Cytological Observations and Bulked-Segregant Analysis Coupled Global Genome Sequencing Reveal Two Genes Associated with Pollen Fertility in Tetraploid Rice

Neo-tetraploid rice with high fertility is a useful germplasm for polyploid rice breeding, which was developed from the crossing of different autotetraploid rice lines. However, little information is available on the molecular mechanism underlying the fertility of neo-tetraploid rice. Here, two contrasting populations of tetraploid rice, including one with high fertility (hereafter referred to as JG) and another with low fertility (hereafter referred to as JD), were generated by crossing Huaduo 3 (H3), a high fertility neo-tetraploid rice that was developed by crossing Jackson-4x with 96025-4x, and Huajingxian74-4x (T452), a low fertility autotetraploid rice parent. Cytological, global genome sequencing-based bulked-segregant (BSA-seq) and CRISPR/Cas9 technology were employed to study the genes associated with pollen fertility in neo-tetraploid rice. The embryo sacs of JG and JD lines were normal; however, pollen fertility was low in JD, which led to scarce fertilization and low seed setting. Cytological observations displayed low pollen fertility (25.1%) and approximately 31.3 and 27.2% chromosome lagging at metaphase I and II, and 28.8 and 24.8% chromosome straggling at anaphase I and II in JD, respectively. BSA-seq of F_2–3 generations and RNA-seq of F₄ generation detected a common fragment, i.e., 18,915,234–19,500,000, at chromosome 7, which was comprised of 78 genes associated with fertility. Among 78 genes, 9 genes had been known to be involved in meiosis and pollen development. Two mutants ny1 (LOC_Os07g32406) and ny2 (LOC_Os07g32040) were generated by CRISPR/Cas9 knockout in neo-tetraploid rice, and which exhibited low pollen fertility and abnormal chromosome behavior. Our study revealed that two unknown genes, LOC_Os07g32406 (NY1) and LOC_Os07g32040 (NY2) play an important role in pollen development of neo-tetraploid rice and provides a new perspective about the genetic mechanisms of fertility in polyploid rice.     

High-precision analysis of a lateral shearing interferogram by use of the integration method and polynomials

Interferograms obtained with ordinary interferometers, such as the Fizeau interferometer or the Twyman-Green interferometer, show the contour maps of a wave front under test. On the other hand, lateral shearing interferograms show the difference between a wave front under test and a sheared wave front, that is, the inclination of the wave front. Therefore the shape of the wave front under test is reconstructed by means of analyzing the difference. To reconstruct the wave front, many methods have been proposed. An integration method is usually used to reconstruct the wave front under test rapidly. However, this method has two disadvantages: The analysis accuracy of the method is low, and part of the wave front cannot be measured. To overcome these two problems, a new, to our knowledge, integration method, improved by use of polynomials, is proposed. The validity of the proposed method is evaluated by computer simulations. In the simulations the analysis accuracy achieved by the proposed method is compared with the analysis accuracy of the ordinary integration method and that of the method proposed by Rimmer and Wyant. The results of the simulations show that the analysis accuracy of the newly proposed method is better than that of the integration method and that of the Rimmer-Wyant method.     

Control of viscous fingering and mixing in miscible displacements with time-dependent rates

In miscible displacements encountered in enhanced oil recovery processes, the unfavorable viscosity contrast between injected solvent and oil usually leads to viscous fingering (VF), a hydrodynamic instability which may result in a lower sweep efficiency and oil recovery. This phenomenon can be observed in a wide range of flows in subsurface porous media. This study examined a simple cyclic time-dependent displacement rate and its effects on the onset and longer development of VF. It is found that such varying displacement rate can either stabilize or destabilize VF, depending on the cycle period, amplitude, and displacement scenarios. The most important mechanism is that such time-dependent rate can effectively change the competition between convection (destabilizing effect) and dispersion (stabilizing effect). This is different from the widely used constant injection rate where the flow instability is actually determined by the Peclet number and mobility contrast for a given scenario. This study therefore provided a new aspect to control VF, either enhance or reduce, with low additional costs. It is therefore both scientifically and practically important for a wide range of flows in subsurface porous media. © 2017 American Institute of Chemical Engineers AIChE J, 65: 360–371, 2019     

Structural change in the Brill transition of Nylon m/n (1) Nylon 10/10 and its model compounds

