Great Lakes rivermouth ecosystems: Scientific synthesis and management implications

At the interface of the Great Lakes and their tributary rivers lies the rivermouths, a class of aquatic ecosystem where lake and lotic processes mix and distinct features emerge. Many rivermouths are the focal point of both human interaction with the Great Lakes and human impacts to the lakes; many cities, ports, and beaches are located in rivermouth ecosystems, and these human pressures often degrade key ecological functions that rivermouths provide. Despite their ecological uniqueness and apparent economic importance, there has been relatively little research on these ecosystems as a class relative to studies on upstream rivers or the open-lake waters. Here we present a synthesis of current knowledge about ecosystem structure and function in Great Lakes rivermouths based on studies in both Laurentian rivermouths, coastal wetlands, and marine estuarine systems. A conceptual model is presented that establishes a common semantic framework for discussing the characteristic spatial features of rivermouths. This model then is used to conceptually link ecosystem structure and function to ecological services provided by rivermouths. This synthesis helps identify the critical gaps in understanding rivermouth ecology. Specifically, additional information is needed on how rivermouths collectively influence the Great Lakes ecosystem, how human alterations influence rivermouth functions, and how ecosystem services provided by rivermouths can be managed to benefit the surrounding socioeconomic networks.     

An introduction to compilation issues for parallel machines

The exploitation of today's high-performance computer systems requires the effective use of parallelism in many forms and at numerous levels. This survey article discusses program analysis and restructuring techniques that target parallel architectures. We first describe various categories of architectures that are oriented toward parallel computation models: vector architectures, shared-memory multiprocessors, massively parallel machines, message-passing architectures, VLIWs, and multithreaded architectures. We then describe a variety of optimization techniques that can be applied to sequential programs to effectively utilize the vector and parallel processing units. After an overview of basic dependence analysis, we present restructuring transformations on DO loops targeted both to vectorization and to concurrent execution, interprocedural and pointer analysis, task scheduling, instruction-level parallelization, and compiler-assisted data placement. We conclude that although tremendous advances have been made in dependence theory and in the development of a toolkit of transformations, parallel systems are used most effectively when the programmer interacts in the optimization process.     

Membranes,minerals, and proteins of developing vertebrate enamel

Developing tooth enamel is formed as organized mineral in a specialized protein matrix. In order to analyze patterns of enamel mineralization and enamel protein expression in species representative of the main extant vertebrate lineages, we investigated developing teeth in a chondrichthyan, the horn shark, a teleost, the guppy, a urodele amphibian, the Mexican axolotl, an anuran amphibian, the leopard frog, two lepidosauria, a gecko and an iguana, and two mammals, a marsupial, the South American short-tailed gray opossum, and the house mouse. Electron microscopic analysis documented the presence of a distinct basal lamina in all species investigated. Subsequent stages of enamel biomineralization featured highly organized long and parallel enamel crystals in mammals, lepidosaurians, the frog, and the shark, while amorphous mineral deposits and/or randomly oriented crystals were observed in the guppy and the axolotl. In situ hybridization using a full-length mouse probe for amelogenin mRNA resulted in amelogenin specific signals in mouse, opossum, gecko, frog, axolotl, and shark. Using immunohistochemistry, amelogenin and tuftelin enamel proteins were detected in the enamel organ of many species investigated, but tuftelin epitopes were also found in other tissues. The anti-M179 antibody, however, did not react with the guppy and axolotl enameloid matrix. We conclude that basic features of vertebrate enamel/enameloid formation such as the presence of enamel proteins or the mineral deposition along the dentin-enamel junction were highly conserved in vertebrates. There were also differences in terms of enamel protein distribution and mineral organization between the vertebrates lineages. Our findings indicated a correlation between the presence of amelogenins and the presence of long and parallel hydroxyapatite crystals in tetrapods and shark.     

Surface impedance studies on the electrodynamical response of organic superconductors

We have performed detailed measurements of the surface impedance in the normal and superconducting state of κ- (BEDT-TTF)₂Cu(NCS)₂in the millimeter wave frequency range (1 cm^{− 1} to 3 cm^{− 1}) and have evaluated the complex conductivity for different crystallographic orientations. Above the transition temperature, the material behaves like a metal with a scattering rate of approximately 20 cm^{− 1}. In the superconducting state the electrodynamics of both materials is in good agreement with calculations based on a BCS ground state: the penetration depth is temperature independent for T → 0; while the penetration depth and the coherence length are strongly anisotrop, the superconducting energy gap shows no indications of line nodes.     

Effects of dobutamine stress on myocardial blood flow, 99mTc sestamibi uptake, and systolic wall thickening in the presence of coronary artery stenoses: implications for dobutamine stress testing

