Robust Magnification Independent Colon Biopsy Grading System over Multiple Data Sources

Automated grading of colon biopsy images across all magnifications is challenging because of tailored segmentation and dependent features on each magnification. This work presents a novel approach of robust magnification-independent colon cancer grading framework to distinguish colon biopsy images into four classes: normal, well, moderate, and poor. The contribution of this research is to develop a magnification invariant hybrid feature set comprising cartoon feature, Gabor wavelet, wavelet moments, HSV histogram, color auto-correlogram, color moments, and morphological features that can be used to characterize different grades. Besides, the classifier is modeled as a multiclass structure with six binary class Bayesian optimized random forest (BO-RF) classifiers. This study uses four datasets (two collected from Indian hospitals—Ishita Pathology Center (IPC) of 4X, 10X, and 40X and Aster Medcity (AMC) of 10X, 20X, and 40X—two benchmark datasets—gland segmentation (GlaS) of 20X and IMEDIATREAT of 10X) comprising multiple microscope magnifications. Experimental results demonstrate that the proposed method outperforms the other methods used for colon cancer grading in terms of accuracy (97.25%-IPC, 94.40%-AMC, 97.58%-GlaS, 99.16%-Imediatreat), sensitivity (0.9725-IPC, 0.9440-AMC, 0.9807-GlaS, 0.9923-Imediatreat), specificity (0.9908-IPC, 0.9813-AMC, 0.9907-GlaS, 0.9971-Imediatreat) and F-score (0.9725-IPC, 0.9441-AMC, 0.9780-GlaS, 0.9923-Imediatreat). The generalizability of the model to any magnified input image is validated by training in one dataset and testing in another dataset, highlighting strong concordance in multiclass classification and evidencing its effective use in the first level of automatic biopsy grading and second opinion.     

A novel approach for root distribution analysis of linear time‐invariant systems using Routh and Fuller tables

The root distribution of a given characteristic equation of a linear time‐invariant system can be analyzed with the help of a Routh table using the elements of the first column in the table. In the case of unstable systems, sometimes, a zero element may appear in the third row of the first column of the Routh array. This prematurity can be suitably handled as indicated by various authors. In this paper, the given characteristic polynomial having roots in the right hand plane is multiplied by a suitable polynomial, and Routh and Fuller tables are applied for the resultant polynomial to infer the complete root distribution. Further, the column polynomials from each table are adopted to know more about root distribution, which forms the core of the proposed work. The Routh table helps in counting and locating roots in the s‐plane, and the Fuller table helps in depicting whether the roots are distinct or complex in nature. In this regard, it is shown in this paper that the simultaneous integration of Routh and Fuller tables yields a good amount of information regarding the root distribution in the s‐plane. The newly presented procedure is illustrated with examples. Copyright © 2009 John Wiley and Sons Asia Pte Ltd and Chinese Automatic Control Society     

Remote Access to Multimedia Databases: An Object Oriented Approach

Recent advances in media processing technology have resulted in the generation of vast amounts of multimedia information. There exists a need to manage this information. This paper describes the design and implementation of an object-oriented system used for remote multimedia database access. The work includes the design of a framework to model multimedia information in the object-oriented database POET, the development of a POET multimedia server to provide access to this information and the design of client interfaces to the system.     

Integration of electrokinetic-based multidimensional separation/concentration platform with electrospray ionization-Fourier transform ion cyclotron resonance-mass spectrometry for proteome analysis of Shewanella oneidensis

This work focuses on the development of a multidimensional electrokinetic-based separation/concentration platform coupled with electrospray ionization-Fourier transform ion cyclotron resonance mass spectrometry (ESI-FTICR-MS) for achieving the high resolution and ultrasensitive analysis of complex protein/peptide mixtures. A microdialysis junction is employed as the interface for on-line combination of capillary isoelectric focusing (CIEF) with transient capillary isotachophoresis/zone electrophoresis (CITP/CZE) in an integrated platform. Besides the excellent resolving power afforded by both CIEF and CZE separations, the electrokinetic focusing/stacking effects of CIEF and CITP greatly enhance the dynamic range and detection sensitivity of MS for protein identification. The constructed multidimensional separation/concentration platform is demonstrated for the analysis of Shewanella oneidensis proteome, which has considerable implications toward the bioremediation of environmental pollutants. The electrokinetic-based platform offers the overall peak capacity comparable to those obtained using multidimensional chromatography systems, but with a much shorter run time and no need for column regeneration. Most importantly, a total of 1174 unique proteins, corresponding to 26.5% proteome coverage, are identified from the cytosolic fraction of S. oneidensis, while requiring <500 ng of proteolytic digest loaded in the CIEF capillary. The ultrasensitive capabilities of electrokinetic-based proteome approach are attributed to the concentration effect in CIEF, the electrokinetic stacking of CITP, the nanoscale peak volume in CZE, the "accurate mass tag" strategy for protein/peptide identification, and the high-sensitivity, high-resolution, and high-mass measurement accuracy of FTICR-MS.     

