Chromosomal location of the genetic determinants for bacteriocins produced by Lactobacillus gasseri K7

The production of similar or even identical bacteriocins by different lactic acid bacteria is not a rare event. To take advantage of this finding, genetic determinants of the Lactobacillus K7 bacteriocins were tested for putative homologies with previously described bacteriocins of the Lactobacillus acidophilus group through polymerase chain reaction (PCR). Among specific primer pairs of seven known bacteriocins, derived from their respective sequences, only acidocin LF221 A and B primers amplified fragments in chromosomal DNA of K7 strain that revealed strong similarity over small regions of LF221 bacteriocins. Treatment of Lactobacillus K7 with ethidium bromide and mitomycin C was ineffective in generating non-bacteriocinogenic derivatives and had no impact on plasmid loss either. Classification studies elucidated Lactobacillus K7 as a member of the Lactobacillus gasseri species.     

Towards a detection of grassland cutting practices with dual polarimetric TerraSAR-X data

In this study, polarimetric synthetic aperture radar (SAR) parameters are analysed and compared with in situ measurements in order to develop a methodology for detecting cutting practices within grassland areas. The grasslands were monitored with TerraSAR-X radar imaging in dual polarization HH/VV mode and are located near the banks of the Kasari River, close to the Baltic Sea coast of Estonia. The parameters analysed include HH, VV, HH + VV, and HH – VV backscatter, HH/VV polarimetric coherence magnitude and phase, T₁₂ polarimetric coherence magnitude and phase, and also dual polarimetric entropy, alpha, and alpha dominant parameters. Using these parameters derived from the dual polarimetric TerraSAR-X data set, it was virtually impossible to distinguish tall grass (height >30 cm) from short grass (height <30 cm). On the other hand, it proved feasible to detect areas where grass had been cut and left on the ground. Several parameters showed specific behaviour for the state of grassland and the most notable change was found in the dual polarimetric dominant scattering alpha angle. This angle changed from 10° to 25° after tall grass had been cut and left on the ground. This behaviour of the dominant scattering alpha angle can effectively be described using a particle scattering model for vegetation backscattering.     

Inhibitors of Cyclin-Dependent Kinases: Types and Their Mechanism of Action

Recent studies on cyclin-dependent kinase (CDK) inhibitors have revealed that small molecule drugs have become very attractive for the treatment of cancer and neurodegenerative disorders. Most CDK inhibitors have been developed to target the ATP binding pocket. However, CDK kinases possess a very similar catalytic domain and three-dimensional structure. These features make it difficult to achieve required selectivity. Therefore, inhibitors which bind outside the ATP binding site present a great interest in the biomedical field, both from the fundamental point of view and for the wide range of their potential applications. This review tries to explain whether the ATP competitive inhibitors are still an option for future research, and highlights alternative approaches to discover more selective and potent small molecule inhibitors.     

On the Dependence of Prion and Amyloid Structure on the Folding Environment

Currently available analyses of amyloid proteins reveal the necessity of the existence of radical structural changes in amyloid transformation processes. The analysis carried out in this paper based on the model called fuzzy oil drop (FOD) and its modified form (FOD-M) allows quantifying the role of the environment, particularly including the aquatic environment. The starting point and basis for the present presentation is the statement about the presence of two fundamentally different methods of organizing polypeptides into ordered conformations—globular proteins and amyloids. The present study shows the source of the differences between these two paths resulting from the specificity of the external force field coming from the environment, including the aquatic and hydrophobic one. The water environment expressed in the fuzzy oil drop model using the 3D Gauss function directs the folding process towards the construction of a micelle-like system with a hydrophobic core in the central part and the exposure of polarity on the surface. The hydrophobicity distribution of membrane proteins has the opposite characteristic: Exposure of hydrophobicity at the surface of the membrane protein with an often polar center (as in the case of ion channels) is expected. The structure of most proteins is influenced by a more or less modified force field generated by water through the appropriate presence of a non-polar (membrane-like) environment. The determination of the proportion of a factor different from polar water enables the assessment of the protein status by indicating factors favoring the structure it represents.     

Biogenic amines and their producers in Akawi white cheese

The aim of this work was to study the biogenic amine content of brine‐ripened cheeses after one year of storage and then to investigate possible contaminating micro‐organisms with decarboxylase activity. The biogenic amine production of isolates was tested in vitro. The most frequent biogenic amines were putrescine, histamine and tyramine. The biogenic amine content detected in one cheese sample was above 120 mg/kg; this can be considered toxicologically relevant. Decarboxylase activity was found for 33 contaminating micro‐organisms. Isolates belonging to Bacillus licheniformis, Debaryomyces hansenii, Staphylococcus equorum and Serratia marcescens produced significant amounts of putrescine and cadaverine.     