BACKGROUND: Although dobutamine stress is used with both 99mTc sestamibi (sestamibi) myocardial perfusion imaging and echocardiography for detecting coronary artery stenoses, the impact of stenosis severity on test end points (myocardial sestamibi uptake and systolic thickening, respectively) has not been clearly defined. METHODS AND RESULTS: In 15 open-chest dogs, dobutamine (2.5 to 30 microg x kg(-1) x min(-1)) was infused after placement of an LAD stenosis that reduced (n=8) or abolished (n=7) flow reserve. In dogs with reduced flow reserve, the stenotic-to-normal sestamibi activity ratio (0.86+/-0.03) significantly underestimated the approximately 2-to-1 dobutamine-induced flow disparity at the time of sestamibi injection (flow ratio, 0.53+/-0.04; P<.001). Stenotic-zone thickening increased at low but not at higher doses of dobutamine (2.9+/-0.4 versus 4.2+/-0.4 mm in normal zone at peak dobutamine; P=.055) but did not fall below baseline (2.7+/-0.3 mm). Similarly, in dogs with absent flow reserve, the sestamibi activity ratio (0.78+/-0.02) underestimated the approximately 2.5-to-1 dobutamine-induced flow disparity (flow ratio, 0.41+/-0.05; P<.001), and failure to increase systolic thickening was observed in the stenotic zone (2.7+/-0.4 versus 4.6+/-0.3 mm in the normal zone at peak stress, P<.01). In both groups of dogs, myocardial sestamibi uptake and image defect magnitudes were less than expected for the dobutamine-induced hyperemia, suggesting that dobutamine adversely affects myocardial sestamibi binding. Finally, a significant reduction in stenotic-zone thickening was seen during postdobutamine recovery, consistent with myocardial stunning. CONCLUSIONS: In the presence of stenoses that reduced or abolished regional flow reserve, (1) myocardial sestamibi uptake significantly underestimated the dobutamine-induced flow heterogeneity, (2) a "failure to increase systolic thickening" rather than a reduction in thickening was observed during dobutamine stress, and (3) myocardial stunning was observed during postdobutamine recovery.     

Enhanced lipid peroxidation in patients positive for antiphospholipid antibodies

The mechanism leading to the formation of antiphospholipid antibodies (aPL) is still unknown. Because an in vitro study suggested that aPL may derive from pro-oxidant conditions, we sought a relationship between aPL and isoprostanes, indices of lipid peroxidation in vivo. Thirty patients with systemic lupus erythematosus have been studied. Seventeen (56.6%) were positive for aPL because they had lupus anticoagulant and/or high titer of anticardiolipin antibodies (aCL). Plasma levels of tumor necrosis factor (TNF ) and urinary excretion of two isoprostanes, 8-epi-PGF2alpha and IPF2alpha -I, free radical catalyzed oxidation products of arachidonic acid, were measured. Patients with systemic lupus erythematosus had higher urinary excretion of 8-epi-PGF2alpha and IPF2alpha -I than controls; urinary excretion of the two isoprostanes was highly correlated (Rho = 0.74, P < .0001). Urinary 8-epi-PGF2alpha was highly correlated with both aCL titer (Rho = 0. 70, P < .0001) and TNF (Rho = 0.84, P < .0001), a measure of disease severity. Excretion of this isoprostane was also higher in those patients who exhibited aPL (P < .0001). Comparable correlations were observed with the isoprostane IPF2alpha -I. No difference of 8-epi-PGF2alpha was observed between patients with and without previous history of thrombosis. This study, showing the existence of a close association between aPL and increased in vivo lipid peroxidation, supports the hypothesis that these antibodies may result from pro-oxidative conditions and suggests that inflammation may play an important role.     

Detection of "PNH red cell" populations in hematological disorders using the Sephacryl Gel Test micro typing system

Paroxysmal nocturnal hemoglobinuria (PNH) is an acquired clonal disorder characterised by an unusual sensitivity of abnormal red cell population(s) to complement lysis, due to a complete or incomplete defect of various surface molecules, including CD55 and CD59. PNH has been associated with various hematological disorders. Using a newly introduced method, the Sephacryl gel test microtyping system, we investigated the presence of CD55 or CD59 defective red cell populations in several hematological disorders. It was also found that a large proportion of such patients possess CD55 deficient populations, while a smaller but still significant proportion possess CD59 deficient populations. Defective red cell populations were detected in normal subjects as well. These findings need further investigation. Nevertheless the Sephacryl Gel Test microtyping system although non specific, seems to be useful in screening for the PNH and/or "PNH-like" red cell defect in several hematological disorders.     

Effects of Moderate and Extreme Flow Regulation on Populus Growth along the Green and Yampa Rivers,Colorado and Utah

River regulation induces immediate and chronic changes to floodplain ecosystems. We analysed both short‐term and prolonged effects of river regulation on the growth patterns of the keystone riparian tree species Fremont cottonwood (Populus deltoides ssp. wislizenii) at three upper Colorado River Basin rivers having different magnitudes of flow regulation. We compared cottonwood basal area increment on (i) the regulated Upper Green River below Flaming Gorge Dam; (ii) the adjacent free‐flowing Yampa River; and (iii) the partially regulated Lower Green River below their confluence. Our goal was to identify the hydrologic and climatic variables most influential to tree growth under different flow regimes. A dendrochronological analysis of 182 trees revealed a long‐term (37 years) trend of declining growth during the post‐dam period on the Upper Green, but trees on the partially regulated Lower Green maintained growth rates similar to those on the reference Yampa River. Mean annual, mean growing season, and peak annual discharges were the multicollinear flow variables most correlated to growth during both pre‐dam and post‐dam periods at all sites. Annual precipitation was also highly correlated with tree growth, but precipitation occurring during the growing season was poorly correlated with tree growth, even under full river regulation conditions. This indicates that cottonwoods rely primarily on groundwater recharged by river flows. Our results illustrate the complex and prolonged effects of flow regulation on floodplain forests, and suggest that flow regulation designed to simulate specific aspects of flow regimes, particularly peak flows, may promote the persistence of these ecosystems. Copyright © 2016 John Wiley & Sons, Ltd.