The applicability of the flow cytometric sperm chromatin structure assay in epidemiological studies. Asclepios

The impact of demographic, lifestyle, and seminal factors on the sperm chromatin structure assay (SCSA) parameters was evaluated in a population of 277 healthy Danish men. This cohort was established within the framework of a European Concerted Action on occupational hazards to male reproductive capability in order to examine the possible reproductive effects of exposure to styrene or pesticides. The SCSA measures the susceptibility of sperm DNA to in-situ acid-induced denaturation, by multiparameter flow cytometric analysis after staining with the DNA-specific fluorescent dye acridine orange. The green versus red bivariate cytogram patterns were quite variable among donors, showing a wide heterogeneity of sperm DNA denaturability. Nevertheless, in those cases where we had the possibility to measure two semen samples from the same donor, the cytogram pattern remained stable over time (0.64 < r < 0.78). Analysis of variance demonstrated that the SCSA results can be influenced by the age of the donor (P < 0.0001), smoking habits (P < 0.05), the presence of leukocytes and immature germ forms in the ejaculate (P < 0.0001), and the duration of sexual abstinence (P < 0.0001). Furthermore, the relationship between the SCSA data and sperm concentration, morphology, and vitality was weak (-0.22 < r < -0.46). Therefore, the SCSA provides independent and complementary measurements of semen quality and is thus a useful tool for epidemiological studies, but the effects of some confounders should be accounted for in the survey design and analysis.     

The Proteomics Big Challenge for Biomarkers and New Drug-Targets Discovery

In the modern process of drug discovery, clinical, functional and chemical proteomics can converge and integrate synergies. Functional proteomics explores and elucidates the components of pathways and their interactions which, when deregulated, lead to a disease condition. This knowledge allows the design of strategies to target multiple pathways with combinations of pathway-specific drugs, which might increase chances of success and reduce the occurrence of drug resistance. Chemical proteomics, by analyzing the drug interactome, strongly contributes to accelerate the process of new druggable targets discovery. In the research area of clinical proteomics, proteome and peptidome mass spectrometry-profiling of human bodily fluid (plasma, serum, urine and so on), as well as of tissue and of cells, represents a promising tool for novel biomarker and eventually new druggable targets discovery. In the present review we provide a survey of current strategies of functional, chemical and clinical proteomics. Major issues will be presented for proteomic technologies used for the discovery of biomarkers for early disease diagnosis and identification of new drug targets.     

Chain conformations of syndiotactic poly(m-methylstyrene) in the crystalline state

A conformational energy analysis of the isolated chain of syndiotactic poly(m-methylstyrene) under the constraint of a crystalline field is reported. Two different minimum energy conformations having similar energy have been found; the trans-planar conformation with tcm symmetry and the two-fold helical conformation with s(2/1)2 symmetry, according with the observed polymorphic behavior of this polymer. The calculated chain axes are in agreement with the experimental axes of 5.1 and 7.9 Å found for the different polymorphic forms of syndiotactic poly(m-methylstyrene). However, only a metastable disordered modification (form III) having chains in trans-planar conformation has been described. This indicates that, even though the trans-planar conformation is, in the isolated chain as stable as the helical conformation, the packing of the chains in helical conformation is probably more efficient than that of the trans-planar chains.     

Alloying Behaviour of Zinc with Rare Earth Metals: The Er-Pr-Zn System

Zinc based alloys are among the most commonly used light alloys. To improve the knowledge of the ternary systems constituted by zinc with two lanthanides the isothermal section at 400 °C of the Er-Pr-Zn system was studied. Some selected samples at the Er:Pr ratio?=?1:1 were investigated by differential thermal analysis to draw the vertical section of the system. The experimental techniques used were x-ray powder diffraction, scanning electron microscopy, coupled with electron probe microanalysis and differential thermal analysis. No ternary compounds were found in the system. As regard the intermetallic phases, the (Er, Pr)Zn (Er, Pr)Zn₂, (Er, Pr)Zn_3, (Er, Pr)₁₃Zn₅₈ and (Er, Pr)₂Zn₁₇ solid solutions form in the full field of composition, while the ErZn₁₂, Pr₃Zn₁₁ and PrZn₁₁ compounds partially dissolve the third element. The metastable intermetallic binary phases ErZn₅, PrZn₅ and Er₆Zn₂₃ were not found either as ternary solid solutions or as binary compounds in the ternary Er-Pr-Zn system at 400 °C.     

