogram profiles indicated that 16 of the 31 isolates recovered from the fecal material were the same strain as that recovered from the diet.     

Population shift bias in tests of space–time interaction

Common to all tests of space–time interaction is the assumption that the population underlying the events of interest exhibits a trajectory of growth that is consistent through time and across space. In practice, however, this assumption is often untenable and, when violated, can introduce population shift bias into the results of these tests. While this problem is widely recognized, more work remains to compare its effect across tests and to determine the extent to which it is a problem for study short periods. This paper quantifies and compares the population shift bias present in the results of the Knox, Mantel, and Jacquez tests of space–time interaction. A simulation study is carried out which quantifies the bias present in each test across a variety of population movement scenarios. Results show a positive relationship between population shift bias and the heterogeneity in population growth across all the tests. They also demonstrate variability in the size of the bias across the three tests for space–time interaction considered. Finally, the results illustrate that population shift bias can be a serious problem for short study periods. Collectively, these findings suggest that an unbiased approach to assessing the significance of space–time interaction test results is needed whenever spatially heterogeneous population change is identified within a study area.     

Broadband and knowledge intensive firm clusters: Essential link or auxiliary connection?

This study evaluates the relationship between the spatial distribution of broadband providers and the presence of knowledge intensive firm clusters in US counties. Results highlight this relationship is heterogeneous and localized. In some places, broadband appears to be an essential link that enables knowledge firms to strategically locate in lower cost counties and in close proximity to major knowledge centres. In other places, the availability of broadband Internet connections are unable the negative externalities associated with locations in more remote areas of the country. From a policy perspective, this suggests that broadband should be viewed as a key component, but not the only component, of comprehensive local economic development plans.