Importance and reduction of the sidewall-induced band-broadening effect in pressure-driven microfabricated columns

The influence of the detailed design of the sidewall region upon the over-all band-broadening in microfabricated packed-bed or collocated monolithic support structure (COMOSS) columns has been investigated using computational fluid dynamics (CFD) simulation techniques. It is shown that, under unretained solute conditions, very small structural variations of the order of only 5% of the particle diameter can give rise to a 4-fold increase of the band-broadening. A comprehensive study has been made to quantify this effect as a function of the fluid velocity, the particle diameter, the channel widths, and of course, the sidewall region design. Because the sidewall effect can be fully attributed to a mismatch between the flow rates in the column center and in the sidewall region, it is fortunately also quite straightforward to avoid it. A very simple design, yielding band-broadening values identical to that of a hypothetical sidewall-less column for all possible values of the flow velocity, the particle diameter, or the channel width is proposed.     

Patterning and predicting aquatic macroinvertebrate diversities using artificial neural network

A counterpropagation neural network (CPN) was applied to predict species richness (SR) and Shannon diversity index (SH) of benthic macroinvertebrate communities using 34 environmental variables. The data were collected at 664 sites at 23 different water types such as springs, streams, rivers, canals, ditches, lakes, and pools in The Netherlands. By training the CPN, the sampling sites were classified into five groups and the classification was mainly related to pollution status and habitat type of the sampling sites. By visualizing environmental variables and diversity indices on the map of the trained model, the relationships between variables were evaluated. The trained CPN serves as a 'look-up table' for finding the corresponding values between environmental variables and community indices. The output of the model fitted SH and SR well showing a high accuracy of the prediction (r>0.90 and 0.67 for learning and testing process, respectively) for both SH and SR. Finally, the results of this study, which uses the capability of the CPN for patterning and predicting ecological data, suggest that the CPN can be effectively used as a tool for assessing ecological status and predicting water quality of target ecosystems.     

Need for recovery from work: evaluating short-term effects of working hours,patterns and schedules

In this paper working hours, patterns and work schedules of employees were evaluated in terms of need for recovery from work. Self-administered questionnaire data from employees of the Maastricht Cohort Study on Fatigue at Work (n = 12,095) were used. Poisson regression analyses and multivariate logistic regression analyses revealed that higher working hours a day and working hours a week generally went together with more need for recovery from work. Overtime work was particularly associated with higher need for recovery from work in both genders. Both male and female three-shift or irregular shift workers had higher odds of elevated need for recovery compared to day workers. When additionally controlling for work-related factors, need for recovery levels among shift workers substantially lowered. This study clearly showed that working hours and schedules are associated with need for recovery from work, with different associations for men and women. Especially the associations between work schedules and need for recovery from work were very interrelated with other work-related factors. Future studies could further investigate the possibility that shift work might function as a proxy of other work-related factors that explain the different levels in need for recovery from work, or that job demands are perceived higher among shift workers and may therefore lead to more need for recovery from work.     

Dynamics of reaching for stationary and moving objects: Data and model.

The nature of the interrelations among movement amplitude, movement time, and peak velocity was addressed in 2 experiments in which participants reached for stationary and moving objects. Movement time was found to scale with the distance between the hand and the object at the onset of movement but to be relatively independent of object speed. Peak velocity, however, was found to scale with both these variables. The origin of these interrelations cannot be understood within the framework of existing trajectory formation models that are based on optimization procedures. A dynamical perspective in which the movements are considered in an object-attached coordinate frame allows for their emergence. This is demonstrated by simulation of a nonlinear model, built up from Rayleigh and Duffing components, with the nonlinear dissipative parameter being associated with amplitude scaling. (PsycINFO Database Record (c) 2010 APA, all rights reserved)     

Firm relocation decisions in The Netherlands: An ordered logit approach

This article explores the determinants of firm migration in The Netherlands. First, based on the existing literature a theoretical framework is developed. Second, based on aggregate data firm relocation processes in The Netherlands are discussed in terms of numbers, sectoral composition, origins and destinations (regions), distance moved and employments effects. In the third part a formal model will be tested using individual data of firms. The relocation decisions of individual firms will be related to firm and location characteristics by means of an ordered logit model. The results indicate that the decision to relocate is mainly determined by firm internal factors and to a lesser extent by site related factors. Received 1 July 1999 / Accepted 28 November 1999     

Structure Determination of the Top‐Loop of the Conserved 3′‐Terminal Secondary Structure in the Genome of Flaviviruses

To what extent small differences in RNA sequences (mutations) can have a profound impact on biology remains an intriguing question. This effect can be studied by using untranslated RNA regions as a model. We have studied the influence of mutations on the structure of an RNA hairpin that occurs in the 3′‐untranslated region (UTR) of Flaviviridae, and is known to have a large impact on the vector dependency of flaviviruses. Three related RNA sequences were studied by NMR spectroscopy. The selected sequences represent each one of the three clusters in the flavivirus genes (mosquito‐borne, tick‐borne, and no‐known‐vector viruses). A new strategy was used to obtain chemical shift signatures of carbonyl atoms in unlabeled uridine nucleobases to characterize their involvement in hydrogen bonding. Clear differences occur in the structures and stacking pattern of the three RNA hairpins. The observed differences cannot be predicted based on sequence analysis. A different biology can be correlated with a different RNA tertiary structure. The underlying biological mechanism, however, remains to be studied.     

