Low‐level PGAS computing on many‐core processors with TSHMEM

Diminishing returns from increased clock frequencies and instruction‐level parallelism have forced computer architects to adopt architectures that exploit wider parallelism through multiple processor cores. While emerging many‐core architectures have progressed at a remarkable rate, concerns arise regarding the performance and productivity of numerous parallel‐programming tools for application development. Development of parallel applications on many‐core processors often requires developers to familiarize themselves with unique characteristics of a target platform while attempting to maximize performance and maintain correctness of their applications. The family of partitioned global address space (PGAS) programming models comprises the current state of the art in balancing performance and programmability. One such PGAS approach is SHMEM, a lightweight, shared‐memory programming library that has demonstrated high performance and productivity potential for parallel‐computing systems with distributed‐memory architectures. In the paper, we present research, design, and analysis of a new SHMEM infrastructure specifically crafted for low‐level PGAS on modern and emerging many‐core processors featuring dozens of cores and more. Our approach (with a new library known as TSHMEM) is investigated and evaluated atop two generations of Tilera architectures, which are among the most sophisticated and scalable many‐core processors to date, and is intended to enable similar libraries atop other architectures now emerging. In developing TSHMEM, we explore design decisions and their impact on parallel performance for the Tilera TILE‐Gx and TILEPro many‐core architectures, and then evaluate the designs and algorithms within TSHMEM through microbenchmarking and applications studies with other communication libraries. Our results with barrier primitives provided by the Tilera libraries show dissimilar performance between the TILE‐Gx and TILEPro; therefore, TSHMEM's barrier design takes an alternative approach and leverages the on‐chip mesh network to provide consistent low‐latency performance. In addition, our experiments with TSHMEM show that naive collective algorithms consistently outperformed linear distributed collective algorithms when executed in an SMP‐centric environment. In leveraging these insights for the design of TSHMEM, our approach outperforms the OpenSHMEM reference implementation, achieves similar to positive performance over OpenMP and OSHMPI atop MPICH, and supports similar libraries in delivering high‐performance parallel computing to emerging many‐core systems. Copyright © 2015 John Wiley & Sons, Ltd.     

Adjustment behaviour of capital structure over the business cycles: evidence from the construction industry of Taiwan

Prior studies have found that firms may deviate from the target capital structure in the short run and adjust towards the target in the long run. However, little attention has been given to the adjustment behaviour of capital structure in the construction industry over the business cycles, in particular within the context of emerging markets. The partial adjustment model with the GMM (i.e. generalized method of moments) estimation is used to examine the adjustment behaviour of capital structure in the construction industry within the context of Taiwan during the period 1982 to 2007. The results suggest that, first, the average rate of adjustment is 26.3% of the adjustment gap between the target debt ratios and the previous debt ratios for firms in the construction industry of Taiwan. However, the average rate of adjustment towards the target debt ratios has slowed down after the Asian financial crisis of 1997. Secondly, firms with the financial constraint of over‐leverage relative to the target debt ratios have lower debt ratios than those firms with the financial constraint of under‐leverage. In addition, the difference in debt ratios between firms with the financial constraint of over‐leverage and under‐leverage has become narrower after the Asian financial crisis. Lastly, the findings suggest that macroeconomic conditions do not have a significant, negative effect on debt ratios.     

Synthesis of Alkyl Fructosides

The anomeric alkylation of D-fructose is efficiently catalyzed by mild acid catalysts. Degradation of fructose is negligible under the conditions applied.     

The Relation between Calcium Sequestering Capacity and Oxidation Degree of Dicarboxy-Starch and Dicarboxy-Inulin

The objective of this study was to establish the relation between the calcium sequestering capacity (SC) of dicarboxy-starch and that of dicarboxy-inulin, and the oxidation degree of these products. An S-type curve is obtained when plotting the SC of oxidized starch versus the degree of oxidation. By contrast the sequestering capacity of dicarboxy-inulin increases linearly with the degree of oxidation. The difference in behaviour of these materials can be attributed to the fact that upon starch oxidation the favourable oxydiacetate structure is obtained only after substantial conversion, whereas in inulin this structure is obtained immediately and is present in each oxidized fructose unit.     

