Bio-methanol: How energy choices in the western United States can help mitigate global climate change

Converting available biomass from municipal, agricultural and forest wastes to bio-methanol can result in significant environmental and economic benefits. Keeping these benefits in mind, one plausible scenario discussed here is the potential to produce energy using bio-methanol in five states of the western United States. In this scenario, the bio-methanol produced is from different biomass sources and used as a substitute for fossil fuels in energy production. In the U.S. West, forest materials are the dominant biomass waste source in Idaho, Montana, Oregon and Washington, while in California, the greatest amount of available biomass is from municipal wastes. Using a 100% rate of substitution, bio-methanol produced from these sources can replace an amount equivalent to most or all of the gasoline consumed by motor vehicles in each state. In contrast, when bio-methanol powered fuel cells are used to produce electricity, it is possible to generate 12–25% of the total electricity consumed annually in these five states.As a gasoline substitute, bio-methanol can optimally reduce vehicle C emissions by 2–29 Tg of C (23–81% of the total emitted by each state). Alternatively, if bio-methanol supported fuel cells are used to generate electricity, from 2 to 32 Tg of C emissions can be avoided. The emissions avoided, in this case, could equate to 25–32% of the total emissions produced by these particular western states when fossil fuels are used to generate electricity. The actual C emissions avoided will be lower than the estimates here because C emissions from the methanol production processes are not included; however, such emissions are expected to be relatively low. In general, there is less carbon emitted when bio-methanol is used to generate electricity with fuel cells than when it is used as a motor vehicle fuel.In the state of Washington, thinning “high-fire-risk” small stems, namely 5.1–22.9 cm diameter trees, from wildfire-prone forests and using them to produce methanol for electricity generation with fuel cells would avoid C emissions of 3.7–7.3 Mg C/ha. Alternatively, when wood-methanol produced from the high-fire-risk wood is used as a gasoline substitute, 3.3–6.6 Mg C/ha of carbon emissions are avoided. If these same “high-fire-risk” woody stems were burned during a wildfire 7.9 Mg C/ha would be emitted in the state of Washington alone. Although detailed economic analyses of producing methanol from biomass are in its infancy, we believe that converting biomass into methanol and substituting it for fossil-fuel-based energy production is a viable option in locations that have high biomass availability.     

Aciduric, pH-Elevating Bacillus which Cause Noneffervescent Spoilage of Underprocessed Tomatoes

In the preliminary phase of this study, a selective isolation medium was developed. Using the new medium, 24 strains of Bacillus Spp. that elevate tomato juice pH were isolated from garden soil or natural vegetative materials. Two jars of home-canned, water-bathed tomatoes contained sporeformers which produced noneffervescent spoilage. All strains were morphologically and physiologically different from 2 flat-sour strains of B. coagulans and B. licheniformis strains, but similar to a previous isolate from home-canned, spoiled green beans that elevated pH. The new medium may have future applications in isolation and enumeration of other acidurics including yeast-like microorganisms.     

Specific glucocorticoid receptor in the iris--ciliary body of the rabbit

The cytoplasm of the iris--ciliary body of the rabbit contains a receptor capable of specifically binding dexamethasone. This binding protein has a high affinity for dexamethasone (average KD = 2.0 X 10(-8) M), a low capacity (average 4.8 X 10(-13) mol of steroid bound per milligram of protein), and extreme heat sensitivity; it exhibits a pattern of competition virtually identical to that obtained with glucocorticoid receptors from other tissues and shows characteristic physicochemical behavior in various salt concentrations. The demonstration of a specific dexamethasone receptor in the iris--ciliary body provides the first direct biochemical evidence that these tissues may function as a target organ for glucocorticoids.     

Antimicrobial peptides and their superior fluorinated analogues: structure-activity relationships as revealed by NMR spectroscopy and MD calculations

The conformations of two synthetic pentapeptides with antimicrobial activity and their 4-fluorophenylalanine (Pff)-containing analogues (ArXArXAr-NH(2); Ar=Phe, Pff; X=Lys, Arg) have been studied. NMR experiments carried out both in aqueous fluoroalcohol solutions and SDS micelles permitted their interactions with membrane-like environments to be explored. WaterLOGSY experiments and Mn(2+)-based paramagnetic probes were also applied to assess their orientations with respect to the SDS micelles. In addition, pulse-field gradient (PFG) diffusion NMR spectroscopy studies were conducted, under different experimental conditions (i.e., concentration, temperature) to characterize the possible changes in the peptides' aggregation states as a putative critical factor for their antimicrobial activity. Finally, molecular dynamics simulations on a variety of conformations showed the intrinsic flexibility of these peptides in both aqueous solutions and membrane-mimetic systems.     

Mapping of a yeast G protein betagamma signaling interaction

The mating pathway of Saccharomyces cerevisiae is widely used as a model system for G protein-coupled receptor-mediated signal transduction. Following receptor activation by the binding of mating pheromones, G protein betagamma subunits transmit the signal to a MAP kinase cascade, which involves interaction of Gbeta (Ste4p) with the MAP kinase scaffold protein Ste5p. Here, we identify residues in Ste4p required for the interaction with Ste5p. These residues define a new signaling interface close to the Ste20p binding site within the Gbetagamma coiled-coil. Ste4p mutants defective in the Ste5p interaction interact efficiently with Gpa1p (Galpha) and Ste18p (Ggamma) but cannot function in signal transduction because cells expressing these mutants are sterile. Ste4 L65S is temperature-sensitive for its interaction with Ste5p, and also for signaling. We have identified a Ste5p mutant (L196A) that displays a synthetic interaction defect with Ste4 L65S, providing strong evidence that Ste4p and Ste5p interact directly in vivo through an interface that involves hydrophobic residues. The correlation between disruption of the Ste4p-Ste5p interaction and sterility confirms the importance of this interaction in signal transduction. Identification of the Gbetagamma coiled-coil in Ste5p binding may set a precedent for Gbetagamma-effector interactions in more complex organisms.