Structure of the cokes obtained from the group components separated from coking coal vitrites by selective thermosolvolysis

The examination of the structure of cokes obtained from extracts separated from preheated vitrites of coking coals by progressive and continuous extraction with chloroform was carried out. The structural ordering (interplanar spacing and crystallite dimensions) of the cokes depends on the rank of the parent vitrites but it does not depend on the degree of extraction. The occurrence of optical anisotropy in cokes from the extracts is connected with both the rank of the parent vitrite and the degree of extraction. In the formation of the optical anisotropic structure during the carbonization of coking coal vitrites, the part of the extract which is of small size, which partially undergoes decomposition, is an important factor.     

The Effect of Hypoxia on the Expression of CXC Chemokines and CXC Chemokine Receptors—A Review of Literature

Hypoxia is an integral component of the tumor microenvironment. Either as chronic or cycling hypoxia, it exerts a similar effect on cancer processes by activating hypoxia-inducible factor-1 (HIF-1) and nuclear factor (NF-κB), with cycling hypoxia showing a stronger proinflammatory influence. One of the systems affected by hypoxia is the CXC chemokine system. This paper reviews all available information on hypoxia-induced changes in the expression of all CXC chemokines (CXCL1, CXCL2, CXCL3, CXCL4, CXCL5, CXCL6, CXCL7, CXCL8 (IL-8), CXCL9, CXCL10, CXCL11, CXCL12 (SDF-1), CXCL13, CXCL14, CXCL15, CXCL16, CXCL17) as well as CXC chemokine receptors—CXCR1, CXCR2, CXCR3, CXCR4, CXCR5, CXCR6, CXCR7 and CXCR8. First, we present basic information on the effect of these chemoattractant cytokines on cancer processes. We then discuss the effect of hypoxia-induced changes on CXC chemokine expression on the angiogenesis, lymphangiogenesis and recruitment of various cells to the tumor niche, including myeloid-derived suppressor cells (MDSCs), tumor-associated macrophages (TAMs), tumor-associated neutrophils (TANs), regulatory T cells (T_regs) and tumor-infiltrating lymphocytes (TILs). Finally, the review summarizes data on the use of drugs targeting the CXC chemokine system in cancer therapies.     

Recycled Polyolefin Blends: Effect of Modified Natural Zeolite on their Properties and Morphology

The purpose of this study is to investigate the effect of treated natural zeolite on the flow behavior, morphology, thermal, and mechanical properties in recycled polyolefin blends. A model polymer blend consisting of 95 wt% polyolefines and 5 wt% polystyrene was studied. Compositions from this recycled blend and dehydrated zeolite in a narrow concentration range (0–5 wt%) were treated with maleic anhydride-grafted polypropylene and initiator dicumyl peroxide. The compositions were characterized by capillary rheometry, wide-angle X-ray scattering, differential scanning calorimetry, scanning electron microscopy, and mechanical tests. The results show a compatibilizing effect of treated zeolite expressed by increase of shear viscosity and improvement of interfacial interactions and impact strength. The results can open wide possibilities for utilization of treated zeolite in recycling of unsorted polymer wastes.     

Microwave plasma‐initiated grafting of acrylic acid on Celgard 2500 membrane to prepare alkaline battery separators—Characteristics of process and product

A process of plasma‐initiated grafting of acrylic acid on commercial porous polypropylene membrane was studied. The influence of parameters of the plasma (power, gas pressure, time plasma‐sample distance, sample arrangement) and grafting (solvent composition, monomer concentration, time, inhibitor presence) on the degree of grafting, amount of homopolymer produced and surface electrical resistance was determined. A degree of grafting up to 18 mmol/g was obtained, which resulted in sample resistance as low as 30 mΩ cm². The molecular weight of AAc homopolymer that can be assumed as equal to the MW of grafted chains, ranged from 25,000 to 50,000,000 da. SEM and water permeability measurements show that grafting causes filling of the pores, which, however, does not stop K⁺ ions from penetrating the membrane. The performance of nickel‐cadmium cells with acrylic acid grafted membranes as separator is also presented. © 2009 Wiley Periodicals, Inc. J Appl Polym Sci, 2010     

Accelerated weathering of pectin/poly(vinyl alcohol) blends studied by spectroscopic methods

The blends of pectin (PEC) and poly(vinyl alcohol) (PVA) at different components ratios were prepared by mixing in water. Thin polymeric films of PEC/PVA blends and pure polymers were obtained by casting method. All samples were then artificially aged using Suntest apparatus (Atlas) up to 780 h. The changes in chemical structure during sample ageing have been monitored by infrared and ultraviolet‐visible absorption spectroscopies. The first stage of weathering (up to ～ 300 h) was very slow and alteration of chemical structure was negligible in all samples. Prolonged ageing (>300 h) caused more significant degradation processes. FTIR spectra exhibited the highest changes in hydroxyl and carbonyl band ranges indicating the efficient photooxidation of macromolecules. The mechanisms of the observed processes have been discussed. It was found that PVA undergoes faster photoxidative degradation than pectin aged at the same conditions. The PEC/PVA blends exhibited the improved resistance to weathering comparing with both polymers aged individually. Mutual stabilization effect can be explained by intermolecular interactions between PEC and PVA confirmed by spectroscopic methods. © 2011 Wiley Periodicals, Inc. J Appl Polym Sci, 2011