Purification and characterisation of relevant natural and recombinant apple allergens

Apple (Malus domestica) is the most widely cultivated fruit crop in Europe and frequently causes allergic reactions with a variable degree of severity. So far, four apple allergens Mal d 1, Mal d 2, Mal d 3 and Mal d 4 have been identified. Mal d 1, a Bet v 1 related allergen, and Mal d 4, apple profilin, are sensitive to proteolytic degradation, whereas Mal d 2, a thaumatin-like protein and Mal d 3, a nonspecific lipid transfer protein, are rather stable to proteolytic processes. Mal d 1 and Mal d 4 were purified after expression in Escherichia coli expression system, while Mal d 2 and Mal d 3 were purified from apple fruit tissue. All purified proteins were subjected to detailed physicochemical characterisation to confirm their structural integrity and maintained IgE binding capacity. Detailed investigations of carbohydrate moieties of Mal d 2 demonstrated their involvement in the overall IgE binding capacity of this allergen. It was concluded that the folded structure and IgE binding capacity of all four allergens were preserved during purification.     

Long-Term Dynamic Modeling Approach to Quantifying Attached Algal Growth and Associated Impacts on Dissolved Oxygen in the Lower Truckee River, Nevada

Nutrient loads enter the lower Truckee River of western Nevada, affecting the growth of attached algae (periphyton) which causes depressed nighttime dissolved oxygen (DO) levels. The lower Truckee River is home to the endangered cui-ui and threatened Lahontan cut-throat trout, with DO standards being established to in part protect these species. Hydrodynamics, nutrient concentrations, periphyton biomass, and DO data spanning August 2000–December 2001 were used to calibrate and verify a modified version of the Water Quality Analysis Simulation Program Version 5 (WASP5). Under typical loading conditions the periphyton community is nitrogen limited, however nitrogen loading from an upstream wastewater treatment facility increased greatly during the analysis period due to approved site construction activities (discharge permit excursion) causing the periphyton community to temporarily become phosphorus limited. The developed modeling approach, with limited calibration, was able to accurately track dynamic system responses. Removing the impact of the noted discharge permit excursion resulted in a minimum computed DO value of 4.13?mg/L, occurring at the downstream end of the modeling domain on August 8, 2001. Additionally removing the impact of all nutrient loads from area agriculture resulted in a predicted minimum DO value of 4.54?mg/L, while also shifting its location significantly upstream and its timing to April 26, 2001. Meeting all prescribed DO standards required establishing a minimum in-stream flow value of 1.81?m3/s (64.0?ft3/s) downstream of Derby Dam.     

Design, synthesis and biological evaluation of Trypanosoma brucei trypanothione synthetase inhibitors

Trypanothione synthetase (TryS) is essential for the survival of the protozoan parasite Trypanosoma brucei, which causes human African trypanosomiasis. It is one of only a handful of chemically validated targets for T. brucei in vivo. To identify novel inhibitors of TbTryS we screened our in-house diverse compound library that contains 62,000 compounds. This resulted in the identification of six novel hit series of TbTryS inhibitors. Herein we describe the SAR exploration of these hit series, which gave rise to one common series with potency against the enzyme target. Cellular studies on these inhibitors confirmed on-target activity, and the compounds have proven to be very useful tools for further study of the trypanothione pathway in kinetoplastids.     

Large-scale parallel arrays of silicon nanowires via block copolymer directed self-assembly

Extending the resolution and spatial proximity of lithographic patterning below critical dimensions of 20 nm remains a key challenge with very-large-scale integration, especially if the persistent scaling of silicon electronic devices is sustained. One approach, which relies upon the directed self-assembly of block copolymers by chemical-epitaxy, is capable of achieving high density 1?:?1 patterning with critical dimensions approaching 5 nm. Herein, we outline an integration-favourable strategy for fabricating high areal density arrays of aligned silicon nanowires by directed self-assembly of a PS-b-PMMA block copolymer nanopatterns with a L(0) (pitch) of 42 nm, on chemically pre-patterned surfaces. Parallel arrays (5 × 10(6) wires per cm) of uni-directional and isolated silicon nanowires on insulator substrates with critical dimension ranging from 15 to 19 nm were fabricated by using precision plasma etch processes; with each stage monitored by electron microscopy. This step-by-step approach provides detailed information on interfacial oxide formation at the device silicon layer, the polystyrene profile during plasma etching, final critical dimension uniformity and line edge roughness variation nanowire during processing. The resulting silicon-nanowire array devices exhibit Schottky-type behaviour and a clear field-effect. The measured values for resistivity and specific contact resistance were ((2.6 ± 1.2) × 10(5)Ωcm) and ((240 ± 80) Ωcm(2)) respectively. These values are typical for intrinsic (un-doped) silicon when contacted by high work function metal albeit counterintuitive as the resistivity of the starting wafer (～10 Ωcm) is 4 orders of magnitude lower. In essence, the nanowires are so small and consist of so few atoms, that statistically, at the original doping level each nanowire contains less than a single dopant atom and consequently exhibits the electrical behaviour of the un-doped host material. Moreover this indicates that the processing successfully avoided unintentional doping. Therefore our approach permits tuning of the device steps to contact the nanowires functionality through careful selection of the initial bulk starting material and/or by means of post processing steps e.g. thermal annealing of metal contacts to produce high performance devices. We envision that such a controllable process, combined with the precision patterning of the aligned block copolymer nanopatterns, could prolong the scaling of nanoelectronics and potentially enable the fabrication of dense, parallel arrays of multi-gate field effect transistors.     

