Role of the Dictyostelium 30 kDa protein in actin bundle formation

We have studied the formation of bundles in mixtures of actin with the Dictyostelium 30 kDa actin-bundling protein as a function of 30 kDa protein concentration, actin concentration, and filament length. The presence of the 30 kDa protein promotes formation of filament bundles at actin concentrations and filament lengths that are not spontaneously aligned into liquid crystalline domains in the absence of the 30 kDa protein. Bundle formation in the presence of the 30 kDa protein was observed over a broad range of actin filament lengths and concentrations. Bundling was filament length dependent, and short filaments were more efficiently bundled. Bundles formed at actin concentrations as low as 2 microM. The volume fraction of the bundled portion and concentrations of actin and the 30 kDa protein in the bundled portion were measured using a sedimentation assay. Bundles have concentrations of actin and 30 kDa protein that are 10-20 and 5-20 times, respectively, greater than that of the bulk solution. Computer modeling reveals that bundling of actin by a bundling protein increases both the mean length and the polydispersity of the length distribution, factors which lower the actin concentration required for spontaneous alignment within the bundle. We propose that entropy-driven spontaneous ordering may contribute to bundle formation in two ways. Bundling of actin creates longer aggregates with a more polydisperse length distribution in which actin aligns spontaneously within the bundle at very low concentrations. In addition, bundling creates locally high concentrations of actin within these aggregates that will spontaneously align, providing an additional driving force for bundle ordering.     

Quantitative analysis of collaborative and mobility networks

This study proposes a quantitative analysis of researcher mobility (i.e. transfer from one institution to another) and collaborative networks on the basis of author background data extracted from biographical notes in scientific articles to identify connections that are not revealed via simple co-authorship analysis. Using a top-ranked journal in the field of computer vision, we create a layered network that describes various aspects of author backgrounds, demonstrating a geographical distribution of institutions. We classify networks according to various dimensions including authors, institutions and countries. The results of the quantitative analysis indicate that mobility networks extend beyond the typical collaborative networks describing institutional and international relationships. We also discuss sectoral collaboration considering the mobility networks. Our findings indicate a limitation of collaborative analysis based on bibliometric data and the importance of tracing researcher mobility within potential networks to identify the true nature of scientific collaboration.     

Stacking number dependence of size distribution of vertically stacked InAs/GaAs quantum dots

Vertically stacked layer structure is useful for controlling the size distribution of quantum dots. The dependence of the size distribution of quantum dots on the stacking numbers is theoretically and experimentally investigated. We show that the size distribution of quantum dots decreases with increasing the stacking number, and it occurs drastically when the stacking number is changed from 1 to 2. The quantitative analysis on in-plane strain energy distribution is also performed for the explanation.     

A redundant multivalued logic for a 10-Gb/s CMOS demultiplexer IC

A redundant multivalued logic is proposed for high-speed communication ICs. In this logic, serial binary data are received and converted into parallel redundant multivalued data. Then they are restored into parallel binary data. Because of the multivalued data conversion, this logic makes it possible to achieve higher operating speeds than that of a conventional binary logic. Using this logic, a 1:4 demultiplexer (DEMUX, serial-parallel converter) IC was fabricated using a 0.18-/spl mu/m CMOS process. The IC achieved an operating speed of 10 Gb/s with a supply voltage of only 1.3 V and with power consumption of 38 mW. This logic may achieve CMOS communication ICs with an operating speed several times greater than 10 Gb/s.     

Optical soliton transmission experiment in a comb-like dispersion profiled fiber loop

We discuss the properties of comb-like dispersion profiled fiber (CDPF) for an optical soliton transmission. It is found that the CDPF in which the standard single-mode fiber is placed both at the first and at the end of each section is more suitable to reduce dispersive waves if chirp-free transform limited optical pulse is used as a light source. A 10-ps optical soliton transmission experiment is performed in such a CDPF over 1000 km with the amplifier spacing of 80 km that corresponds to 3.1 times the dispersion distance.     

