A “four-ferrocene” modified stem-loop structure as a probe for sensitive detection and single-base mismatch discrimination of DNA

We report the use of a four-ferrocene modified oligonucleotide as a probe for DNA detection with a gold electrode microsystem. This oligonucleotide is synthesized by automated solid-phase synthesis with four successive ferrocene moieties at the 5′-end and a C6-thiol modifier group at the 3′-end. The grafting of this 4Fc-DNA probe on a gold electrode microsystem results in the appearance of the ferrocene redox couple in cyclic voltammetry. The probe sequence is a stem-loop structure that folds efficiently on the electrode, thus optimizing electron transfer. Such architecture serves as sensor for DNA detection which is based on hybridization. The resulting disposable voltammetric sensor allowed direct, reagentless DNA detection in a small volume (20 μL). Electrochemical response upon hybridization with complementary short sequence (30-base length) and long sequence (50-base length) strands was observed by differential pulse voltammetry. Current variations were compared. The longer the sequence, the greater the decrease in current. The system's detection limit was estimated at 3.5 pM (0.07 fmol in 20 μL) with the 50-base length target and provided a dynamic detection range between 3.5 pM and 5 nM. Single mismatch detection showed a good level of sensitivity. The system was regenerated twice with no significant loss of Fc signal. Finally, 1 pM sensitivity was reached with a long chain analog of DNA PCR products of Influenza virus.     

Shock-Wave Attenuation and Energy-Dissipation Potential of Granular Materials

The propagation of uniaxial-stress planar shocks in granular materials is analyzed using a conventional shock-physics approach. Within this approach, both compression shocks and decompression waves are treated as (stress, specific volume, particle velocity, mass-based internal energy density, temperature, and mass-based entropy density) propagating discontinuities. In addition, the granular material is considered as being a continuum (i.e., no mesoscale features like grains, voids, and their agglomerates are considered). However, while the granular material is treated as a (smeared-out) continuum, it is recognized that it contains a solid constituent (parent matter), and that the structurodynamic properties (i.e., Equations of State (EOS) and Hugoniot relations) of the granular material are related to its parent matter. Three characteristic shock loading regimes of granular material are considered and, in each case, an analysis is carried out to elucidate shock attenuation and energy dissipation processes. In addition, an attempt is made to identify a metric (a combination of the material parameters) which quantifies the intrinsic ability of a granular material to attenuate a shock and dissipate the energy carried by the shock. Toward that end, the response of a typical granular material to a flat-topped compressive stress pulse is analyzed in each of the three shock loading regimes.     

Meso-scale Computational Investigation of Shock-Wave Attenuation by Trailing Release Wave in Different Grades of Polyurea

Over the past several years, considerable research efforts have been made toward investigating polyurea, a segmented thermoplastic elastomer, and particularly its shock-mitigation capacity, i.e., an ability to attenuate and disperse shock-waves. These research efforts have clearly established that the shock-mitigation capacity of polyurea is closely related to its chemistry, processing route, and the resulting microstructure. Polyurea typically possesses a nano-segregated microstructure consisting of (high glass transition temperature, T _g) hydrogen-bonded discrete hard domains and a (low T _g) contiguous soft matrix. While the effect of polyurea microstructure on its shock-mitigation capacity is well-established, it is not presently clear what microstructure-dependent phenomena and processes control its shock-mitigation capacity. To help identify these phenomena and processes, meso-scale simulations of the formation of nano-segregated microstructure and its interaction with a leading shock-wave and a trailing release-wave is analyzed in the present work. The results obtained revealed that shock-induced hard-domain densification makes an important contribution to the superior shock-mitigation capacity of polyurea, and that the extent of densification is a sensitive function of the polyurea soft-segment molecular weight. In particular, the ability of release-waves to capture and neutralize shock-waves has been found to depend strongly on the extent of shock-induced hard-domain densification and, thus, on the polyurea soft-segment molecular weight.     

Factors affecting farmers’ willingness and ability to adopt and retain vitamin A-rich varieties of orange-fleshed sweet potato in Mozambique

The addition of orange-fleshed sweet potato (OFSP) to the food environment is an effective nutrition-sensitive agricultural approach to improve vitamin A intakes. However, the adoption of this biofortified crop merits further study. The objective of our research was to understand factors that affect Mozambican farmers’ adoption and retention of OFSP varieties, with a specific interest in the retention of planting material. Field research was conducted in three provinces of Mozambique during 2015. Provinces with different OFSP intervention histories were selected to allow for the identification of site-specific factors and the impact of variable approaches over time. Qualitative inquiry was used to assess participants’ progress through the five stages of the Innovation-Decision process in the Diffusion of Innovations Theory. Ninety-five producers, consumers, and market stakeholders of OFSP participated in semi-structured in-depth interviews and focus groups. Results indicate that diverse factors influenced the adoption and retention of OFSP, including organoleptic qualities, taste preferences, access to planting material, agronomic traits, environmental conditions, lack of capital for inputs and labor, unstable markets, and limited sharing of information and planting material across farmer networks. Current OFSP varieties were acceptable to Mozambican farmers and consumers, but there are several remaining challenges to reaching a critical mass such as lack of access to planting material, perceptions of superior drought tolerance of white-fleshed sweet potato (WFSP), and the belief that OFSP requires additional effort to cultivate (e.g. weed removal, measuring space between plants). Key recommendations which may be considered in future planning for OFSP interventions in Mozambique and other countries include enabling decentralized vine multipliers to provide vines to community members at no cost, continued focus on breeding and distribution of more drought tolerant varieties of OFSP, and training on the similarities in agronomic practices required for producing and preserving OFSP and WFSP.     

