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21.
Chaichanavong P. Marcus B.H. 《IEEE transactions on information theory / Professional Technical Group on Information Theory》2003,49(5):1231-1250
A constrained system is presented by a finite-state labeled graph. For such systems, we focus on block-type-decodable encoders, comprising three classes known as block, block-decodable, and deterministic encoders. Franaszek (1968) gives a sufficient condition which guarantees the equality of the optimal rates of block-decodable and deterministic encoders for the same block length. We introduce another sufficient condition, called the straight-line condition, which yields the same result. Run-length limited RLL(d,k) and maximum transition run MTR(j,k) constraints are shown to satisfy both conditions. In general, block-type-decodable encoders are constructed by choosing a subset of states of the graph to be used as encoder states. Such a subset is known as a set of principal states. For each type of encoder and each block length, a natural problem is to find a set of principal states which maximizes the code rate. We show how to compute the asymptotically optimal sets of principal states for deterministic encoders and how they are related to the case of large but finite block lengths. We give optimal sets of principal states for MTR(j,k)-block-type-decodable encoders for all codeword lengths. Finally we compare the code rate of nonreturn to zero inverted (NRZI) encoders to that of corresponding nonreturn to zero (NRZ) and signed NRZI encoders. 相似文献
22.
23.
Jung-Han Kimn Marcus Sarkis 《Computer Methods in Applied Mechanics and Engineering》2007,196(8):1507-1514
Overlapping balancing domain decomposition methods and their combination with restricted additive Schwarz methods are proposed for the Helmholtz equation. These new methods also extend previous work on non-overlapping balancing domain decomposition methods toward simplifying their coarse problems and local solvers. They also extend restricted Schwarz methods, originally designed to overlapping domain decomposition and Dirichlet local solvers, to the case of non-overlapping domain decomposition and/or Neumann and Sommerfeld local solvers. Finally, we introduce coarse spaces based on partitions of unity and planes waves, and show how oblique projection coarse problems can be designed from restricted additive Schwarz methods. Numerical tests are presented. 相似文献
24.
25.
Algoet P.H. Marcus B.H. 《IEEE transactions on information theory / Professional Technical Group on Information Theory》1992,38(4):1276-1291
An irreducible Markov chain with stationary transition probabilities on a finite directed graph is considered. The probability of large deviations of the random variable denoting the empirical type of the first n transitions is investigated 相似文献
26.
Confluent graphs capture the connection properties of train tracks, offering a very natural generalization of planar graphs,
and—as the example of railroad maps shows—are an important tool in graph visualization. In this paper we continue the study
of confluent graphs, introducing strongly confluent graphs and tree-confluent graphs. We show that strongly confluent graphs
can be recognized in NP (the complexity of recognizing confluent graphs remains open). We also give a natural elimination
ordering characterization of tree-confluent graphs, and we show that this class coincides with the (6,2)-chordal bipartite
graphs. Finally, we define outerconfluent graphs and identify the bipartite permutation graphs as a natural subclass. 相似文献
27.
GS Bhudhikanok J Lim R Marcus A Harkins RB Moss LK Bachrach 《Canadian Metallurgical Quarterly》1996,97(1):103-111
The responses to heat shock in Tritrichomonas mobilensis, a squirrel monkey parasite and Tritrichomonas augusta, an amphibian trichomonad, were evaluated by means of metabolic labeling with [35S]methionine. Electrophoretically separated trichomonad proteins synthesized at different temperatures were visualized by autoradiography and the label incorporation quantitated by a trichloroacetic acid precipitation procedure. A considerable difference in thermotolerance between the two species was found as the protein synthesis reached a maximum at 41 C in T. mobilensis and 37 C in T. augusta. The latter tolerated temperature increases 13 C above normal cultivation temperatures as compared to only 4 C thermotolerance range above normal in T. mobilensis. Major heat shock proteins (Hsps) were expressed in both T. mobilensis (with apparent Mr 94, 72, and 58 kDa) and T. augusta (Mr 94, 70, and 56 kDa) as revealed by autoradiography. Western blot analysis with polyclonal antibody against DnaK of Escherichia coli showed the presence of antigenic Hsp70 homologs in both trichomonads. Similarly, a polyclonal antibody against Hsp60 with broad interspecies cross-reactivity detected Hsp60 homologs in both T. mobilensis and T. augusta. The anti-DnaK antibody cross-reacted with a T. mobilensis protein localized in Golgi apparatus as demonstrated by immunoelectron microscopy. Immunocytochemistry on trichomonad frozen sections revealed the presence of the Hsp60 homolog in light-microscopic granules corresponding to hydrogenosomes. 相似文献
28.
