Dynex: multiplex ELISA technology

Conventional enzyme-linked immunosorbent assay (ELISA) is a gold standard for screening antibodies and testing for protein or antigen presence. A significant limitation of this assay resides in the fact that only one analyte can be assessed per microplate well. Here, we describe and investigate a new technology consisting of an automated ELISA system in which up to 10 analytes can be measured within one single well, thus improving productivity, accuracy, and repeatability by reducing the amount of human labor required. Another strength of the platform is that a user can load any necessary sets/subsets of beads to perform required assays, with improved flexibility compared to manufactured-loaded arrays for multiplex analysis. We also demonstrate that this system can be used to determine the pathogenicity (i.e., presence of Shiga toxins) and serotype (i.e., Escherichia coli O157) of E. coli isolates.     

High nutrient loading and climatic parameters influence the dominance and dissimilarity of toxigenic cyanobacteria in northern bays of Lake Victoria

Eutrophication of Lake Victoria led to changes in its phytoplankton communities. However, different levels of eutrophication exist in the open lake and the bays, and between embayments. This study utilized spatial and temporal sampling of Napoleon Gulf and Murchison Bay, exhibiting different trophic conditions. Over one year, we investigated phytoplankton biomass, richness, diversity and dissimilarity, and related the dynamics of the dominant species to the limnological and climatic conditions. The results confirmed that Napoleon Gulf and Murchison Bay showed large differences in eutrophication status, with lower nutrient concentrations in Napoleon Gulf than in Murchison Bay, where a strong gradient was observed from inshore to offshore areas. These nutrient dynamics resulted in a 4 to 10 fold higher chlorophyll-a in Murchison Bay than in Napoleon Gulf. From the embayments, 135 phytoplankton taxa were recorded with no significant differences in alpha diversity. However, high dissimilarity in community structure was observed in beta diversity, mostly due to a turnover among the dominant toxigenic species. Thus, from a similar species pool, there was a shift in the dominant toxigenic cyanobacteria from Microcystis flos-aquae and M. aeruginosa in Murchison Bay, Dolichospermum circinale and Planktolyngbya circumcreta in Napoleon Gulf to D. circinale in the offshore stations. These cyanobacteria are toxigenic taxa with known health hazards. Using partial least square models, we showed that both climatic variables (e.g. wind, solar radiation) and levels of inorganic dissolved nutrients (e.g. SRP, NO₃^–, and NH₄⁺) are the main drivers of differences and dominance in cyanobacteria communities in northern Lake Victoria.     

Active symbols and internal models: Towards a cognitive connectionism

In the first section of the article, we examine some recent criticisms of the connectionist enterprise: first, that connectionist models are fundamentally behaviorist in nature (and, therefore, non-cognitive), and second that connectionist models are fundamentally associationist in nature (and, therefore, cognitively weak). We argue that, for a limited class of connectionist models (feed-forward, pattern-associator models), the first criticism is unavoidable. With respect to the second criticism, we propose that connectionist modelsare fundamentally associationist but that this is appropriate for building models of human cognition. However, we do accept the point that there are cognitive capacities for which any purely associative model cannot provide a satisfactory account. The implication that we draw from is this is not that associationist models and mechanisms should be scrapped, but rather that they should be enhanced.In the next section of the article, we identify a set of connectionist approaches which are characterized by active symbols — recurrent circuits which are the basis of knowledge representation. We claim that such approaches avoid criticisms of behaviorism and are, in principle, capable of supporting full cognition. In the final section of the article, we speculate at some length about what we believe would be the characteristics of a fully realized active symbol system. This includes both potential problems and possible solutions (for example, mechanisms needed to control activity in a complex recurrent network) as well as the promise of such systems (in particular, the emergence of knowledge structures which would constitute genuine internal models).     

Adding sense to the Internet of Things

The Internet of Things (IoT) concept is being widely presented as the next revolution toward massively distributed information, where any real-world object can automatically participate in the Internet and thus be globally discovered and queried. Despite the consensus on the great potential of the concept and the significant progress in a number of enabling technologies, there is a general lack of an integrated vision on how to realize it. This paper examines the technologies that will be fundamental for realizing the IoT and proposes an architecture that integrates them into a single platform. The architecture introduces the use of the Smart Object framework to encapsulate radio-frequency identification (RFID), sensor technologies, embedded object logic, object ad-hoc networking, and Internet-based information infrastructure. We evaluate the architecture against a number of energy-based performance measures, and also show that it outperforms existing industry standards in metrics such as network throughput, delivery ratio, or routing distance. Finally, we demonstrate the feasibility and flexibility of the architecture by detailing an implementation using Wireless Sensor Networks and Web Services, and describe a prototype for the real-time monitoring of goods flowing through a supply chain.     

Posterior representation with a multi‐modal likelihood using the gaussian sum filter for localization in a known map

A Gaussian sum filter (GSF) with component extended Kalman filters (EKF) is proposed as an approach to localizing an autonomous vehicle in an urban environment with limited GPS availability. The GSF uses vehicle‐relative vision‐based measurements of known map features coupled with inertial navigation solutions to accomplish localization in the absence of GPS. The vision‐based measurements have multimodal measurement likelihood functions that are well represented as weighted sums of Gaussian densities. The GSF is used because of its ability to represent the posterior distribution of the vehicle pose with better efficiency (fewer terms, less computational complexity) than a corresponding bootstrap particle filter with various numbers of particles because of the interaction with measurement hypothesis tests. The expectation‐maximization algorithm is used off line to determine the representational efficiency of the particle filter in terms of an effective number of Gaussian densities. In comparison, the GSF, which uses an iterative condensation procedure after each iteration of the filter to maintain real‐time capabilities, is shown through a series of in‐depth empirical studies to more accurately maintain a representation of the posterior distribution than the particle filter using 37 min of recorded data from Cornell University's autonomous vehicle driven in an urban environment, including a 32 min GPS blackout. © 2012 Wiley Periodicals, Inc.     