Comparison of the compositional, microbiological, biochemical and volatile profile characteristics of three Italian PDO fermented sausages

Three Italian PDO fermented sausages, Varzi, Brianza and Piacentino, were compared for compositional, microbiological, biochemical and volatile profile characteristics. Mean values for the gross composition varied especially due to moisture, fat, total protein and nitrate concentration which reflected differences in the ingredients and some technological parameters. Cell numbers of the major microbial groups were almost similar among sausages. The major differences were found for Brochothrix thermosphacta, enterococci and moulds. Apart from their use as starters, Lactobacillus sakei and Lactobacillus curvatus were the dominant lactic acid bacteria and, as well as Staphylococcus xylosus, dominated the population of coagulase-negative staphylococci. Sausages differed for the hydrolysis of myofibrillar proteins and secondary proteolysis. Varzi, the sausage subjected to prolonged fermentation at 23–25 °C for 10 days before ripening, showed the highest degree of secondary proteolysis. Varzi and Brianza, the two fermented sausages manufactured by using microbial starters, showed the highest concentration and similar profiles of free amino acids. The peptidase activities contained in the aqueous extracts agreed with the above findings. A total of 52 volatile components, mainly alcohols, aldehydes and terpenes, were identified by solid-phase micro-extraction coupled with gas chromatography–mass spectrometry analysis. The volatile profiles of the three Italian PDO fermented sausages differed in part and, except for terpenes, the highest levels of the other chemical classes were found in Varzi and Brianza sausages. The composition of free fatty acids of the three Italian PDO sausages was rather similar. Monounsaturated fatty acids (MUFA) were found at the highest relative percentage followed by saturated (SFA) and polyunsaturated (PUFA) fatty acids. Oleic, palmitic, linoleic and stearic were the main free fatty acids found in all fermented sausages.     

Modelling and performance of a small siphonic hydropower system

A siphon turbine is a low-head, axial-flow hydropower device that can be installed across an impound structure, such as a weir. A laboratory-scale siphon turbine and generator system is built from both off-the-shelf components and bespoke components designed using well-documented guidance. This paper proposes a modelling method for the system, which allows performance to be assessed as a function of operating variables including head, electric load, runner speed and flow rate. An un-modified, commercially available propeller is used for the runner, whose blade geometry is defined within the model as a set of polynomials. This enables flow angles at any radial position on a blade to be determined as a function of the system operating point. Consequently, the impact of design changes on system performance can be quantified, such as part-load efficiency for example. Testing using the laboratory-scale system is conducted up to a maximum gross head of 0.25 m, to validate the component models and then to demonstrate that the final system model provides satisfactory agreement with experiments over the operational speed and head range. The model therefore permits rapid conceptual design to be carried out without the need for computationally intensive co-optimisation of components.     

Alkaline hydrolysis of the cyclic nitramine explosives RDX,HMX, and CL-20: new insights into degradation pathways obtained by the observation of novel intermediates

Hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX, I) and octahydro-1,3,5,7-tetranitro-1,3,5,7-tetrazocine (HMX) hydrolyze at pH > 10 to form end products including NO2-, HCHO, HCOOH, NH3, and N2O, but little information is available on intermediates, apart from the tentatively identified pentahydro-3,5-dinitro-1,3,5-triazacyclohex-1-ene (II). Despite suggestions that RDX and HMX contaminated groundwater could be economically treated via alkaline hydrolysis, the optimization of such a process requires more detailed knowledge of intermediates and degradation pathways. In this study, we hydrolyzed the monocyclic nitramines RDX, MNX (hexahydro-1-nitroso-3,5-dinitro-1,3,5-triazine), and HMX in aqueous solution (pH 10-12.3) and found that nitramine removal was accompanied by formation of 1 molar equiv of nitrite and the accumulation of the key ring cleavage product 4-nitro-2,4-diazabutanal (4-NDAB, O2NNHCH2NHCHO). Most of the remaining C and N content of RDX, MNX, and HMX was found in HCHO, N2O, HCOOH, and NH3. Consequently, we selected RDX as a model compound and hydrolyzed it in aqueous acetonitrile solutions (pH 12.3) in the presence and absence of hydroxypropyl-beta-cyclodextrin (HP-beta-CD) to explore other early intermediates in more detail. We observed a transient LC-MS peak with a [M-H] at 192 Da that was tentatively identified as 4,6-dinitro-2,4,6-triaza-hexanal (O2NNHCH2NNO2CH2NHCHO, III) considered as the hydrolyzed product of II. In addition, we detected another novel intermediate with a [M-H] at 148 Da that was tentatively identified as a hydrolyzed product of III, namely, 5-hydroxy-4-nitro-2,4-diaza-pentanal (HOCH2NNO2CH2NHCHO, IV). Both III and IV can act as precursors to 4-NDAB. In the case of the polycyclic nitramine 2,4,6,8,10,12-hexanitro-2,4,6,8,10,12-hexaazaisowurtzitane (CL-20), denitration (two NO2-) also led to the formation of HCOOH, NH3, and N2O, but neither HCHO nor 4-NDAB were detected. The results provide strong evidence that initial denitration of cyclic nitramines in water is sufficient to cause ring cleavage followed by spontaneous decomposition to form the final products.