Genome-Wide Association Analysis and Genomic Prediction of Thyroglobulin Plasma Levels

Thyroglobulin (Tg) is an iodoglycoprotein produced by thyroid follicular cells which acts as an essential substrate for thyroid hormone synthesis. To date, only one genome-wide association study (GWAS) of plasma Tg levels has been performed by our research group. Utilizing recent advancements in computation and modeling, we apply a Bayesian approach to the probabilistic inference of the genetic architecture of Tg. We fitted a Bayesian sparse linear mixed model (BSLMM) and a frequentist linear mixed model (LMM) of 7,289,083 variants in 1096 healthy European-ancestry participants of the Croatian Biobank. Meta-analysis with two independent cohorts (total n = 2109) identified 83 genome-wide significant single nucleotide polymorphisms (SNPs) within the ST6GAL1 gene (p<5×10−8). BSLMM revealed additional association signals on chromosomes 1, 8, 10, and 14. For ST6GAL1 and the newly uncovered genes, we provide physiological and pathophysiological explanations of how their expression could be associated with variations in plasma Tg levels. We found that the SNP-heritability of Tg is 17% and that 52% of this variation is due to a small number of 16 variants that have a major effect on Tg levels. Our results suggest that the genetic architecture of plasma Tg is not polygenic, but influenced by a few genes with major effects.     

Brown trout as biomonitor of heavy metal pollution: effect of age on the reliability of the assessment

Brown trout (Salmo trutta L.) is a native fish of the rivers of northern Spain. It is the dominant fish species in these rivers, and it is widespread over all the range of freshwater ecosystems in the area, including ecosystems potentially polluted with heavy metals. In this study, the potential of brown trout as biomonitor of heavy metal pollution and the effect of fish age on the reliability of the assessment are analyzed. Copper, lead, and cadmium concentrations of both abiotic compartments (water and sediments) and brown trout (S. trutta) from three northern Spanish rivers were analyzed. Significant correlations were found between sediment lead content and lead concentration in trout liver. One-year-old juvenile trouts were demonstrated to be useful as a biomonitor of copper and lead pollution, revealing between-location differences. Older trouts do not seem adequate to properly monitor heavy metal pollution. The effect of aging on the reliability of this species as biomonitor is discussed.     

Prostaglandins suppress an outward potassium current in embryonic rat sensory neurons

One of the challenges in understanding ciliary and flagellar motility is determining the mechanisms that locally regulate dynein-driven microtubule sliding. Our recent studies demonstrated that microtubule sliding, in Chlamydomonas flagella, is regulated by phosphorylation. However, the regulatory proteins remain unknown. Here we identify the 138-kD intermediate chain of inner arm dynein I1 as the critical phosphoprotein required for regulation of motility. This conclusion is founded on the results of three different experimental approaches. First, genetic analysis and functional assays revealed that regulation of microtubule sliding, by phosphorylation, requires inner arm dynein I1. Second, in vitro phosphorylation indicated the 138-kD intermediate chain of I1 is the only phosphorylated subunit. Third, in vitro reconstitution demonstrated that phosphorylation and dephosphorylation of the 138-kD intermediate chain inhibits and restores wild-type microtubule sliding, respectively. We conclude that change in phosphorylation of the 138-kD intermediate chain of I1 regulates dynein-driven microtubule sliding. Moreover, based on these and other data, we predict that regulation of I1 activity is involved in modulation of flagellar waveform.     

Oscillatory behaviour during the oxidation of methane over palladium metal catalysts

Oscillatory reactions over palladium foil and wire catalysts during the oxidation of methane have been investigated over a wide range of reaction temperatures and argon/methane/oxygen feed gas compositions. Characterisation of the catalyst has also been carried out using scanning electron microscopy (SEM) techniques, which revealed the presence of a porous surface. This suggested that the metal surface has undergone a change since the reaction commenced, and using X-ray powder diffraction (XRD) techniques the palladium phase was shown to be the dominant phase present. Hysteresis phenomena were observed in the activity of the reaction as the temperature was cycled up and down, showing that the metal surface was continually changing throughout the reaction. The activation energies of the reaction during the high reactivity mode, PdO, and low reactivity mode, Pd, were also calculated. Oscillation rates were observed to depend on the dominant surface. Oscillations were frequent when the high reactivity mode was dominant while the activation energy of this mode was found to be low. When the low reactivity mode was dominant, the oscillations were slower and the activation energy was three times larger. The results obtained imply that the behaviour of the palladium surface, switching back and forth from the reduced state to the oxidised state, is responsible for the oscillatory behaviour seen in this system.     

