Aptamer-based optical biosensor for rapid and sensitive detection of 17β-estradiol in water samples

Required routine monitoring of endocrine disrupting compounds (EDCs) in water samples, as posed by EPA Unregulated Contaminant Regulation (UCMR3), demands for cost-effective, reliable and sensitive EDC detection methods. This study reports a reusable evanescent wave aptamer-based biosensor for rapid, sensitive and highly selective detection of 17β-estradiol, an EDC that is frequently detected in environmental water samples. In this system, the capture molecular, β-estradiol 6-(O-carboxy-methyl)oxime-BSA, was covalently immobilized onto the optical fiber sensor surface. With an indirect competitive detection mode, samples containing different concentrations of 17β-estradiol were premixed with a given concentration of fluorescence-labeled DNA aptamer, which highly specifically binds to 17β-estradiol. Then, the sample mixture is pumped to the sensor surface, and a higher concentration of 17β-estradiol leads to less fluorescence-labeled DNA aptamer bound to the sensor surface and thus to lower fluorescence signal. The dose-response curve of 17β-estradiol was established and a detection limit was determined as 2.1 nM (0.6 ng mL(-1)). The high specificity and selectivity of the sensor were demonstrated by evaluating its response to a number of potentially interfering EDCs. Potential interference of real environmental sample matrix was assessed by spiked samples in several tertiary wastewater effluents. The sensor can be regenerated with a 0.5% SDS solution (pH 1.9) over tens of times without significant deterioration of the sensor performance. This portable sensor system can be potentially applied for on-site real-time inexpensive and easy-to-use monitoring of 17β-estradiol in environmental samples such as effluents or water bodies.     

Topographic and biomechanical evaluation of cornea in patients with ichthyosis vulgaris

PurposeTo compare the topographic and biomechanical properties of corneas in eyes of patients with ichthyosis vulgaris (IV) and eyes of healthy individuals.MethodsThirty healthy individuals (control group) and 30 patients with IV (study group) were enrolled in this prospective study. Topographic measurements, including keratometry values, irregularity, and surface asymmetry index in the right eye of each participant were obtained using Scheimpflug camera with a Placido disc topographer (Sirius). Corneal hysteresis (CH), corneal resistance factor (CRF), corneal-compensated intraocular pressure (IOPcc) and Goldman-related intraocular pressure (IOPg) were measured using the Reichert Ocular Response Analyzer (ORA). Central corneal thickness (CCT) was also measured with ultrasonic pachymetry and the Sirius corneal topography system.ResultsTopographic parameters were not significantly different between both groups (p > 0.05). Although mean CH was not significantly different between the groups, the CRF was significantly lower in patients with IV (p = 0.249 and p = 0.005, respectively). The CCT was significantly lower in patients with IV compared to healthy controls (p < 0.001). The IOPg and IOPcc were significantly lower in the patients with ichthyosis than in healthy controls (p = 0.001 and p = 0.004, respectively).ConclusionsThe study demonstrated that while the eyes of patients with IV had corneal topographic findings and corneal hysteresis similar to those of healthy controls, some of corneal biomechanical properties such CRF and CCT and IOP values such as IOPg and IOPcc were significantly lower in patients with IV. These results should be taken into account when planning a corneal refractive surgery and glaucoma screening for patients with IV.     

Analog circuit sizing via swarm intelligence

Together with the increase in electronic circuit complexity, the design and optimization processes have to be automated with high accuracy. Predicting and improving the design quality in terms of performance, robustness and cost is the central concern of electronic design automation. Generally, optimization is a very difficult and time consuming task including many conflicting criteria and a wide range of design parameters. Particle swarm optimization (PSO) was introduced as an efficient method for exploring the search space and handling constrained optimization problems. In this work, PSO has been utilized for accommodating required functionalities and performance specifications considering optimal sizing of analog integrated circuits with high optimization ability in short computational time. PSO based design results are verified with SPICE simulations and compared to previous studies.     

Experimental investigation on transverse low-speed impact behavior of adhesively bonded similar and dissimilar clamped plates

