Simultaneous automated design of structured QFT controller and prefilter using nonlinear programming

This paper describes a nonlinear programming‐based robust design methodology for controllers and prefilters of a predefined structure for the linear time‐invariant systems involved in the quantitative feedback theory. This controller and prefilter synthesis problem is formulated as a single optimization problem with a given performance optimization objective and constraints enforcing stability and various specifications usually enforced in the quantitative feedback theory. The focus is set on providing constraints expression that can be used in standard nonlinear programming solvers. The nonlinear solver then computes in a single‐step controller and prefilter design parameters that satisfy the prescribed constraints and maximizes the performance optimization objective. The effectiveness of the proposed approach is demonstrated through a variety of difficult design cases like resonant plants, open‐loop unstable plants, and plants with variation in the time delay. Copyright © 2016 John Wiley & Sons, Ltd.     

Active learning paradigms for CBIR systems based on optimum-path forest classification

This paper discusses methods for content-based image retrieval (CBIR) systems based on relevance feedback according to two active learning paradigms, named greedy and planned. In greedy methods, the system aims to return the most relevant images for a query at each iteration. In planned methods, the most informative images are returned during a few iterations and the most relevant ones are only presented afterward. In the past, we proposed a greedy approach based on optimum-path forest classification (OPF) and demonstrated its gain in effectiveness with respect to a planned method based on support-vector machines and another greedy approach based on multi-point query. In this work, we introduce a planned approach based on the OPF classifier and demonstrate its gain in effectiveness over all methods above using more image databases. In our tests, the most informative images are better obtained from images that are classified as relevant, which differs from the original definition. The results also indicate that both OPF-based methods require less user involvement (efficiency) to satisfy the user's expectation (effectiveness), and provide interactive response times.     

An integration experience of a software architecture and a monitoring infrastructure to deploy applications with non‐functional requirements in computing grids

Resource management is an important aspect to consider regarding applications that might have different non‐functional or operational requirements, when running in distributed and heterogeneous environments. In this context, it is necessary to provide the means to specify the required resource constraints and an infrastructure that can adapt the applications in light of the changes in resource availability. We adopted a contract‐based approach to describe and maintain parallel applications that have non‐functional requirements in a Computing Grid context, called ZeliGrid. To form the supporting infrastructure we have designed a software architecture that integrates some of the Globus services, the LDAP and the NWS monitoring services. Some modules that map the contract approach into software artifacts were also integrated to this architecture. This paper addresses the architecture and integration issues of our approach, as well as how we put the pieces together highlighting deployment and implementation details, which have to consider diverse aspects such as monitoring, security and dynamic reconfiguration. Copyright © 2010 John Wiley & Sons, Ltd.     

3D porosity prediction from seismic inversion and neural networks

In this work, we address the problem of transforming seismic reflection data into an intrinsic rock property model. Specifically, we present an application of a methodology that allows interpreters to obtain effective porosity 3D maps from post-stack 3D seismic amplitude data, using measured density and sonic well log data as constraints. In this methodology, a 3D acoustic impedance model is calculated from seismic reflection amplitudes by applying an L₁-norm sparse-spike inversion algorithm in the time domain, followed by a recursive inversion performed in the frequency domain. A 3D low-frequency impedance model is estimated by kriging interpolation of impedance values calculated from well log data. This low-frequency model is added to the inversion result which otherwise provides only a relative numerical scale. To convert acoustic impedance into a single reservoir property, a feed-forward Neural Network (NN) is trained, validated and tested using gamma-ray and acoustic impedance values observed at the well log positions as input and effective porosity values as target. The trained NN is then applied for the whole reservoir volume in order to obtain a 3D effective porosity model. While the particular conclusions drawn from the results obtained in this work cannot be generalized, such results suggest that this workflow can be applied successfully as an aid in reservoir characterization, especially when there is a strong non-linear relationship between effective porosity and acoustic impedance.     