Immunomodulating capacity of kefir

Kefir is a fermented milk produced by the action of lactic acid bacteria, yeasts and acetic acid bacteria, trapped in a complex matrix of polysaccharides and proteins. Beyond its inherent high nutritional value as a source of proteins and calcium, kefir has a long tradition of being regarded as good for health in countries where it is a staple in the diet. However, published human or animal feeding trials to substantiate this view are not numerous. The aim of this work was to determine the immunomodulating capacity of kefir on the intestinal mucosal immune response in mice and to demonstrate the importance of dose and cell viability on this response. BALB/c mice were fed with commercial kefir ad libitum (diluted 1/10, 1/50, 1/100 or 1/200) or pasteurized kefir (diluted 1/6, 1/10, 1/50, 1/100) for 2, 5 or 7 consecutive days. At the end of each feeding period, the bacterial translocation assay was performed in the liver. Small intestine structure was studied by haematoxilin-eosin staining and light microscopy. The number of IgA+ and IgG+ cells was also determined. For the functional doses chosen, cytokines (IL-2, IL-4, IL-6, IL-10, IL-12, TNF-alpha and IFN-gamma) were determined. Kefir and pasteurized kefir were able to modulate the mucosal immune system in a dose-dependent manner. Kefir was administred 10-times more diluted than pasteurized kefir, but it induced an immunomodulation of similar magnitude, indicating the importance of cell viabilty. The results suggest that a Th1 response was controlled by Th2 cytokines induced by kefir feeding. Pasteurized kefir would induce both Th2 and Th1 responses. This is the first study in vivo regarding the mechanisms involved in the immunomodulating capacity of the oral administration of kefir containing viable or heat-inactivated bacteria at different doses.     

Processing of Porous SiC by Aluminum‐Derived Binders and Sacrificial Porogen Leaching Method

Porous SiC was successfully fabricated by a facile and energy efficient sacrificial porogen leaching method using in situ synthesized aluminum‐based binders by reaction bonding at low sintering temperatures of 600–1000°C. Porous SiC ceramics with porosity in the range of 30–58% and compressive strength of 1–33 MPa were obtained. Interconnected bimodal pores were produced by both stacking of SiC particles and leach out of salt. During sintering, the aluminum binder experienced metal to ceramic transformations forming various alumina polymorphs (γ, δ, θ and α‐Al₂O₃). The porogen content and sintering temperatures significantly influence the properties of porous SiC.     

Barriers,biases, and beliefs about arteriovenous fistula placement in children: A survey of the International Pediatric Fistula First Initiative (IPFFI) within the Midwest Pediatric Nephrology Consortium (MWPNC)

There has been recent emphasis on increased arteriovenous fistula (AVF) use and decreased central venous catheter use in hemodialysis (HD) patients. The International Pediatric Fistula First Initiative was founded via collaborative effort with the Midwest Pediatric Nephrology Consortium to alert nephrologists, surgeons, and dialysis staff to consider fistulae as the best access in pediatric HD patients. A multidisciplinary educational DVD outlining expectations and strategies to increase AVF placement and usage in children was created. Participants were administered a survey previewing and postviewing to identify barriers to placement and usage of AVF in children. A total of 52 surveys were subdivided as either “dialysis staff” or “proceduralist” at five centers. Thirty‐three percent of respondents were unaware if their practice was following published guidelines. Sixty‐five percent of respondents stated they referred to a dedicated vascular access surgeon at their respective institutions. Methods used to monitor AVF function included physical exam, venous pressure monitoring, and ultrasound dilution. Vascular access was placed within 3 months in only 35% of patients. Interdisciplinary communication problems between surgeons, interventional radiologists, and nephrologists were identified as a major barrier. Lack of AVF usage was often due to maturation failure. Routine access rounds did not occur in any centers. Regarding monitoring, 74% of the respondents use physical exam, 26% use venous pressure monitoring, and 9% use ultrasound dilution. Ninety‐three percent of dialysis staff stated they would change practice patterns following the intervention; however, 12% of surgeons stated they would alter practice patterns. To our knowledge, this is the first report to identify barriers to placement of AVF in children from the perspectives of multidisciplinary team members including pediatric nephrologists, surgeons, interventional radiologists, and multidisciplinary dialysis staff.     

Long-distance axial trapping with Laguerre-Gaussian beams

We show that the axial spread of the focal volume of a tightly focused beam propagating through a glass-water interface is much reduced for Laguerre-Gaussian (LG) modes as compared to the TEM(00) mode. Therefore, use of the LG beam helps in achieving a significant improvement of the axial trapping range in optical tweezers. We demonstrate the use of LG modes to manipulate biological cells from the bottom layer of the medium to the top surface layer. Exposure of the cells to a higher oxygen concentration at the surface layer is used for estimation of the intramembrane oxygen diffusion rate.     

Photo-polymerized films of lithium ion conducting solid polymer electrolyte for electrochromic windows (ECWs)

Films of solid polymer electrolyte (spe) have been prepared by the photo-polymerization of the monomer: 2-hydroxyethylmethacrylate (HEMA) simultaneously accompanied by chemical crosslinking with neopentyl glycol which is dissolved in a liquid electrolyte, namely, 1 M LiClO₄ in EC:PC binary solvent mixed in two different volume ratios. The spe films exhibit ionic conductivities greater than 10⁻³ Scm⁻¹ at 25°C. Thermal and structural characteristics of the films have been determined by DSC and XRD, respectively. The electrochemical redox behavior of an electrochromic device (PWECD) fabricated with an electrodeposited tungsten oxide film as the primary electrode, a prussian blue film as the counter electrode and a poly(HEMA) based electrolyte film as well as that of the individual components of the device has been examined by cyclic voltammetry. Transmission modulation of 60% (λ=650 nm) shown by the PWECD renders it to be a promising candidate for electrochromic window applications.