Safety assessment of Lactobacillus strains: presence of putative risk factors in faecal, blood and probiotic isolates

The widespread use of immunosuppressive therapy and antimicrobial agents as well as novel probiotics without a long history of safe use has increased requirements for safety assessment of probiotic lactobacilli. In this study 44 faecal, 52 blood and 15 probiotic isolates (including 3 dairy strains) of Lactobacillus were assayed for their adhesion properties to extracellular matrix proteins and mucus, hemolysis, ability to avoid the induction of respiratory burst in peripheral blood mononucleocytes (PMN) and resistance to human serum. Among tested strains adhesion to collagen, fibrinogen and mucus was isolate-specific and no statistically significant differences were obtained between faecal, blood and probiotic isolates. However, blood isolates showed a trend for higher adhesion to mucus than probiotic strains (P=0.07). Probiotic strains induced lower respiratory burst in PMN when compared to the blood isolates (P<0.05). Moreover, there was a positive correlation between adhesion to collagen and induction of respiratory burst for faecal isolates (P<0.05). In the determination of serum resistance, probiotic strains showed a trend for lower sensitivity to human serum-mediated killing when compared to the faecal isolates (P=0.07). None of the measurable virulence factors were found to be present at statistically higher level in clinical blood isolates when compared to faecal and/or probiotic isolates indicating that these factors do not cause risk when safety of probiotics is considered. However, the significance of adhesion to mucus, low induction of respiratory burst in PMN and resistance to human serum-mediated killing may need further evaluation in experimental animal models and in epidemiological data.     

Inorganic thermoelectric materials: A review

Thermoelectric generator, which converts heat into electrical energy, has great potential to power portable devices. Nevertheless, the efficiency of a thermoelectric generator suffers due to inefficient thermoelectric material performance. In the last two decades, the performance of inorganic thermoelectric materials has been significantly advanced through rigorous efforts and novel techniques. In this review, major issues and recent advancements that are associated with the efficiency of inorganic thermoelectric materials are encapsulated. In addition, miscellaneous optimization strategies, such as band engineering, energy filtering, modulation doping, and low dimensional materials to improve the performance of inorganic thermoelectric materials are reported. The methodological reviews and analyses showed that all these techniques have significantly enhanced the Seebeck coefficient, electrical conductivity, and reduced the thermal conductivity, consequently, improved ZT value to 2.42, 2.6, and 1.85 for near-room, medium, and high temperature inorganic thermoelectric material, respectively. Moreover, this review also focuses on the performance of silicon nanowires and their common fabrication techniques, which have the potential for thermoelectric power generation. Finally, the key outcomes along with future directions from this review are discussed at the end of this article.     

Short communication: Molecular characteristics,antimicrobial susceptibility,and pathogenicity of clinical Nocardia cyriacigeorgica isolates from an outbreak of bovine mastitis

The occurrence of nocardial mastitis, mostly in the context of outbreaks, has been reported in many countries. However, there is a paucity of reports regarding detailed characterization of Nocardia cyriacigeorgica from bovine mastitis. Thus, herein we report characteristics, antimicrobial susceptibility patterns, molecular identification, and pathogenicity of N. cyriacigeorgica isolated from an outbreak of clinical mastitis in a dairy herd in northern China. A total of 182 (80.2%) lactating cows had clinical mastitis with severe inflammation and firmness of the udder, reduced milk production, and anorexia, with no apparent clinical response to common antibiotics. Out of 22 mastitic milk samples submitted to our laboratory, 12 N. cyriacigeorgica were isolated and characterized using standard microbiological analysis, 16S rRNA gene sequencing, random amplified polymorphic DNA PCR analysis, biochemical assays, and antibiotic susceptibility testing. Additionally, in vivo experiments were done to determine pathogenicity of these clinical mastitis isolates. All isolates were resistant to ampicillin, amoxicillin-clavulanic acid, ciprofloxacin, minocycline, rifampicin, and aminoglycosides (type VI pattern). Additionally, intramammary inoculation of mice with N. cyriacigeorgica caused chronic inflammatory changes, including hyperemia, edema, and infiltration of lymphocytes and neutrophils, as well as hyperplasia of lymph nodules in mammary glands. Therefore, we concluded that N. cyriacigeorgica was involved in the current outbreak of mastitis. To our best knowledge, this is the first report to characterize N. cyriacigeorgica isolated from cases of bovine mastitis in China.