Chemical Ecology of the host searching behavior in an Egg Parasitoid: are Common Chemical Cues exploited to locate hosts in Taxonomically Distant Plant Species?

Parasitoids are known to exploit volatile cues emitted by plants after herbivore attack to locate their hosts. Feeding and oviposition of a polyphagous herbivore can induce the emission of odor blends that differ among distant plant species, and parasitoids have evolved an incredible ability to discriminate them and locate their hosts relying on olfactive cues. We evaluated the host searching behavior of the egg parasitoid Cosmocomoidea annulicornis (Ogloblin) (Hymenoptera: Mymaridae) in response to odors emitted by two taxonomically distant host plants, citrus and Johnson grass, after infestation by the sharpshooter Tapajosa rubromarginata (Signoret) (Hemiptera: Cicadellidae), vector of Citrus Variegated Chlorosis. Olfactory response of female parasitoids toward plants with no herbivore damage and plants with feeding damage, oviposition damage, and parasitized eggs was tested in a Y-tube olfactometer. In addition, volatiles released by the two host plant species constitutively and under herbivore attack were characterized. Females of C. annulicornis were able to detect and significantly preferred plants with host eggs, irrespectively of plant species. However, wasps were unable to discriminate between plants with healthy eggs and those with eggs previously parasitized by conspecifics. Analysis of plant volatiles induced after sharpshooter attack showed only two common volatiles between the two plant species, indole and β-caryophyllene. Our results suggest that this parasitoid wasp uses common chemical cues released by many different plants after herbivory at long range and, once on the plant, other more specific chemical cues could trigger the final decision to oviposit.

     

Reprint of: Oxidative dehydrogenation of cyclohexane and cyclohexene over supported gold, –palladium catalysts

Supported gold, palladium and gold–palladium catalysts have been used to oxidatively dehydrogenate cyclohexane and cyclohexenes to their aromatic counterpart. The supported metal nanoparticles decreased the activation temperature of the dehydrogenation reaction. We found that the order of reactivity was Pd ≥ Au–Pd > Au supported on TiO₂. Attempts were made to lower the reaction temperature whilst retaining high selectivity. The space-time yield of benzene from cyclohexane at 473 K was determined to be 53.7 mol/kg_cat/h rising to 87.3 mol/kg_cat/h at 673 K for the Pd catalyst. Increasing the temperature in this case improved conversion at a detriment to the benzene selectivity. Oxidative dehydrogenation of cyclohexene over AuPd/TiO₂ or Pd/TiO₂ catalysts was found to be very effective (conversion >99% at 423 K). These results indicate that the first step in the reaction sequence of cyclohexane to cyclohexene is the slowest step. These initial results suggest that in a fixed-bed reactor the oxidative dehydrogenation in the presence of oxygen, palladium and gold–palladium catalysts are readily able to surpass current literature examples and with further modification should yield even higher performance.     

NONDESTRUCTIVE EXAMINATION OF EPOXY ADHESIVE-BONDED STRUCTURES EXPOSED TO A HUMID ENVIRONMENT: A COMPARISONOF LOW- AND HIGH-FREQUENCY DIELECTRIC MEASUREMENTS

Broadband dielectric measurements (10 -2 to 3 GHz) are reported on the effects of exposure of thick film adhesive-bonded structures to moisture. Measurement of the dielectric properties over a broad frequency range allows identification of water both in voids and as a molecular dispersion in the matrix. Changes in the low frequency region of the dielectric spectrum can be attributed to a combination of processes associated with plasticisation of the adhesive, interfacial polarisation effects, and hydration of the surface oxide layer. The data obtained are complemented by mechanical testing and failure analysis of the bond structure measured as a function of the time of exposure. This study indicates that for thick film adhesives the ageing characteristics are apparently independent of the surface treatment. In one of the joints studied an additional feature is identified which appears to correlate with the premature aging of the joint structure.     

Physicochemical,mineral and sensory properties of set‐type yoghurts produced by addition of grape,mulberry and carob molasses (Pekmez) at different ratios

This study investigated the effects of adding grape, mulberry and carob molasses (Pekmez) at 6%, 10% or 14% on titratable acidity, pH, viscosity, whey separation, water holding capacity (WHC), gel firmness, acetaldehyde, volatile fatty acids, colour values, mineral profile and sensory properties of set‐type yoghurts. Increasing concentration of the molasses decreased whiteness value, viscosity and WHC, but increased redness/greenness and yellowness/blueness values, whey separation and mineral contents of the samples significantly (P < 0.05). Nevertheless, the yoghurts produced by adding grape molasses had the highest points in the sensory evaluation, followed by mulberry and carob molasses.