Chloramphenicol antibody causing interference in antibody detection and identification tests

Investigation of the serum of three patients with positive antibody detection tests demonstrated the cause in each to be an antibody against chloramphenicol, a bacteriostatic agent used in commercial red blood cell reagents. Washing of these red cells prior to use prevented agglutination. All three examples of anti-chloramphenicol antibody were IgM and were in low titer when tested at room temperature and 37 C in saline. Two of the antibodies bound complement. The possibility of an antibody to an ingredient of the commercial preservative solution should be considered if problems are encountered in tests with unwashed commercial red blood cell reagents.     

Putting the poorest farmers in control of disseminating improved wheat seed: a strategy to accelerate technology adoption and alleviate poverty in Bangladesh

This paper reports on a ‘bottom-up’ system of wheat seed technology transfer that was piloted in north–west Bangladesh with 45 mainly marginal (food insecure) farming families during the 2004–2005 wheat season, then scaled out to a further 545 mainly marginal, farming families during the 2006–2007 season. The system was devised following a survey which indicated that such farmers can obtain a 52% increase in wheat grain yield and extra income by switching from the old Kanchan variety to the newer, heat and disease-tolerant Shatabdi variety. The bottom-up wheat seed dissemination system involved the creation of an enabling environment which allowed poor and ultra-poor farmers to store and sell selected seed of recently-released wheat varieties that they produced in 20 decimal (0.08 ha) plots. During the pilot phase of the project in 2005, farmers produced 7, 976 kg of grain and more than 50% of this was selected as high quality seed, stored during the monsoon season and marketed to other farmers just prior to the following wheat season. This seed was sold at Tk25–30/kg and realised profits averaging Tk3,002 (€38.49; exchange rate was 78:1 in October 2005) per household. In 2007, the seed price had risen to Tk33–50/kg and a larger group of farmers produced, stored and marketed 168,800 kg of high quality wheat seed, which realised profits averaging Tk5,080, equivalent to €51 (exchange rate was 99.6:1 in October 2007), per household. This bottom up seed production and dissemination system met the wheat seed requirements of more than 1,400 neighbouring farmers in areas with a deficit of wheat seed for planting, and enabled poor and ultra-poor farmers to earn more than 50% of the income they needed to cross the local poverty line.

Hydroxyl radical formation upon oxidation of reduced humic acids by oxygen in the dark

Humic acids (HAs) accept and donate electrons in many biogeochemical redox reactions at oxic/anoxic interfaces. The products of oxidation of reduced HAs by O(2) are unknown but are expected to yield reactive oxygen species, potentially including hydroxyl radical (·OH). To quantify the formation of ·OH upon oxidation of reduced HAs by O(2), three HAs were reduced electrochemically to well-defined redox states and were subsequently oxidized by O(2) in the presence of the ·OH probe terephthalate. The formation of ·OH upon oxidation increased with increasing extent of HA reduction. The yield of ·OH ranged from 42 to 160 mmol per mole of electrons donated by the reduced HA. The intermediacy of hydrogen peroxide (H(2)O(2)) in the formation of ·OH was supported by enhancement of ·OH formation upon addition of exogenous H(2)O(2) sources and by the suppression of ·OH formation upon addition of catalase as a quencher of endogenous H(2)O(2). The formation of ·OH in the dark during oxidation of reduced HA represents a previously unknown source of ·OH formation at oxic/anoxic interfaces and may affect the biogeochemical and pollutant redox dynamics at these interfaces.     