Inhibitory activity of plumbagin produced by Drosera intermedia on food spoilage fungi

BACKGROUND: The aim of this study was to investigate the growth‐inhibiting efficacy of Drosera intermedia extracts (water, methanol and n‐hexane) against four food spoilage yeasts and five filamentous fungi strains responsible for food deterioration and associated with mycotoxin production, in order to identify potential antimycotic agents. RESULTS: The n‐hexane extract showed a broad activity spectrum against all tested microorganisms, followed, in activity, by the methanol and water extracts. The major component of the n‐hexane extract was purified using a solid‐phase extraction column and identified as plumbagin. Results show that high‐purity plumbagin can be produced from D. intermedia cultures following a simple and effective isolation procedure. A sample of purified plumbagin was tested against the same panel of microorganisms and high growth‐inhibiting capacity was observed. Minimum inhibitory concentrations less than 2 µg mL^?1 were obtained against the filamentous fungi. In the case of the species Aspergillus fumigatus, A. niger and A. flavus , activities comparable to miconazole were obtained. CONCLUSION: The results obtained provided evidence of the antimycotic activity of plumbagin, suggesting that D. intermedia could be the source of an interesting compound for the food industry as an alternative to preservatives. Copyright © 2011 Society of Chemical Industry     

Synthesis and electrical properties of the (PVA)0.7(KI)0.3·xH2SO4 (0 ≤ x ≤ 5) polymer electrolytes and their performance in a primary Zn/MnO2 battery

Solid acid polymer electrolytes (SAPE) were synthesised using polyvinyl alcohol, potassium iodide and sulphuric acid in different molar ratios by solution cast technique. The temperature dependent nature of electrical conductivity and the impedance of the polymer electrolytes were determined along with the associated activation energy. The electrical conductivity at room temperature was found to be strongly depended on the amorphous nature of the polymers and H₂SO₄ concentration. The ac (100 Hz to 10 MHz) and dc conductivities of the polymer electrolytes with different H₂SO₄ concentrations were analyzed. A maximum dc conductivity of 1.05 × 10⁻³ S cm⁻¹ has been achieved at ambient temperature for electrolytes containing 5 M H₂SO₄. The frequency and temperature dependent dielectric and electrical modulus properties of the SAPE were studied. The charge transport in the present polymer electrolyte was obtained using Wagner's polarization technique, which demonstrated the charge transport to be mainly due to ions. Using these solid acid polymer electrolytes novel Zn/SAPE/MnO₂ solid state batteries were fabricated and their discharge capacity was calculated. An open circuit voltage of 1.758 V was obtained for 5 M H₂SO₄ based Zn/SAPE/MnO₂ battery.     

Electrical double-layer capacitors: evaluation of ageing phenomena during cycle life testing

This paper represents an assessment of the main ageing phenomena in electrical double-layer capacitors (EDLCs). In this study the cycle life of the EDLC cells with a rated capacitance of 1,600 F has been investigated at different ambient temperatures and current rates. From the experimental results we can observe that the impact of the high ambient temperature is significant on the cycle life of the cells. Moreover, the results also show the negative impact of the current rate. The internal resistance tests showed that the increase of the resistance is much higher than the decrease of the capacitance. Thus, the ageing of the EDLC during cycling was clearly non-linear. Further the EIS measurements indicated the higher increase of the imaginary part of the impedance at low frequencies during cycling, which indicates the capacitance fade.     

Simultaneous segmentation of prostatic zones using Active Appearance Models with multiple coupled levelsets

In this work we present an improvement to the popular Active Appearance Model (AAM) algorithm, that we call the Multiple-Levelset AAM (MLA). The MLA can simultaneously segment multiple objects, and makes use of multiple levelsets, rather than anatomical landmarks, to define the shapes. AAMs traditionally define the shape of each object using a set of anatomical landmarks. However, landmarks can be difficult to identify, and AAMs traditionally only allow for segmentation of a single object of interest. The MLA, which is a landmark independent AAM, allows for levelsets of multiple objects to be determined and allows for them to be coupled with image intensities. This gives the MLA the flexibility to simulataneously segmentation multiple objects of interest in a new image.In this work we apply the MLA to segment the prostate capsule, the prostate peripheral zone (PZ), and the prostate central gland (CG), from a set of 40 endorectal, T2-weighted MRI images. The MLA system we employ in this work leverages a hierarchical segmentation framework, so constructed as to exploit domain specific attributes, by utilizing a given prostate segmentation to help drive the segmentations of the CG and PZ, which are embedded within the prostate. Our coupled MLA scheme yielded mean Dice accuracy values of .81, .79 and .68 for the prostate, CG, and PZ, respectively using a leave-one-out cross validation scheme over 40 patient studies. When only considering the midgland of the prostate, the mean DSC values were .89, .84, and .76 for the prostate, CG, and PZ respectively.     

Confidence intervals in repeated-measures designs: The number of observations principle.

Since the publication of Loftus and Masson’s (1994) method for computing confidence intervals (CIs) in repeated-measures (RM) designs, there has been uncertainty about how to apply it to particular effects in complex factorial designs. Masson and Loftus (2003) proposed that RM CIs for factorial designs be based on number of observations rather than number of participants. However, determining the correct number of observations for a particular effect can be complicated, given the variety of effects occurring in factorial designs. In this paper the authors define a general “number of observations” principle, explain why it obtains, and provide step-by-step instructions for constructing CIs for various effect types. The authors illustrate these procedures with numerical examples. (PsycINFO Database Record (c) 2010 APA, all rights reserved)