Using regression makes extraction of shared variation in multiple datasets easy

In many data analysis tasks it is important to understand the relationships between different datasets. Several methods exist for this task but many of them are limited to two datasets and linear relationships. In this paper, we propose a new efficient algorithm, termed cocoreg, for the extraction of variation common to all datasets in a given collection of arbitrary size. cocoreg extends redundancy analysis to more than two datasets, utilizing chains of regression functions to extract the shared variation in the original data space. The algorithm can be used with any linear or non-linear regression function, which makes it robust, straightforward, fast, and easy to implement and use. We empirically demonstrate the efficacy of shared variation extraction using the cocoreg algorithm on five artificial and three real datasets.     

Airborne discrete-return LIDAR data in the estimation of vertical canopy cover, angular canopy closure and leaf area index

Remote sensing of forest canopy cover has been widely studied recently, but little attention has been paid to the quality of field validation data. Ecological literature has two different coverage metrics. Vertical canopy cover (VCC) is the vertical projection of tree crowns ignoring within-crown gaps. Angular canopy closure (ACC) is the proportion of covered sky at some angular range around the zenith, and can be measured with a field-of-view instrument, such as a camera. We compared field-measured VCC and ACC at 15° and 75° from the zenith to different LiDAR (Light Detection and Ranging) metrics, using several LiDAR data sets and comprehensive field data. The VCC was estimated to a high precision using a simple proportion of canopy points in first-return data. Confining to a maximum 15° scan zenith angle, the absolute root mean squared error (RMSE) was 3.7-7.0%, with an overestimation of 3.1-4.6%. We showed that grid-based methods are capable of reducing the inherent overestimation of VCC. The low scan angles and low power settings that are typically applied in topographic LiDARs are not suitable for ACC estimation as they measure in wrong geometry and cannot easily detect small within-crown gaps. However, ACC at 0-15° zenith angles could be estimated from LiDAR data with sufficient precision, using also the last returns (RMSE 8.1-11.3%, bias -6.1-+4.6%). The dependency of LiDAR metrics and ACC at 0-75° zenith angles was nonlinear and was modeled from laser pulse proportions with nonlinear regression with a best-case standard error of 4.1%. We also estimated leaf area index from the LiDAR metrics with linear regression with a standard error of 0.38. The results show that correlations between airborne laser metrics and different canopy field characteristics are very high if the field measurements are done with equivalent accuracy.     

Spatially resolved measurements of electron cyclotron resonance ion source beam profile characteristics

Simulations predict that the concentric rings and the triangular structures in the profiles of strongly focused ion beams that are found in different experiments should be dominated by ion species with the same or at least similar m/q-ratio. To verify these theoretical predictions we have tuned our ECR ion source to deliver a beam consisting of multiple ion species whose particular m/q-depending focusing ranges from weakly focused to overfocused. We then recorded spatially resolved charge-state distributions of the beam profile at characteristic positions in the plane perpendicular to the beam line. The results validate theoretical predictions and are summarized in this paper. To achieve the required beam profile characteristics we moved the extraction along the beam line to achieve stronger focusing than by only changing the extraction voltage. To fit the regions of interest of the beam profile into the transmission area of the sector magnet, we steered the beam by moving the extraction in the plane perpendicular to the beam axis. The results of both investigations, beam focusing and beam steering by using a 3D-movable extraction, are also reported in this paper. A brief overview of the new beam monitor extensively used during these measurements, the Faraday cup array, is also given.     

A 3D micromechanical study of deformation curves and cell wall stresses in wood under transverse loading

The deformation of wood is analyzed using the finite element method to quantify the phenomena in wood cells and cell walls. The deformation curves of computed microstructures are compared to experimental observations in two different loading cases: compression and combination of shear and compression. Simulated and experimental shapes of deformation curves match qualitatively and the deformation shapes exhibit a similar response to change in the loading mode. We quantify the intra-cell-wall stresses to understand the effects of the different layers during the deformation. The results benefit the development of energy efficient mechanical and chemo-mechanical pulping processes for pulp, board, and composite manufacture. In addition, the aspects of cell deformation can be exploited to dismantle the wood to accelerate chemical reactions in biorefinery.     

