A multi-objective strategy in genetic algorithms for gene selection of gene expression data

A microarray machine offers the capacity to measure the expression levels of thousands of genes simultaneously. It is used to collect information from tissue and cell samples regarding gene expression differences that could be useful for cancer classification. However, the urgent problems in the use of gene expression data are the availability of a huge number of genes relative to the small number of available samples, and the fact that many of the genes are not relevant to the classification. It has been shown that selecting a small subset of genes can lead to improved accuracy in the classification. Hence, this paper proposes a solution to the problems by using a multiobjective strategy in a genetic algorithm. This approach was tried on two benchmark gene expression data sets. It obtained encouraging results on those data sets as compared with an approach that used a single-objective strategy in a genetic algorithm. This work was presented in part at the 13th International Symposium on Artificial Life and Robotics, Oita, Japan, January 31–February 2, 2008     

Implementation of genetic algorithm in an embedded microcontroller-based polarization control system

Implementation of genetic algorithm in a PIC32MX microcontroller-based polarization control system is proposed and demonstrated. The controller measures the signal intensity that is used to estimate the genetic value. This process is controlled by the genetic algorithm rather than referring to the Look-Up-Table as implemented in existing solutions. To reach optimum performance, the code is optimized by using the best genetic parameters so that the fastest execution time can be achieved. An ability of genetic algorithm to work efficiently in polarization control system possesses many advantages including easy code construction, low memory consumption and fast control speed. Genetic algorithm is intelligent enough to be used for endless polarization stabilization and in the worst case, able to stabilize the polarization changes in 300 μs. In the best case the response time can reach 17 μs.     

The development of spectral indices for early detection of Ganoderma disease in oil palm seedlings

Field spectroscopy is a rapid and non-destructive analytical technique that may be used for assessing plant stress and disease. The objective of this study was to develop spectral indices for detection of Ganoderma disease in oil palm seedlings. The reflectance spectra of oil palm seedlings from three levels of Ganoderma disease severity were acquired using a spectroradiometer. Denoizing and data transformation using first derivative analysis was conducted on the original reflectance spectra. Then, comparative statistical analysis was used to select significant wavelength from transformed data. Wavelength pairs of spectral indices were selected using optimum index factor. The spectral indices were produced using the wavelength ratios and a modified simple ratio method. The relationship analysis between spectral indices and total leaf chlorophyll (TLC) was conducted using regression technique. The results suggested that six spectral indices are suitable for the early detection of Ganoderma disease in oil palm seedlings. Final results after regression with TLC showed that Ratio 3 is the best spectral index for the early detection of Ganoderma infection in oil palm seedlings. For future works, this can be used for the development of robust spectral indices for Ganoderma disease detection in young and mature oil palm using airborne hyperspectral imaging.     

Experiments on Surface Reconstruction for Partially Submerged Marine Structures

Over the past 10 years, significant scientific effort has been dedicated to the problem of three‐dimensional (3‐D) surface reconstruction for structural systems. However, the critical area of marine structures remains insufficiently studied. The research presented here focuses on the problem of 3‐D surface reconstruction in the marine environment. This paper summarizes our hardware, software, and experimental contributions on surface reconstruction over the past few years (2008–2011). We propose the use of off‐the‐shelf sensors and a robotic platform to scan marine structures both above and below the waterline, and we develop a method and software system that uses the Ball Pivoting Algorithm (BPA) and the Poisson reconstruction algorithm to reconstruct 3‐D surface models of marine structures from the scanned data. We have tested our hardware and software systems extensively in Singapore waters, including operating in rough waters, where water currents are around 1–2 m/s. We present results on construction of various 3‐D models of marine structures, including slowly moving structures such as floating platforms, moving boats, and stationary jetties. Furthermore, the proposed surface reconstruction algorithm makes no use of any navigation sensor such as GPS, a Doppler velocity log, or an inertial navigation system.     

