Automatic diatom identification using contour analysis by morphological curvature scale spaces

A method for automatic identification of diatoms (single-celled algae with silica shells) based on extraction of features on the contour of the cells by multi-scale mathematical morphology is presented. After extracting the contour of the cell, it is smoothed adaptively, encoded using Freeman chain code, and converted into a curvature representation which is invariant under translation and scale change. A curvature scale space is built from these data, and the most important features are extracted from it by unsupervised cluster analysis. The resulting pattern vectors, which are also rotation-invariant, provide the input for automatic identification of diatoms by decision trees and k-nearest neighbor classifiers. The method is tested on two large sets of diatom images. The techniques used are applicable to other shapes besides diatoms. Andrei C. Jalba received his B.Sc. (1998) and M.Sc. (1999) in Applied Electronics and Information Engineering from “Politehnica” University of Bucharest, Romania. He recently obtained a Ph.D. degree at the Institute for Mathematics and Computing Science of the University of Groningen, where he now is a postdoctoral researcher. His research interests include computer vision, pattern recognition, image processing, and parallel computing. Michael Wilkinson obtained an M.Sc. in astronomy from the Kapteyn Laboratory, University of Groningen (RuG) in 1993, after which he worked on image analysis of intestinal bacteria at the Department of Medical Microbiology, RuG. This work formed the basis of his Ph.D. at the Institute of Mathematics and Computing Science (IWI), RuG, in 1995. He was appointed as researcher at the Centre for High Performance Computing (also RuG) working on simulating the intestinal microbial ecosystem on parallel computers. During that time he edited the book “Digital Image Analysis of Microbes” (John Wiley, UK, 1998) together with Frits Schut. After this he worked as a researcher at the IWI on image analysis of diatoms. He is currently assistant professor at the IWI. Jos B.T.M. Roerdink received his M.Sc. (1979) in theoretical physics from the University of Nijmegen, the Netherlands. Following his Ph.D. (1983) from the University of Utrecht and a 2-year position (1983--1985) as a Postdoctoral Fellow at the University of California, San Diego, both in the area of stochastic processes, he joined the Centre for Mathematics and Computer Science in Amsterdam. There he worked from 1986-1992 on image processing and tomographic reconstruction. He was appointed associate professor (1992) and full professor (2003), respectively, at the Institute for Mathematics and Computing Science of the University of Groningen, where he currently holds a chair in Scientific Visualization and Computer Graphics. His current research interests include biomedical visualization, neuroimaging and bioinformatics. Micha Bayer graduated from St. Andrews University, Scotland, with an M.Sc. in Marine Biology in 1994. He obtained his Ph.D. in Marine Biology from there in 1998, and then followed this up with two postdoctoral positions at the Royal Botanic Garden Edinburgh, Scotland, first on the ADIAC and then on the DIADIST project. In both of these projects he was responsible for establishing the collections of diatom training data to be used for the pattern recognition systems. From 2002–2003 he was enrolled for an M.Sc. in information technology at the University of Glasgow, Scotland, and is now working as a grid developer at the National e-Science Centre at Glasgow University. Stephen Juggins is a senior lecturer at the School of Geography, Politics and Sociology, University of Newcastle. His research focuses on the use of diatoms for monitoring environmental change and on the analysis of ecological and palaeoecological data. He has worked in Europe, North America and Central Asia on problems of river water quality, historical lake acidification, coastal eutrophication and Quaternary climate change.     

A model of non‐isothermal degradation of nutrients,pigments and enzymes

Published isothermal degradation curves for chlorophyll A and thiamine in the range 100–150 °C and the inactivation curves of polyphenol oxidase (PPO) in the range 50–80 °C could be described by the model C(t)/C₀ = exp[?b(T)tⁿ] where C(t) and C₀ are the momentary and initial concentrations, respectively, b(T) a temperature dependent ‘rate parameter’ and n, a constant. This suggested that the temporal degradation/inactivation events of all three had a Weibull distribution with a practically constant shape factor. The temperature dependence of the ‘rate parameter’ could be described by the log logistic model, b(T) = log_e[1 + exp[k(T ? T_c)], where T_c is a marker of the temperature level where the degradation/inactivation occurs at a significant rate and k the steepness of the b(T) increase once this temperature range has been exceeded. These two models were combined to produce a non‐isothermal degradation/inactivation model, similar to one recently developed for microbial inactivation. It is based on the assumption that the local slope of the non‐isothermal decay curve, ie the momentary decay rate, is the slope of the isothermal curve at the momentary temperature at a time that corresponds to the momentary concentration of the still intact or active molecules. This model, in the form of a differential equation, was solved numerically to produce degradation/inactivation curves under temperature profiles that included heating and cooling and oscillating temperatures. Such simulations can be used to assess the impact of planned commercial heat processes on the stability of compounds of nutritional and quality concerns and the efficacy of methods to inactivate enzymes. Simulated decay curves on which a random noise was superimposed were used to demonstrate that the degradation/inactivation parameters, k and T_c, can be calculated directly from non‐isothermal decay curves, provided that the validity of the Weibullian and log logistic models and the constancy of the shape factor n could be assumed. Copyright © 2004 Society of Chemical Industry     

The Activation of a Pd/γ-alumina Catalyst During Methane Combustion: Investigation of the Phenomenon and of Potential Causes

Activation phenomena of a Pd/γ-Al₂O₃ catalyst under methane combustion reaction conditions were studied. The activation of the catalyst with time-on-stream is not due to Cl removal from the surface but seems to be related to sintering of the palladium particles. This could induce structural changes in the palladium particle, which would favor the activation of O₂ on the surface of PdO.     