This experimental study investigates the low-speed impact behavior of adhesively bonded similar (Al–Al, St–St) and dissimilar (Al–St, St–Al) plates. The after-impact geometries of the front and back faces of the bonded plates, which were visualized by measuring the displacements, were in good agreement with the simulated surface geometries obtained by using explicit finite element method. The plate stiffness was affective on the deflections of the bonded plates; thus, the bonded Al–Al plates exhibited maximum deflections, contact durations, and minimal contact force levels, whereas the bonded St–St plates had minimum deflections, contact durations, and maximum contact force levels. As the impact energy is increased, the impact forces, durations, and deflections increased naturally; however, the impact force-time histories were not affected evidently. The bonded Al–Al plates can dissipate the impact energy more effectively than the bonded St–St plates. The experimental and simulated contact force-time histories were generally in good agreement. Based on the cross-section photographs of the damaged impact regions the bonded Al–Al plates with low stiffness can deform plastically and dissipate most of the impact energy, and the adhesive layer remains compatible with the deformation of the plates. The interfacial fractures appear along the back plate–adhesive interface for the low impact energy but along both front and back plate–adhesive interfaces and cracks propagated to the back interface to lower interface through the adhesive thickness near the boundaries of the impactor trace. The bonded St–St plates behave more rigid, transmit the impact energy directly to the adhesive layer and the high impact force distributions result severe fractures not only interfacially but also through the adhesive thickness. The color transformations, which are indications of fracture formation and propagation speed in some way, were observed around the adhesive fractures. Although the bonded St–Al and Al–St plates had a fracture mechanism similar to those of the bonded Al–Al plates but the color transformation near the fractures and the crack opening displacement levels were more evident. The existence of a stiffer plate affects considerably the damage formation in the adhesive layer and in the plates, whereas the less stiff plates can dissipate the impact energy by deforming plastically and the adhesive layer experiences less local damages.     

Drift estimation using pairwise slope with minimum variance in wireless sensor networks

Time synchronization is mandatory for applications and services in wireless sensor networks which demand common notion of time. If synchronization to stable time sources such as Coordinated Universal Time (UTC) is required, employing the method of flooding in order to provide time synchronization becomes crucial. In flooding based time synchronization protocols, current time information of a reference node is periodically flooded into the network. Sensor nodes collect the time information of the reference node and perform least-squares regression in order to estimate the reference time. However, least-squares regression exhibits a poor performance since sensor nodes far away from the reference node collect the time information with large deviations. Due to this fact, the slopes of their least-squares line exhibit large errors and instabilities. As a consequence, the reference time estimates of these nodes also exhibit large errors.This paper proposes a new slope estimation strategy for linear regression to be used by flooding based time synchronization protocols. The proposed method, namely Pairwise Slope With Minimum Variance (PSMV), calculates the slope of the estimated regression line by considering the pairwise slope between the earliest and the most recently collected data points. The PSMV slope is less affected by the large errors on the received data, i.e. it is more stable, and it is more computationally efficient when compared to the slope of the least-squares line. We incorporated PSMV into two flooding based time synchronization protocols, namely Flooding Time Synchronization Protocol (FTSP) and PulseSync. Experimental results collected from a testbed setup including 20 sensor nodes show that PSMV strategy improves the performance of FTSP by a factor of 4 and preserves the performance of PulseSync in terms of synchronization error with 40% less CPU overhead for linear regression. Our simulations show that these results also hold for networks with larger diameters and densities.     

rGO/CuO/PEDOT nanocomposite formation,its characterisation and electrochemical performances for supercapacitors

ABSTRACT

Supercapacitor properties of rGO, CuO, PEDOT and rGO/CuO at [rGO]_o/[CuO]_o?=?1:1; 1:1.5; 1:2 and rGO/CuO/PEDOT nanocomposite at [rGO]_o/[CuO]_o/[EDOT]_o?=?1:1:1; 1:1:3; 1:1:5 were investigated using chemical reduction of GO and in-situ polymerisation process. SEM-EDX, HRTEM, BET surface area analysis confirm the nanocomposite formations. Nanocomposite materials are also analysed through FTIR-ATR, Raman, TGA-DTA, GCD, CV and EIS. The highest specific capacitance of C _sp?=?156.7 F/g at 2?mV/s is determined as rGO/CuO/PEDOT at [rGO]_o/[CuO]_o/[EDOT]_o?=?1:1:5. In addition, two-electrode supercapacitor device for rGO/CuO/PEDOT at [rGO]_o/[CuO]_o/[EDOT]_o?=?1:1:5 are found to provide a maximum specific energy (E?=?14.15 Wh/kg at 20?mA) and specific power (P?=?24730 W/kg at 50?mA), electrical serial resistance (ESR?=?13.33 Ω) with good capacity retention after 3000 cycles. An equivalent circuit model of LR1(CR2)(QR3) is proposed to interpret the EIS data. The supercapacitor performance of the rGO/CuO/PEDOT nanocomposite electrode indicates the synergistic effect of hybrid supercapacitors.     

