Visualizing Underwater Ocean Optics

Simulating the in‐water ocean light field is a daunting task. Ocean waters are one of the richest participating media, where light interacts not only with water molecules, but with suspended particles and organic matter as well. The concentration of each constituent greatly affects these interactions, resulting in very different hues. Inelastic scattering events such as fluorescence or Raman scattering imply energy transfers that are usually neglected in the simulations. Our contributions in this paper are a bio‐optical model of ocean waters suitable for computer graphics simulations, along with an improved method to obtain an accurate solution of the in‐water light field based on radiative transfer theory. The method provides a link between the inherent optical properties that define the medium and its apparent optical properties, which describe how it looks. The bio‐optical model of the ocean uses published data from oceanography studies. For inelastic scattering we compute all frequency changes at higher and lower energy values, based on the spectral quantum efficiency function of the medium. The results shown prove the usability of the system as a predictive rendering algorithm. Areas of application for this research span from underwater imagery to remote sensing; the resolution method is general enough to be usable in any type of participating medium simulation.     

A holistic approach to collaborative ontology development based on change management

This paper describes our methodological and technological approach for collaborative ontology development in inter-organizational settings. It is based on the formalization of the collaborative ontology development process by means of an explicit editorial workflow, which coordinates proposals for changes among ontology editors in a flexible manner. This approach is supported by new models, methods and strategies for ontology change management in distributed environments: we propose a new form of ontology change representation, organized in layers so as to provide as much independence as possible from the underlying ontology languages, together with methods and strategies for their manipulation, version management, capture, storage and maintenance, some of which are based on existing proposals in the state of the art. Moreover, we propose a set of change propagation strategies that allow keeping distributed copies of the same ontology synchronized. Finally, we illustrate and evaluate our approach with a test case in the fishery domain from the United Nations Food and Agriculture Organisation (FAO). The preliminary results obtained from our evaluation suggest positive indication on the practical value and usability of the work here presented.     

Biocoatings: challenges to expanding the functionality of waterborne latex coatings by incorporating concentrated living microorganisms

Biocoatings concentrate living, nongrowing microbes in nanoporous adhesive polymer films. Any microbial activity or trait of interest can be intensified and stabilized in biocoatings. These films will dramatically expand the functionality of waterborne coatings. Many microbes contain enzyme systems which are unstable when purified. Therefore, thin polymer coatings of active microbes are a revolutionary approach to stabilize living cells as industrial or environmental biocatalysts. We have demonstrated that some microbes survive polymer film formation embedded in nontoxic adhesive waterborne binders by controlling formulation and drying. Biocoatings can be a single layer of randomly oriented microbes or highly structured multilayer films combining monolayers of different types of microbes on solid, porous, or flexible substrates. They can be formed by drawdown or ink-jet deposition, convective sedimentation assembly, dielectrophoresis, or coated onto or embedded within papers. Controlled drying generates nanoporous microstructure; the pores are filled with a carbohydrate glass which stabilizes the entrapped dehydrated microbes. When the coating is rehydrated, the carbohydrates diffuse out generating nanopores. The activity of biocoatings can be 100s of g L^?1 (coating volume) h^?1 stabilized for 100–1000s of hours, and therefore, they represent a new approach to process intensification (PI) using thin liquid film bioreactors. A current challenge is that many microbes being engineered as environmental, solar, or carbon recycling biocatalysts do not naturally survive film formation. The mechanisms of dehydration damage that occur during biocoating formulation, ambient drying, and during dry storage have begun to be studied. Critical to preserving microbe viability are minimizing osmotic stress, toxic monomers, biocides, and utilizing polymer chemistries that generate strong wet adhesion with arrested coalescence (nanoporosity). Therefore, controlling desiccation, drying rate/uniformity, and residual moisture are important. Optimization of biocoating activity can be affected at multiple stages—cellular engineering prior to coating (preadaptation), formulation, deposition (film thickness), film formation/drying (generates microstructure), dry storage (minimize metabolic activity), and rehydration. Gene induction (activation) leading to enzyme synthesis following rehydration has been demonstrated. However, little is known about gene regulation in nongrowing microbes. Challenges to optimizing biocoating activity include generating stable film porosity, strong wet adhesion, control of residual water content/form/distribution, and nondestructive measurement of entrapped microbe viability and activity. Indirect methods to measure viability include vital staining, enzyme activity, reporter genes, response to light, confocal fluorescent microscopy, and ATP content. Microbes containing stress-inducible reporter genes can be used to monitor cell stress during formulation, film formation, and drying. Future cellular engineering to optimize biocoatings includes desiccation tolerance, light reactivity (photoefficiency), response to oxidative stress, and cell surface-to-polymer or substrate adhesion. Preservation of microbial activity in waterborne coatings could lead to high intensity biocatalysts for environmental cleaning, gaseous carbon recycling, to produce H₂ or electricity from microbial fuel cells, delivery of probiotics, or for biosolar energy harvesting.     