Implicit induction in conditional theories

We propose a new procedure for proof by induction in conditional theories where case analysis is simulated by term rewriting. This technique reduces considerably the number of variables of a conjecture to be considered for applying induction schemes. Our procedure is presented as a set of inference rules whose correctness has been formally proved. Moreover, when the axioms are ground convergent and the functions are completely defined, it is possible to apply the system for refuting conjectures. The procedure is even refutationally complete for conditional equations with Boolean preconditions over free constructors. The method is entirely implemented in the proverSPIKE. This system has solved interesting problems in a completely automatic way, that is, without interaction with the user and without ad hoc heuristics. It has also proved the challenging Gilbreath card trick, with only two easy lemmas.Preliminary versions of the results have been presented at the 13th International Joint Conference on Artificial Intelligence, Chambéry (France), 1993 (Bouhoula and Rusinowith, 1993).     

Biofunctionalized upconverting CaF<Subscript>2</Subscript>:Yb,Tm nanoparticles for <Emphasis Type="Italic">Candida albicans</Emphasis> detection and imaging

Versatile optimization of the synthesis method and composition of Yb3+ and Tm3+ co-doped CaF2 nanoparticles as well as a novel biofunctionalization method were developed and evaluated.Through multistep synthesis,the luminescence intensity of the Tm3+ activator was enhanced by more than 10-fold compared to standard one-step synthesis.The proposed methods were used to homogenously distribute the doping ions within the nanoparticle's volume and thus reduce luminescence quenching.Optimization of dopant ions concentration led to the selection of the most efficient visible and near-infrared up-converting nanoparticles,which were CaF2 doped with 10％ Yb3+ 0.05％ Tm3+ and 20％ Yb3+ 0.5％ Tm3+,respectively.To illustrate the suitability of the synthesized nanoparticles as bio-labels,a dedicated biofunctionalization method was used,and the nanoparticles were applied for labeling and imaging of Candida albicans cells.This method shows great promise because of extremely low background and high specificity because of the presence of the attached molecules.     

Tribological Properties of the Oxide Coatings Produced onto 6061-T6 Aluminum Alloy in the Hard Anodizing Process

The aim of this work was to establish the influence of the thickness of the anodic coatings on their mechanical properties and to understand the relation between their hardness and the abrasion resistance. The coatings were produced in the hard anodizing process onto the 6061-T6 aluminum alloy. Their thickness was in the range between 19 and 43 µm. The abrasion resistance was determined by using Taber abrasion test. The weight losses of the coatings obtained were in the range between 15 and 11 mg and decreased with their increasing thickness. It has been shown that the hardness measured on the cross sections of the coatings did not correspond to their abrasion resistance. Thus, the new approach has been proposed. The hardness of the coatings was estimated on the basis of the results of the scratch test performed at the constant load. The results obtained correspond to the abrasion resistance of the coatings.     

Wetting Behavior and Reactivity of Molten Silicon with h-BN Substrate at Ultrahigh Temperatures up to 1750 °C

For a successful implementation of newly proposed silicon-based latent heat thermal energy storage systems, proper ceramic materials that could withstand a contact heating with molten silicon at temperatures much higher than its melting point need to be developed. In this regard, a non-wetting behavior and low reactivity are the main criteria determining the applicability of ceramic as a potential crucible material for long-term ultrahigh temperature contact with molten silicon. In this work, the wetting of hexagonal boron nitride (h-BN) by molten silicon was examined for the first time at temperatures up to 1750 °C. For this purpose, the sessile drop technique combined with contact heating procedure under static argon was used. The reactivity in Si/h-BN system under proposed conditions was evaluated by SEM/EDS examinations of the solidified couple. It was demonstrated that increase in temperature improves wetting, and consequently, non-wetting-to-wetting transition takes place at around 1650 °C. The contact angle of 90° ± 5° is maintained at temperatures up to 1750 °C. The results of structural characterization supported by a thermodynamic modeling indicate that the wetting behavior of the Si/h-BN couple during heating to and cooling from ultrahigh temperature of 1750 °C is mainly controlled by the substrate dissolution/reprecipitation mechanism.     

Drying of Herbal Product in Closed System

A new product from a low temperature drying method that reduces the loss of highly volatile essential oils is presented. The proposed drying method consists of evaporation/sublimation of water and aromatic substances in a dryer with a closed drying agent cycle. In parallel, the evaporated compounds are continuously condensed in a heat exchanger. As a result of the drying process, high-quality dried plants and Fluidolat as liquid phase containing water and volatile organic compounds are obtained. The aim of presented investigations was to optimize the developed technology for the herb lavender.