Size optimization of a PV/wind hybrid energy conversion system with battery storage using response surface methodology

This paper aims to show the use of the response surface methodology (RSM) in size optimization of an autonomous PV/wind integrated hybrid energy system with battery storage. RSM is a collection of statistical and mathematical methods which relies on optimization of response surface with design parameters. In this study, the response surface, output performance measure, is the hybrid system cost, and the design parameters are the PV size, wind turbine rotor swept area and the battery capacity. The case study is realized in ARENA 10.0, a commercial simulation software, for satisfaction of electricity consumption of the global system for mobile communications (GSM) base station at Izmir Institute of Technology Campus Area, Urla, Turkey. As a result, the optimum PV area, wind turbine rotor swept area, and battery capacity are obtained to be 3.95 m², 29.4 m², 31.92 kWh, respectively. These results led to $37,033.9 hybrid energy system cost, including auxiliary energy cost. The optimum result obtained by RSM is confirmed using loss of load probability (LLP) and autonomy analysis.     

Assessment of the Axial Load Response of an H Pile Driven in Multilayered Soil

Most of the current design methods for driven piles were developed for closed-ended pipe piles driven in either pure clay or clean sand. These methods are sometimes used for H piles as well, even though the axial load response of H piles is different from that of pipe piles. Furthermore, in reality, soil profiles often consist of multiple layers of soils that may contain sand, clay, silt or a mixture of these three particle sizes. Therefore, accurate prediction of the ultimate bearing capacity of H piles driven in a mixed soil is very challenging. In addition, although results of well documented load tests on pipe piles are available, the literature contains limited information on the design of H piles. Most of the current design methods for driven piles do not provide specific recommendations for H piles. In order to evaluate the static load response of an H pile, fully instrumented axial load tests were performed on an H pile (HP?310×110) driven into a multilayered soil profile consisting of soils composed of various amounts of clay, silt and sand. The base of the H pile was embedded in a very dense nonplastic silt layer overlying a clay layer. This paper presents the results of the laboratory tests performed to characterize the soil profile and of the pile load tests. It also compares the measured pile resistances with those predicted with soil property- and in situ test-based methods.     

Achieving compatibility in blends of low‐density polyethylene/polyamide‐6 with addition of ethylene vinyl acetate

Polymer alloys and blends, whose major advantage is the potential of achieving a range of physical and mechanical properties, have continued to be a subject of interest over recent years. Addition of a block or graft copolymer, with chemically similar segments to those involved in the polymer blend considered, led to a variety of desirable properties. The copolymer added to the blend functioned to promote a homogeneous dispersion of the constituent phases and to enhance their mutual adhesion. Such agents that enable better dispersion in polymer blends are known as compatibilizers. In this study an attempt has been made to improve the compatibility in a polymer blend composed of two normally incompatible constituents, LDPE and PA₆, by addition of a compatibilizer. The compatibilizer agent, ethylene vinyl acetate (EVA), was added to the polymer blend in ratios of 1, 5, and 10% by using a twin‐screw extruder. The effect of EVA on the crystallization of the polymer constituents was observed through DSC examinations. Furthermore, the control sample and all three blends of LDPE/PA₆/EVA were subjected to examinations to obtain their yield and tensile strengths, elasticity modulus, percentage elongation, izod impact strength, hardness, and melt flow index. © 2001 John Wiley & Sons, Inc. J Appl Polym Sci 82: 1748–1754, 2001     

Incidence and antibiotic resistance of Salmonella spp. on raw chicken carcasses

The current study was carried out to detect Salmonella spp. contamination on chicken carcasses and to determine the antibiotic susceptibility profiles and serotype distribution of the isolates. A total of 200 packaged fresh raw chicken samples sold at retail in different markets in central Anatolia were analysed between April 2005 and March 2006. Salmonella spp. was detected in 34% (68/200) of samples using cultural technique and were confirmed by PCR. Ten Salmonella serovars were identified; predominant ones included Typhimurium, Infantis and Heidelberg. All of the Salmonella spp. isolates tested, exhibited resistance to one or more antimicrobial agents used. Resistance to penicillin, oxacillin, clindamycin, vancomycin, erythromycin and ampicillin were evident 100%, 97%, 97%, 92.6%, 89.7% and 85.2%, respectively. Also resistance to tetracycline (67.6%), streptomycin (61.7%), neomycin (55.8%) and cephalothin (52.9%) was observed but a small percentage of the isolates demonstrated resistance to gentamicin (14.7%), chloramphenicol (10.2%), cefotaxime (2.9%) and amikacin (2.9%). As a result, high prevalence of Salmonella spp. and the relatively high resistance among the bacteria tested could pose public health and therapeutic problems in consumers as potential vehicle of resistant Salmonella foodborne infections. To avoid Salmonella contamination, hygienic rules of slaughter and poultry meat processing must be rigorously observed and antibiotic use must be controlled by governmental agencies to prevent increased resistance of antibiotics.