Reinhard Hainisch Margit Gfoehler M. Zubayer-Ul-Karim Marcus G. Pandy 《Multibody System Dynamics》2012,28(1-2):143-156
Accurate knowledge of muscle-tendon parameters in biomechanical models is critical for accurate simulation and analyses of human movement. An excellent example of this is the creation of subject-specific models from magnetic resonance imaging (MRI). When Hill-type muscle models are used to calculate muscle forces, the determination of muscle attachment points, optimal fiber length, tendon slack length and maximum isometric force all have a significant influence on the joint moment-angle behavior of the model. In the present study a method was developed for customizing the values of muscle-tendon parameters in a generic model to create subject-specific biomechanical models from MRI. The method was applied by generating musculoskeletal models for the biomechanical simulation platform OpenSim, but the workflow is equally well applicable to other simulation platforms. New computational algorithms are described for identifying joint centers and for reconstructing the centroids of the muscle bellies from MRI. A?process is also described for the extraction of the muscle paths and for identifying the positions of ??via-points?? used to model muscles wrapping over bones. Finally, a new algorithm is described for adjusting the values of optimal fiber length, tendon slack length and maximum isometric force based on a comparison of the model results with experiment. We tested our computational algorithms by developing subject-specific biomechanical models of five typically developed children (age 9.5±1.7?years) from MRI. The joint moment-angle relationships calculated for the subject-specific models were similar to those determined for corresponding scaled generic models. The results indicate that the proposed methodology is suitable for developing subject-specific models of healthy children. Future studies should investigate how abnormalities of the musculoskeletal system, such as tibial torsion and muscle spasticity, can be integrated into the modeling process. 相似文献
29.
Jan Haas Karen S. Frese Farbod Sedaghat-Hamedani Elham Kayvanpour Rewati Tappu Rouven Nietsch Oguz Firat Tugrul Michael Wisdom Carsten Dietrich Ali Amr Tanja Weis Torsten Niederdrnk Michael P. Murphy Thomas Krieg Marcus Drr Uwe Vlker Jens Fielitz Norbert Frey Stephan B. Felix Andreas Keller Hugo A. Katus Benjamin Meder 《International journal of molecular sciences》2021,22(4)
With more than 25 million people affected, heart failure (HF) is a global threat. As energy production pathways are known to play a pivotal role in HF, we sought here to identify key metabolic changes in ischemic- and non-ischemic HF by using a multi-OMICS approach. Serum metabolites and mRNAseq and epigenetic DNA methylation profiles were analyzed from blood and left ventricular heart biopsy specimens of the same individuals. In total we collected serum from n = 82 patients with Dilated Cardiomyopathy (DCM) and n = 51 controls in the screening stage. We identified several metabolites involved in glycolysis and citric acid cycle to be elevated up to 5.7-fold in DCM (p = 1.7 × 10−6). Interestingly, cardiac mRNA and epigenetic changes of genes encoding rate-limiting enzymes of these pathways could also be found and validated in our second stage of metabolite assessment in n = 52 DCM, n = 39 ischemic HF and n = 57 controls. In conclusion, we identified a new set of metabolomic biomarkers for HF. We were able to identify underlying biological cascades that potentially represent suitable intervention targets. 相似文献
30.
Elisabeth M. Haberl Thomas S. Weiss Georg Peschel Kilian Weigand Nikolai Khler Josch K. Pauling Jürgen J. Wenzel Marcus Hring Sabrina Krautbauer Gerhard Liebisch Christa Buechler 《International journal of molecular sciences》2021,22(10)
Hepatocellular carcinoma (HCC) still remains a difficult to cure malignancy. In recent years, the focus has shifted to lipid metabolism for the treatment of HCC. Very little is known about hepatitis B virus (HBV) and C virus (HCV)-related hepatic lipid disturbances in non-malignant and cancer tissues. The present study showed that triacylglycerol and cholesterol concentrations were similar in tumor adjacent HBV and HCV liver, and were not induced in the HCC tissues. Higher levels of free cholesterol, polyunsaturated phospholipids and diacylglycerol species were noted in non-tumorous HBV compared to HCV liver. Moreover, polyunsaturated phospholipids and diacylglycerols, and ceramides declined in tumors of HBV infected patients. All of these lipids remained unchanged in HCV-related HCC. In HCV tumors, polyunsaturated phosphatidylinositol levels were even induced. There were no associations of these lipid classes in non-tumor tissues with hepatic inflammation and fibrosis scores. Moreover, these lipids did not correlate with tumor grade or T-stage in HCC tissues. Lipid reprogramming of the three analysed HBV/HCV related tumors mostly resembled HBV-HCC. Indeed, lipid composition of non-tumorous HCV tissue, HCV tumors, HBV tumors and HBV/HCV tumors was highly similar. The tumor suppressor protein p53 regulates lipid metabolism. The p53 and p53S392 protein levels were induced in the tumors of HBV, HCV and double infected patients, and this was significant in HBV infection. Negative correlation of tumor p53 protein with free cholesterol indicates a role of p53 in cholesterol metabolism. In summary, the current study suggests that therapeutic strategies to target lipid metabolism in chronic viral hepatitis and associated cancers have to consider disease etiology. 相似文献