Effects of computer-based educational achievement test on test performance and test takers’ motivation

There has been an increasing interest in recent years in developing and using computer-based tests in educational assessment. To replace paper-based tests with computer-based ones, the standards for developing computerized-assessment (International Test Commission., 2004) requires equivalent test scores to be established for the new computer-based test and the conventional paper-based test. However, in most test mode comparability studies, the actual test items used have been identical, and yet significant differences have been found in test scores in paper-based and computer-based modes. This has been reported for several subjects, including science, languages and mathematics. The validity of using computer-based tests in educational assessment must therefore be questioned. This study involves a biology test and a biology motivation questionnaire using a Solomon four-group experimental design to examine the validity of the computer-based test and its effects on test performance and the motivation of test-takers. The findings provide supportive evidence for the validity of computer-based test in educational assessment.     

Usability evaluation of a virtual reality smartphone app for a living museum

This paper elaborates the empirical evidence of a usability evaluation of a VR and non-VR virtual tour application for a living museum. The System Usability Scale (SUS) was used in between participants experiments (Group 1: non-VR version and Group 2: VR version) with 40 participants. The results show that the mean scores of all components for the VR version are higher compared to the non-VR version, overall SUS score (72.10 vs 68.10), usability score (75.50 vs 71.70), and learnability (58.40 vs 57.00). Further analysis using a two-tailed independent t test showed no difference between the non-VR and VR versions. Additionally, no significant difference was observed between the groups in the context of gender, nationality, and prior experience (other VR tour applications) for overall SUS score, usability score, and learnability score. Α two-tailed independent t test indicated no significant difference in the usability score between participants with VR experience and no VR experience. However, a significant difference was found between participants with VR experience and no VR experience for both SUS score (t(38) = 2.17, p = 0.037) and learnability score (t(38) = 2.40, p = 0.021). The independent t test results indicated a significant difference between participant with and without previous visits to SCV for the usability score (t(38) = −2.31, p = 0.027), while there was no significant differences observed in other components. It can be concluded that both versions passed based on the SUS score. However, the sub-scale usability and learnability scores indicated some usability issue.

     

An integration of enhanced social force and crowd control models for high-density crowd simulation

Neural Computing and Applications - Social force model is one of the well-known approaches that can successfully simulate pedestrians’ movements realistically. However, it is not suitable to...     

Simulation model for natural gas transmission pipeline network system

This paper focuses on developing a simulation model for the analysis of transmission pipeline network system (TPNS) with detailed characteristics of compressor stations. Compressor station is the key element in the TPNS since it provides energy to keep the gas moving. The simulation model is used to create a system that simulates TPNS with different configurations to get pressure and flow parameters. The mathematical formulations for the TPNS simulation were derived from the principles of flow of fluid through pipe, mass balance and compressor characteristics. In order to determine the unknown pressure and flow parameters, a visual C++ code was developed based on Newton–Raphson solution technique. Using the parameters obtained, the model evaluates the energy consumption for various configurations in order to guide for the selection of optimal TPNS. Results from the evaluations of the model with the existing TPNS and comparison with the existing approaches showed that the developed simulation model enabled to determine the operational parameters with less than 10 iterations. Hence, the simulation model could assist in decisions regarding the design and operations of the TPNS.     

Adapting technology: effect of high-involvement HRM and organisational trust

This study is designed to empirically test a model of high-involvement human resource management (HIHRM), organisational trust, and technology adaptation grounded on social exchange theory in the context of the private banking sector. The proposed model intends to add to the understanding of the effect of HIHRM on technology adaptation via the mediating influence of organisational trust. Frontline employees were surveyed using a self-administered questionnaire. Results from partial least square-structural equation modelling suggest that there is a significant influence of HIHRM on technology adaptation. Organisational trust further mediates the relationship. Thus, this paper finds an answer to the ‘black box’ of human resource management (HRM) practices, explaining how HIHRM influences employees’ attitudes towards technology adaptation. The study can help management have a better understanding of the importance of employee involvement-oriented HRM in introducing and implementing a new technology through the integration of trust processes in the organisation.