Annotation of sentence structure

The focus of this article is on the creation of a collection of sentences manually annotated with respect to their sentence structure. We show that the concept of linear segments—linguistically motivated units, which may be easily detected automatically—serves as a good basis for the identification of clauses in Czech. The segment annotation captures such relationships as subordination, coordination, apposition and parenthesis; based on segmentation charts, individual clauses forming a complex sentence are identified. The annotation of a sentence structure enriches a dependency-based framework with explicit syntactic information on relations among complex units like clauses. We have gathered a collection of 3,444 sentences from the Prague Dependency Treebank, which were annotated with respect to their sentence structure (these sentences comprise 10,746 segments forming 6,341 clauses). The main purpose of the project is to gain a development data—promising results for Czech NLP tools (as a dependency parser or a machine translation system for related languages) that adopt an idea of clause segmentation have been already reported. The collection of sentences with annotated sentence structure provides the possibility of further improvement of such tools.     

The quantum dynamic capacity formula of a quantum channel

The dynamic capacity theorem characterizes the reliable communication rates of a quantum channel when combined with the noiseless resources of classical communication, quantum communication, and entanglement. In prior work, we proved the converse part of this theorem by making contact with many previous results in the quantum Shannon theory literature. In this work, we prove the theorem with an ??ab initio?? approach, using only the most basic tools in the quantum information theorist??s toolkit: the Alicki-Fannes?? inequality, the chain rule for quantum mutual information, elementary properties of quantum entropy, and the quantum data processing inequality. The result is a simplified proof of the theorem that should be more accessible to those unfamiliar with the quantum Shannon theory literature. We also demonstrate that the ??quantum dynamic capacity formula?? characterizes the Pareto optimal trade-off surface for the full dynamic capacity region. Additivity of this formula reduces the computation of the trade-off surface to a tractable, textbook problem in Pareto trade-off analysis, and we prove that its additivity holds for the quantum Hadamard channels and the quantum erasure channel. We then determine exact expressions for and plot the dynamic capacity region of the quantum dephasing channel, an example from the Hadamard class, and the quantum erasure channel.     

Gas atomization of cobalt ferrite-phosphate melts

A rapidly solidified (Co, Fe)₃O₄ spinel was formed in a cobalt-iron-phosphate glass matrix by gas atomization of melts of composition 37.5% mol % CoO, 37.5%Fe₂O₃, 25% P₂O₅; and 40% CoO, 40% Fe₂O₃, 20% P₂O₅, and the material has been characterized using size analysis, X-ray diffraction, Mössbauer spectroscopy, and scanning electron microscopy with energy dispersive X-ray spectroscopy.In the 20 mol % P₂O₅ composition, atomized powder 50–100m in diameter contained 33 wt % (Co, Fe)₃O₄. The ferrite crystallized as randomly oriented, faceted dendrites parallel to 100, and the growth was apparently diffusion controlled. Unlike the ferrite, where iron is in both tetrahedral and octahedral coordination, the iron in the glassy matrix was predominantly in distorted octahedral coordination. Overall particle size distributions were broad (15–700m), with 50 wt % smaller than 200m. The maximum in the size distribution shifted from 150 to 80m on increasing the atomizing pressure from 7 to 20 bar (100 to 300 psi). Calculations have shown that the cooling rates obtained with oxide melts vary strongly with droplet size, and less strongly with melt temperature.     

Null values in nested relational databases

Summary The desire to extend the applicability of the relational model beyond traditional data-processing applications has stimulated interest in nested or non-first normal form relations in which the attributes of a relation can take on values which are sets or even relations themselves. In this paper, we study the role of null values in the nested relational model using an open world assumption. We extend the traditional theory and study the properties of extended operators for nested relations containing nulls. The no-information, unknown, and non-existent interpretation of nulls are discussed and the meaning of empty set is clarified. Finally, contrary to several previous results, we determine that the traditional axiomatization of functional and multivalued dependencies is valid in the presence of nulls.Currently with the Air Force Institute of Technology, AFIT/ENG, Wright-Patterson AFB, OH 45433, USAResearch partially supported by an IBM Faculty Development A ward and NSF grant DCR-8507224     

Van der Pauw measurement of metal fibre orientation in a plastic-metal composite

Stainless steel fibres in ABS plastic form a composite with an anisotropic resistivity. Samples are rectangular shapes with uniform thickness. By assuming two principal resistivities and by using van der Pauw's technique, we find ² = _{x y} . For rectangular samples, field theory determines _y / _x and hence fibre direction. Results for three sample geometries agree with the theoretical predictions of the fibre patterns and with X-ray data. Samples formed by a centre-sprue feed are the best for fabricating large, uniform samples, while samples with a large length-to-width ratio have the most uniform metal density and fibre orientation. Resistivity was also measured by the more-common two-probe technique. Results correlate well to van der Pauw data, with 95% confidence.