Structural changes in the Brill transitions of Nylon 10/10 and its model compounds have been investigated by carrying out the temperature-dependent measurements of X-ray diffraction and infrared spectra along with the DSC measurement. The crystal structure at room temperature was found to be the so-called α form with the all-trans zigzag methylene segments. When the samples were heated, the infrared progression bands of the methylene segments, which are sensitive to the length of all-trans segmental parts, were found to change their spectral patterns in the transition temperature region: the progression bands decreased in intensity and disappeared above the transition region. At the same time several new bands were observed to appear, which were found to correspond to the progression bands of (CH₂)₇-(CH₂)₅trans-zigzag segments. These spectral changes indicate that the methylene segments were conformationally disordered by an invasion of some gauche bonds and as a result the effective length of trans-zigzag segments became shorter. This conformational disordering was found to occur more remarkably in the methylene segment of NH-(CH₂)₁₀-NH part than the CO-(CH₂)₈-CO part. At the same time the infrared bands of amide groups, in particular the bands sensitive to the twisting angles about the CH₂-amide bonds were found to show the remarkable change, indicating the local conformational change from planar-zigzag to twisted form in the CH₂-amide moiety. The frequency shift of amide A band (NH stretching mode) indicated a weakening of intermolecular hydrogen bonds, which however, did not disappear up to the melting region. From these data combined with the X-ray diffraction data, the structural disordering in the Brill transition phenomena was deduced concretely.     

Mechanistic-empirical pavement design guide (MEPDG): a bird’s-eye view

Past editions of the American Association of State Highway and Transportation Officials (AASHTO) Guide for Design of Pavement Structures have served well for several decades; nevertheless, many serious limitations exist for their continued use as the nation’s primary pavement design procedures. Researchers are now incorporating the latest advances in pavement design into the new Mechanistic-Empirical Pavement Design Guide (MEPDG), developed under the National Cooperative Highway Research Program (NCHRP) 1-37A project and adopted and published by AASHTO. The MEPDG procedure offers several dramatic improvements over the current pavement design guide and presents a new paradigm in the way pavement design is performed. However, MEPDG is substantially more complex than the AASHTO Design Guide by considering the input parameters that influence pavement performance, including traffic, climate, pavement structure and material properties, and applying the principles of engineering mechanics to predict critical pavement responses. It requires significantly more input from the designer. Some of the required data are either not tracked previously or are stored in locations not familiar to designers, and many data sets need to be preprocessed for use in the MEPDG. As a result, tremendous research work has been conducted and still more challenges need to be tackled both in federal and state levels for the full implementation of MEPDG. This paper, for the first time, provides a comprehensive bird’s eye view for the MEPDG procedure, including the evolvement of the design methodology, an overview of the design philosophy and its components, the research conducted during the development, improvement, and implementation phases, and the challenges remained and future developments directions. It is anticipated that the efforts in this paper aid in enhancing the mechanistic-empirical based pavement design for future continuous improvement to keep up with changes in trucking, materials, construction, design concepts, computers, and so on.

     

Use of a Metal-mould Process in the Development of Hemispherical Heavy-walled Castings

The exacting quality required of hemispherical heavy-walled steel castings, used in nuclear power applications, has been remarkably improved by the adoption of a newly developed metal-mould process. This technique is dependent on the use of a metal core. The optimum conditions for solidification were determined by the finite element analytical method. The appropriate wall-thickness of the chill elements was also investigated using data based on actual experience. The core was designed in such a manner that the surface carried a series of concave “dimples” in the manner of a golf-ball, the pattern being intended to prevent the formation of cracks, generated on the casting surface when in contact with a metal mould. Stresses caused by solidification shrinkage were reduced by splitting the core. In the event, the casting structure conformed well to the results of the solidification analysis. Radiographic examination revealed a high level of soundness, with no trace of internal defects. No anisotropy was detected in mechanical properties. It is shown that this process is being currently employed in the manufacture of actual products.     

Characterisation of gold kiwifruit pectin isolated by enzymatic treatment

Pectin was extracted from gold kiwifruit by four commercial enzyme preparations (Celluclast 1.5 L, Cytolase CL, Cellulyve TR 400 and NS33048). The chosen enzymes were used either in single or in combination, with and without protease addition. The recovered pectin was characterised and compared for the yield, total nonstarch polysaccharide and neutral sugar composition, protein and ash, pectin, molecular weight distribution and the viscosity. Results indicated that enzyme‐extracted gold kiwifruit pectin was rich in galacturonic acid. Purified pectin yield, and their physicochemical composition and rheological property (viscosity), was significantly affected by the type of enzyme used. The pectin extracted by Celluclast 1.5 L demonstrated to be the most viscous and recorded the highest in molecular weight (M_w) (1.65 × 10⁶ g mol^–1) compared with the other extracts. The extract M_w and their distribution were discussed and related to their viscosity behaviour.     

Ortho-deuterium Raman laser using the S0(2) rotationaltransition in the mid-infrared region

Based on a calculation for the Raman gain coefficient of the S₀(2) transition in ortho-D₂, we have demonstrated the generation of first Stokes waves in the 15-16-μm spectral region. Use of ortho-D enriched by a catalytic converter enabled us to realize efficient conversion at room temperature. Stokes energies as high as 400 mJ were obtained