Process Modeling of Ti-6Al-4V Linear Friction Welding (LFW)

A fully coupled thermomechanical finite-element analysis of the linear friction welding (LFW) process is combined with the basic physical metallurgy of Ti-6Al-4V to predict microstructure and mechanical properties within the LFW joints (as a function of the LFW process parameters). A close examination of the experimental results reported in the open literature revealed that the weld region consists of a thermomechanically affected zone (TMAZ) and a heat-affected zone (HAZ) and that the material mechanical properties are somewhat more inferior in the HAZ. Taking this observation into account, a model for microstructure-evolution during LFW was developed and parameterized for the Ti-6Al-4V material residing in the HAZ. Specifically, this model addresses the problem of temporal evolution of the prior ??-phase grain size (the dominant microstructural parameter in the HAZ) during the LFW process. This model is next combined with the well-established property versus microstructure correlations in Ti-6Al-4V to predict the overall structural performance of the LFW joint. The results obtained are found to be in reasonably good agreement with their experimental counterparts suggesting that the present computational approach may be used to guide the selection of the LFW process parameters to optimize the structural performance of the LFW joints.     

NMR and molecular modelling studies on elastase inhibitor-peptides for wound management

Proteases play an important and critical role in the physiological process of wound repair. However, excessive and unregulated release of proteolytic enzymes (e.g., elastase) mediates abnormal degradation of healthy tissues, which leads to inflammatory disorders such as chronic wounds. Thus, it is of therapeutic interest to develop novel synthetic inhibitor-peptides of elastase, which can restore the balance between the free enzyme and the endogenous inhibitors in chronic wounds. In previous works, we have reported two different drug delivery systems to release novel elastase inhibitors to the wound site. In both systems synthetic peptides (KRCCPDTCGIKCL-Pep4 and KRMMPDTMGIKML-Pep4M) based on the primary structure of the endogenous elastase inhibitor, secretory leucocyte protease inhibitor, were used as active material. Phosphorylation of the reported peptides prompts significant structural differences, which reflects in distinct inhibitory capacity towards elastase. These structural modifications were prompted by electrostatic interactions and hydrogen bonds established from the peptide phosphoresidue. The current study was also extended to another synthetic peptide (WCTASVPPQCY-PepBBI) that is based on the reactive loop of another elastase inhibitor, the Bowmen-Birk inhibitor. PepBBI, phosphorylated and non-phosphorylated, displays similar behaviour to Pep4 and Pep4M. The structural modifications reported herein were evaluated by two-dimensional nuclear magnetic resonance and molecular modelling approaches.     

Material Constitutive Models for Creep and Rupture of SiC/SiC Ceramic-Matrix Composites (CMCs) Under Multiaxial Loading

Material constitutive models for creep deformation and creep rupture of the SiC/SiC ceramic-matrix composites (CMCs) under general three-dimensional stress states have been developed and parameterized using one set of available experimental data for the effect of stress magnitude and temperature on the time-dependent creep deformation and rupture. To validate the models developed, another set of available experimental data was utilized for each model. The models were subsequently implemented in a user-material subroutine and coupled with a commercial finite element package in order to enable computational analysis of the performance and durability of CMC components used in high-temperature high-stress applications, such as those encountered in gas-turbine engines. In the last portion of the work, the problem of creep-controlled contact of a gas-turbine engine blade with the shroud is investigated computationally. It is assumed that the blade is made of the SiC/SiC CMC, and that the creep behavior of this material can be accounted for using the material constitutive models developed in the present work. The results clearly show that the blade-tip/shroud clearance decreases and ultimately becomes zero (the condition which must be avoided) as a function of time. In addition, the analysis revealed that if the blade is trimmed at its tip to enable additional creep deformation before blade-tip/shroud contact, creep-rupture conditions can develop in the region of the blade adjacent to its attachment to the high-rotational-speed hub.     

Collaborative planning and situation awareness in Army command and control

We conducted a theoretical investigation of a complex command and control (C2) operation--the manoeuvres planning processes in Army land-battle situations, to improve understanding of how technology can best be designed to support planning and course of action development. We drew upon results from cognitive task analyses and interviews with subject matter experts and insights gleaned from observations of Army training exercises and experiments to make inferences on the C2 activities carried out in preparation for tactical manoeuvres. In this paper, we summarize several critical human factors issues associated with planning in a rapidly evolving environment, as identified in our investigation, and describe system design concepts aimed at addressing these challenges to distributed collaborative planning of C2 activities. We conclude with implications for the application of these findings to other C2 domains.     

External Linkages, R&D and Innovation Performance in US Business Services

This paper examines the innovation performance of 206 US business services firms. Results suggest that external linkages, particularly with customers, suppliers and strategic alliances, significantly enhance innovation performance in terms of the introduction of new services. A highly qualified workforce increases the probability of service and organizational innovation, and increases the extent of a firm's innovation, but unqualified employees also play an important role. Contrasting with some earlier research on services, the presence of formal and informal R&D significantly increases the extent of new-to-market and new-to-firm innovation.