Tailored surface properties of semi-fluorinated block copolymers by electrospinning

Diblock copolymers based on polystyrene (PS) macroinitiators and four different fluorinated monomers (perfluorooctyl ethyl methacrylate (FMA), pentafluorostyrene (FS), perfluorooctyl-ethylene oxymethyl styrene (EMS), 2,3,5,6-tetrafluoro-4-(3,3,4,4,5,5,6,6,7,7,8,8,9,9,10,10,10-heptadecafluorodecaoxy)styrene (FSF)) were synthesized via atom transfer radical polymerization (ATRP). The lengths of the PS and fluorinated blocks were altered and the surface and self-assembling properties of the polymers were compared with respect to the fluorinated monomer used and the fluorine content. The surface properties, contact angles and surface tension, were enhanced by the existence of the CF₃ groups at the end of the alkyl chains compared with poly(pentafluorostyrene). Hydrophobicity of the surfaces was further enhanced by electrospinning the polymer solutions, which yielded superhydrophobic surfaces with water contact angles >150° for polymers having CF₃ groups.     

Atomic layer deposition and characterization of biocompatible hydroxyapatite thin films

Atomic layer deposition (ALD) was used to produce hydroxyapatite from Ca(thd)₂ (thd = 2,2,6,6-tetramethyl-3,5-heptanedionato) and (CH₃O)₃PO onto Si(100) and Corning (0211). Film crystallinity, stoichiometry, possible impurities and surface morphology were determined. The as-deposited films contained significant amounts of carbonate impurities however, annealing at moist N₂ flow reduced the carbonate content even at 400 °C. The as-deposited Ca-P-O films were amorphous but rapid thermal annealing promoted the formation of the hydroxyapatite phase. Mouse MC 3T3-E1 cells were used for the cell culture experiments. According to the bioactivity studies cell proliferation was enhanced on as-deposited ALD-grown Ca-P-O films and greatly enhanced on films annealed at 500 °C in comparison with reference cells on borosilicate glass or cell culture polystyrene.     

How attentional systems process conflicting cues. The superiority of social over symbolic orienting revisited.

We investigated orienting of attention by social and symbolic cues presented inside/outside the locus of attention. Participants responded to laterally presented targets preceded by simultaneously presented gaze and arrow cues. Participants’ attention was allocated to either of the cues and the other cue served as a distractor. In Experiments 1–4 nonpredictive cues were employed. The validity of the attended cue and distractor were varied orthogonally. Valid cues and distractors produced additive facilitation to reaction times when compared to invalid cues and distractors. The effects of gaze and arrow distractors were similar. When the cue was 100% valid and the distractor 50% valid (Experiment 5), distractor validity had no effect on reaction times. When realistic gaze and arrow cues were employed (Experiment 6), arrow but not gaze distractors influenced the reaction times. The results suggest that social and symbolic directional information can be integrated for attention orienting. The processing of social and symbolic directional information can be modulated by top-down control, but the efficiency of the control depends on the visual saliency of the cues. (PsycINFO Database Record (c) 2010 APA, all rights reserved)     

Space-time constant modulus algorithm for multipath removal on the reference signal exploited by passive bistatic radar

The authors address the problem of multipath cancellation in the reference signal used in passive bistatic radar (PBR), which exploits an existing transmitter as emitter of opportunity. The presence of multipath echoes in the reference signal is demonstrated to strongly affect the detection performance of passive radar. Based on the well-known constant modulus algorithm (CMA) approach in the time-domain, new multi-dimensional techniques are considered for the adaptive equalisation of the reference signal based on an array of antennas and multiple receiving channels. The effectiveness of these techniques for PBR purposes is demonstrated with reference to typical simulated scenarios. The considered strategies, addressed as space-CMA and space-time-CMA, are shown to be able to recover the performance loss because of the multipath contribution in the reference signal so that they appear as very appealing solutions for PBR equipped with an array of antennas and multiple receiving channels.     

Emotional scenes in peripheral vision: Selective orienting and gist processing, but not content identification.

Emotional-neutral pairs of visual scenes were presented peripherally (with their inner edges 5.2° away from fixation) as primes for 150 to 900 ms, followed by a centrally presented recognition probe scene, which was either identical in specific content to one of the primes or related in general content and affective valence. Results indicated that (a) if no foveal fixations on the primes were allowed, the false alarm rate for emotional probes was increased; (b) hit rate and sensitivity (A') were higher for emotional than for neutral probes only when a fixation was possible on only one prime; and (c) emotional scenes were more likely to attract the first fixation than neutral scenes. It is concluded that the specific content of emotional or neutral scenes is not processed in peripheral vision. Nevertheless, a coarse impression of emotional scenes may be extracted, which then leads to selective attentional orienting or--in the absence of overt attention--causes false alarms for related probes. (PsycINFO Database Record (c) 2010 APA, all rights reserved)