Novel hydrogels based on itaconic acid and citraconic acid: Synthesis,metal ion binding,and swelling behavior

Several copolymer hydrogels were prepared from radical copolymerization of 2‐hydroxypropyl methacrylate (HPMA) with itaconic acid (IA) and also with citraconic acid (CA) by using different feed ratios. The copolymers were characterized by FTIR, ¹H‐NMR, and ¹³C‐NMR spectroscopy as well as by thermal analysis. The swelling process of the different hydrogels immersed in water at different pH has been studied, and also the swelling of the hydrogels loaded with metal ions (Pb²⁺, Cd²⁺) was investigated. The metal‐binding properties were studied by using the liquid‐phase polymer‐based retention technique, including studies on the influence of pH on the binding process. The efficiency of these hydrogels for the recovery of metal ions in solution was determined by atomic absorption spectroscopic analysis. The thermal characteristics of these copolymers were studied by using differential scanning calorimetry and thermogravimetric analysis in nitrogen atmosphere. Accordingly, the gels loaded with metal ions showed a slight increase of the thermal decomposition temperature when compared with the pristine gels. The copolymer gel HPMA‐co‐CA showed a single glass transition temperature, whereas for the copolymer systems, HPMA‐co‐IA, only the copolymers loaded with Cd²⁺ ions showed a glass transition temperature. The morphology of film produced from the copolymers was investigated by scanning electron microscopy, revealing generally smooth surfaces. © 2009 Wiley Periodicals, Inc. J Appl Polym Sci, 2009     

Aromatization of Methane Over Mo-Fe/ZSM-5 Catalysts

Two groups of samples were studied for the aromatization of methane over Mo-Fe/ZSM-5 catalysts. The first group contains fixed loading (5 wt%) and variable Mo/Fe ratio. The second group was prepared with fixed Mo/Fe ratio and variable loading. The samples were characterized by TGA, S _BET, XRD, NH₃-TPD and TPO analysis. NH₃-TPD results indicate that the strength of strong acid sites increases when Mo/Fe ratio decreases for samples with fixed loading. The amount of strong sites decreases and new intermediate acid sites appear on samples containing both Mo and Fe. XRD results show the presence of iron molybdate for samples impregnated with both Mo and Fe. The catalytic properties of these samples were related not only to the amount and strength of acid sites but also to the iron molybdate phase.     

Proton-conducting membranes from phosphotungstic acid-doped sulfonated polyimide for direct methanol fuel cell applications

A series of novel hybrid proton conducting membranes based on sulfonated naphthalimides and phosphotungstic acid (PTA) were prepared from N-Methyl Pyrrolidone (NMP) solutions. These hybrid organic-inorganic materials, composed of two proton-conducting components, have high ionic conductivities (9.3 × 10^?2 S cm^?1 at 60 °C, 15% PTA), and show good performance in H₂|O₂ polymer electrolyte membrane fuel cells (PEMFC), previously reported by us. Moreover, they have low methanol permeability compared to Nafion^®112. In this paper we describe, for the first time, the behaviour of these hybrid membranes as electrolyte in a direct methanol fuel cell (DMFC). The maximum power densities achieved with PTA doped sulfonated naphthalimide membrane, operating with oxygen and air, were 34.0 and 12.2 mW cm^?2, respectively; about the double and triple higher than those showed by the non-doped membrane at 60 °C.     

Characterization of functional residues in the interfacial recognition domain of lecithin cholesterol acyltransferase (LCAT)

Lecithin cholesterol acyltransferase (LCAT) is an interfacialenzyme active on both high-density (HDL) and low-density lipoproteins(LDL). Threading alignments of LCAT with lipases suggest thatresidues 50–74 form an interfacial recognition site andthis hypothesis was tested by site-directed mutagenesis. The(56–68) deletion mutant had no activity on any substrate.Substitution of W61 with F, Y, L or G suggested that an aromaticresidue is required for full enzymatic activity. The activityof the W61F and W61Y mutants was retained on HDL but decreasedon LDL, possibly owing to impaired accessibility to the LDLlipid substrate. The decreased activity of the single R52A andK53A mutants on HDL and LDL and the severer effect of the doublemutation suggested that these conserved residues contributeto the folding of the LCAT lid. The membrane-destabilizing propertiesof the LCAT 56–68 helical segment were demonstrated usingthe corresponding synthetic peptide. An M65N–N66M substitutiondecreased both the fusogenic properties of the peptide and theactivity of the mutant enzyme on all substrates. These resultssuggest that the putative interfacial recognition domain ofLCAT plays an important role in regulating the interaction ofthe enzyme with its organized lipoprotein substrates.     

Crystallography and the liquid crystal phase: a new approach to structural studies on a thermo-tropic smectic Schiff base

In spite of the apparent contradiction between ‘liquid crystals’ (LC, materials exhibiting some degree of disorder) and ‘crystallography’ (a paradigmatic ordered kingdom), X-ray diffraction (XRD) studies make a substantial contribution to the field of LC. Focusing this review on smectic (Sm, lamellar) LC, we first describe how extremely careful XRD studies performed on mono-domain samples in the LC phase helped to elucidate the molecular structure of ordered Sm phases. Then, we describe selected examples in which single-crystal (SC) XRD on the solid-state phase of the mesogens provided information about their supra-molecular organization in the Sm phase. Finally, we present a different approach to this problem in the case of a thermo-tropic Schiff base (SB) which undergoes crystal???LC???isotropic liquid phase transformations. By combined SC and variable-temperature powder XRD, we show that the SB LC is a hexatic smectic B phase that derives from the crystal phase by relatively small topological changes promoted by the set-in of thermal rotational disorder around the long SB molecular axis.     

Microwave‐Assisted Synthesis of N‐Heterocyclic Carbene‐ Palladium(II) Complexes

The microwave‐assisted synthesis of two different types of N‐heterocyclic carbene‐palladium(II) complexes, (NHC)Pd(acac)Cl (NHC=N‐heterocyclic carbene; acac=acetylacetonate) and (NHC)PdCl₂(3‐chloropyridine), has been carried out. A drastic reduction in reaction times (20 to 88 times faster, depending on the complex) was observed when compared to the previously described, conventionally‐heated synthesis of these complexes. The protocol also allowed for the synthesis of (IPr)Pd(acac)Cl [IPr=1,3‐bis(2,6‐diisopropylphenyl)imidazol‐2‐ylidene] on a 5‐mmol scale in 30 min, with the reactants loaded in air.