A synergistic model-driven approach for persistence modeling with UML

The Model Driven Development (MDD) approach proposes that models (and model-to-model transformations) play the main role on system development. However, there is not a consensual notation to model persistence based upon object-relational mapping frameworks: while UML lacks specific resources for persistence modeling, the entity-relationship model does not make reference to the dynamic concepts existing in UML.This paper proposes MD-JPA, a UML profile for persistence modeling based on the well-known Java Persistence API 2 (JPA) standard for object-relational mapping, pursuing the modeling of transient and persistent elements in a more coherent and synergistic way. This paper describes the main characteristics of MD-JPA as well as the way that models that adopt such profile can them be used to generate a Java implementation by the application of the proposed model transformations on a MDD approach. Finally, an open source tool was developed to make the results of this work available to the community.     

WCET Analysis of Superscalar Processors Using Simulation With Coloured Petri Nets

Determining a tight WCET of a block of code to be executed on a modern superscalar processor architecture is becoming ever more difficult due to the dynamic behaviour exhibited by current processors, which include dynamic scheduling features such as speculative and out-of-order execution in the context of multiple execution units with deep pipelines. We describe the use of Coloured Petri Nets (CP-nets) in a simulation based approach to this problem. A complex model of a generic processor architecture is described, with emphasis on the modelling strategy for obtaining the WCET and an analysis of the results.     

Contribution of laser microdissection-based technology to proteomic analysis in hepatocellular carcinoma developing on cirrhosis

Hepatocellular carcinoma (HCC) is a major cause of cancer worldwide. Proteomic studies provide opportunities to uncover targets for the diagnosis and treatment of this disease. However, in HCC developing in a setting of cirrhosis, the detection of proteome alterations may be hampered by the increased cellular heterogeneity of tissue when analysing global liver homogenates. The aim of this study was to evaluate whether the identification of proteome alterations in these HCC cases was improved when the differential protein profile between tumour and non-tumour areas of liver was determined using hepatocytes isolated by laser microdissection (LM). Differential profiles established with LM-hepatocytes and liver section homogenates using 2-DE and MS exhibited noticeable differences: 30% of the protein spots with deregulated expression in tumorous LM-samples did not display any modification in homogenates; conversely 15% of proteins altered in tumorous homogenates were not impaired in LM-hepatocytes. These alterations resulted from the presence in cirrhotic liver of fibrotic stroma which displayed a protein pattern different from that determined in LM-hepatocytes. In conclusion, our data demonstrate the interest of LM in distinguishing between fibrotic and hepatocyte proteome alterations and thus the benefit of LM to proteome studies of HCC developing in a context of cirrhosis.     

Étude de la précision de l’estimation de la densité spectrale de puissance croisée,obtenue par transformation de fourier de la fonction de corrélation

The authors compare two different estimators of the crosscorrelation function and show that they give equivalent estimators in the frequency domain. They calculate the first and second order moments of the estimator of the cross-spectral-density (DSPC)due to the statistical errors and the quantification of inputs. From these general formulas, they perform numerical calculations for a particular case and they compare them to practical measurements. They show the interesting fact, that the variance of the statistical errors on the dspc is inferior by estimating its phase than by estimating its module. Furthermore, the quantification of the inputs may influence the variance of the phase of the DSPC estimated.     

FISH ASSEMBLAGES IN NON‐REGULATED AND REGULATED RIVERS FROM PERMANENT AND TEMPORARY IBERIAN SYSTEMS

The effects of river regulation on the hydrological cycle of a river and on the respective fish assemblage may differ according to dam operation purpose and type of river analysed. To assess the spatial and temporal variation of fish assemblages and their response to the hydrological changes caused by two different types of flow regulation, we selected three sampling sites in four rivers with different levels of regulation, two in a permanent river system and another two on a temporary one, which we sampled in four different annual seasons. In the permanent system, hydroelectrical regulation decreased hydrological variability, which affected fluvial specialist species, benefitting the generalist ones, and created a more homogeneous community that presented less intra‐annual variation. In the temporary system, agricultural regulation caused an inversion of the hydrological cycle, maintaining a moderate flow volume throughout the drought period that benefited the introduced, generalist and more tolerant species. Monthly volume was recognized, in a temporal scale, as the most important hydrological feature for assemblages’ structure, predicting the intra‐annual variation of several ecological guilds. This study provides important considerations for dam management and riverine ecosystems conservation. Copyright © 2012 John Wiley & Sons, Ltd.