Control scheme for optimizing the interferometer phase bias in a symmetric-Mach-Zehnder-type all-optical switch

A control scheme for accurately optimizing (and also automatically stabilizing) the interferometer phase bias of symmetric-Mach-Zehnder (SMZ)-type ultrafast all-optical switches is proposed. In this control scheme, weak continuous-wave light is used as supervisory input light and its spectral power ratio at the switch output is used as a bipolar error signal. Our experimental results for 168-Gb/s 16:1 demultiplexing with a hybrid-integrated SMZ switch indicate the feasibility and the sensitivity of this control scheme.     

Properties of the peptides liberated from rice protein in sokujo-moto

In the supernatant of sokujo-moto, a high level of acid carboxypeptidase (ACP) activity and a large amount of peptides were observed, however, the amount of free amino acids liberated was small. In order to determine why these peptides were not hydrolyzed to any significant degree by the ACP, the properties of the peptides in sokujo-moto were investigated in this study. Peptides were fractionated from sokujo-moto by ion exchange column chromatography. ACP purified from rice-koji (rice overgrown with Aspergillus oryzae) was allowed to react with the peptides, and it was found that they were not hydrolyzed to any significant degree by the enzyme. Gel filtration chromatography was performed to ascertain the molecular size distribution of the peptides in sokujo-moto, and it was revealed that they were of low molecular sizes; molecular size: mainly in the range of 200-400, and chain length: 2-3. ACP purified from rice-koji was also allowed to react with various synthetic peptides, and it was found that ACP of rice-koji could not rapidly hydrolyze low-molecular-size peptides, such as dipeptides or tripeptides. Acid protease (AP) purified from rice-koji released peptides of molecular sizes mainly in the range of 300-600 or above from rice protein under acidic conditions (pH 3.6; the pH of sokujomoto). When AP and ACP were allowed to act at the same time on rice protein, mainly low-molecular-size peptides (molecular sizes mainly in the range of 200-400) were produced. From these results, it was estimated that AP released peptides with molecular sizes mainly in the range of 300-600 or above from rice protein and ACP degraded the relatively higher molecular size peptides among them to lower molecular size peptides; consequently only low-molecular-size peptides with molecular sizes mainly in the range of 200-400 were released in the supernatant of sokujo-moto.     

Demonstration of 100 Gbps optical packet switching using header processor based on 48-bit longest prefix matching

Wire-rate packet processing and its energy saving for over 100 Gbps speed of line are major issues to be resolved in optical packet switching (OPS) networks. For that purpose, we newly develop a high-speed, deterministic-latency electronic header processor based on longest prefix matching (LPM) for searching optical packet destination addresses (OP-DAs). This paper reports the successful experimental results of electronic header processing based on LPM search of up to 48 bits and optical switching of 100 Gbps optical packets by the use of the header processor. We demonstrate 48-bit LPM-capable optical packet switching. We also demonstrate IP packet transfer and 32-bit LPM-capable optical packet switching. In the latter demonstration, the 32-bit OP-DA of optical packets is directly copied from the 32-bit destination address of Internet Protocol version 4 (IPv4) packets. This result indicates that OPS networks can be deployed with electronic IP networks by the use of integrated network operation between OPS and IP networks.     

A novel GaAs power MESFET with low distortion characteristicsemploying semi-insulating setback layer under the gate

A low distortion GaAs power MESFET has been developed by employing a semi-insulating setback layer under the gate. The setback region was obtained by diffusing chromium from the Cr/Pt/Au gate metal in self-aligned manner. The novel power FET with the setback layer was found to be insensitive to surface trapping effects. They showed only 5-6 percent frequency dispersion of drain current at 1 MHz compared to DC condition. Because of this small frequency dispersion, the typical measurement FET, which has a surface setback layer, with a gate width of 36 mm exhibited 1.5 dB larger output power at 1 dB gain compression point than that of the FET without the setback layer. Moreover, in the π/4 shift-QPSK modulation that has been most popular in digital mobile communication system, the FET exhibited 11 dB smaller adjacent channel leakage power than the conventional one at the output power of 31.5 dBm