Resolving the origin of the petrogenic hydrocarbon background in Prince William Sound, Alaska

The dominant sources of the petrogenic hydrocarbon background in benthic sediments of Prince William Sound, AK (PWS), site of the 1989 Exxon-Valdez oil spill, are eroding Tertiary shales and residues of natural oil seepage. Mass balance considerations and statistical analyses of hydrocarbon fingerprints independently indicate that coal contributes generally less than 1% of the polycyclic aromatic hydrocarbons (PAH) and chemical biomarkers in this background. This is environmentally significant because of presumed differences in the bioavailability of PAH in coal, seep oil residues, and shales. Coal particles are present in PWS sediments, but their PAH and chemical biomarker contributions are overwhelmed by those of seep oil residues and organic particles from shales of low-to-high thermally maturity. In the late Tertiary or early Quaternary, the currently exposed and eroding shale formations were heated into the oil-generation window and, consequently, are now relatively rich in extractable PAH and chemical biomarkers. The exposed and eroding coals in the area, in contrast, experienced long hot burial and are now thermally overmature with respect to oil generation. The concentrations of thermally sensitive PAH and biomarker compounds in PWS sediments are not consistent with a mature coal origin but are consistent with the low-to-high maturity shales and seep oils in the area.     

Factors associated with surface iridescence in fresh beef

The objective of this study was to investigate factors associated with surface iridescence in fresh beef. Eight muscles were evaluated for occurrence of surface iridescence: Biceps femoris (BF), Gluteus medius (GM), Longissimus lumborum (LD), Psoas major (PM), Rectus femoris (RF), Semimembranosus (SM), Semitendinosus (ST), and Tensor fasciae latae (TF). Incidence of surface iridescence was 91% for ST, 34% for SM, 27% for LD, 20% for GM, 12% for RF, 9% for BF, 8% for TF, and 6% for PM (P<0.05). Factors associated with surface iridescence in the ST were further examined because iridescence was observed to a much higher degree in the ST as compared with other muscles evaluated. Greater ST surface iridescence was associated with larger ribeye areas, more youthful lean maturity scores, higher L^*, a^* and b^* colorimeter values, lower ultimate pH values, and faster cooking (P<0.05).     

Normal vector generation for sampled data using fourier filtering

A three-dimensional surface is a useful graphic representation of a two-dimensional function which has been sampled on a regular grid. Shading the surface to simulate the effects of direct lighting makes visible small changes in the surface orientation, and enhances realism when the data represents a physical surface such as terrain. Shading interpolation calculations and surface patch generation techniques require the specification of a surface normal vector (or related slope information) at each sample point. These normal vectors are usually generated by averaging local data such as the normal vectors of the surfaces of a triangular mesh connecting the points. This paper describes a technique which uses Fourier filtering to generate normal vectors for two-dimensional sampled data. Images and analysis of frequency spectra are included to show how this technique preserves detail which is lost using the averaging method. Performance figures show that this enhancement of detail in the final image can be achieved for only a small increase in computation time.     

Identification and characterization of a novel human aldose reductase-like gene

We have identified a novel human protein that is highly homologous to aldose reductase (AR). This protein, which we called ARL-1, consists of 316 amino acids, the same size as AR, and its amino acid sequence is 71% identical to that of AR. It is more closely related to the AR-like proteins such as mouse vas deferens protein, fibroblast growth factor-regulated protein, and Chinese hamster ovary reductase, with 81, 82, and 83%, respectively, of its amino acid sequence identical to the amino acid sequence of these proteins. The cDNA of ARL-1 was expressed in Escherichia coli to obtain recombinant protein for characterization of its enzymatic activities. For comparison, the cDNA of human AR was also expressed in E. coli and analyzed in parallel. These two enzymes differ in their pH optima and salt requirement, but they act on a similar spectrum of substrates. Similar to AR, ARL-1 can efficiently reduce aliphatic and aromatic aldehydes, and it is less active on hexoses. While AR mRNA is found in most tissues studied, ARL-1 is primarily expressed in the small intestines and in the colon, with a low level of its mRNA in the liver. The ability of ARL-1 to reduce various aldehydes and the locations of expression of this gene suggest that it may be responsible for detoxification of reactive aldehydes in the digested food before the nutrients are passed on to other organs. Interestingly, ARL-1 and AR are overexpressed in some liver cancers, but it is not clear if they contribute to the pathogenesis of this disease.