Film Thickness of Mechanically Worked Lubricating Grease at Very Low Speeds

Several different types of commercially available greases, aged in a roll stability tester, have been tested in a ball-on-disc machine where the film thickness was measured using the interferometry method. The grease film thickness at very low speed is thicker than the base oil film thickness due to the contribution of the thickener in this regime, which practically vanishes at higher speeds. The (mechanical) aging process reduces the thickener material, decreasing the grease film thickness at very low speeds (entrainment speed less than 0.01 m/s) with aging time, whereas no significant difference was found at higher speeds where the grease film thickness still approached the calculated base oil film thickness.     

Discovery of an Acyclic Nucleoside Phosphonate that Inhibits Mycobacterium tuberculosis ThyX Based on the Binding Mode of a 5‐Alkynyl Substrate Analogue

The urgent need for new antibiotics poses a challenge to target un(der)exploited vital cellular processes. Thymidylate biosynthesis is one such process due to its crucial role in DNA replication and repair. Thymidylate synthases (TS) catalyze a crucial step in the biosynthesis of thymidine 5‐triphosphate (TTP), an elementary building block required for DNA synthesis and repair. To date, TS inhibitors have only been successfully applied in anticancer therapy due to their lack of specificity for antimicrobial versus human enzymes. However, the discovery of a new family of TS enzymes (ThyX) in a range of pathogenic bacteria that is structurally and biochemically different from the “classic” TS (ThyA) has opened the possibility to develop selective ThyX inhibitors as potent antimicrobial drugs. Here, the interaction of the known inhibitor 5‐(3‐octanamidoprop‐1yn‐1yl)‐2′‐deoxyuridine‐5′‐monophosphate ( 1 ) with Mycobacterium tuberculosis ThyX enzyme is explored using molecular modeling starting from published crystal structures, with further confirmation through NMR experiments. While the deoxyuridylate (dUMP) moiety of compound 1 occupies the cavity of the natural substrate in ThyX, the rest of the ligand (the “5‐alkynyl tail”) extends to the outside of the enzyme between two of its four subunits. The hydrophobic pocket that accommodates the alkyl part of the tail is formed by displacement of Tyr 44.C, Tyr 108.A and Lys 165.A. Changes to the resonance of the Lys 165 NH₃ group upon ligand binding were monitored in a titration experiment by 2D HISQC NMR. Guided by the results of the modeling and NMR studies, and inspired by the success of acyclic antiviral nucleosides, compounds where a 5‐alkynyl uracyl moiety is coupled to an acyclic nucleoside phosphonate (ANP) were synthesized and evaluated. Of the compounds evaluated, sodium (6‐(5‐(3‐octanamidoprop‐1‐yn‐1‐yl)‐2,4‐dioxo‐3,4‐dihydropyrimidin‐1(2H)‐yl)hexyl)phosphonate ( 3 e ) exhibited 43 % of inhibitory effect on ThyX at 50 μM . While only modest activity was achieved, this is the first example of an ANP inhibiting ThyX, and these results can be used to further guide structural modifications to this class to develop more potent compounds with potential application as antibacterial agents acting through a novel mechanism of action.     

On the relationship between travel time and travel distance of commuters

This paper gives a detailed empirical analysis of the relationships between different indicators of costs of commuting trips by car: difference as the crow flies, shortest travel time according to route planner, corresponding travel distance, and reported travel time. Reported travel times are usually rounded in multiples of five minutes. This calls for special statistical techniques. Ignoring the phenomenon of rounding leads to biased estimation results for shorter distances. Rather surprisingly, the distance as the crow flies and the network distance appear to be slightly better proxies of the reported travel time compared with the shortest network travel time as indicated by the route planner. We conclude that where actual driving times are missing in commuting research the other three indicators mentioned may be used as proxies, but that the following problems may emerge: actual travel times may be considerably higher than network times generated by route planners, and the average speed of trips increases considerably with distance, implying an overestimate of travel time for long distance commuters. The only personal feature that contributes significantly to variations in reported travel times is gender: women appear to drive at lower average speeds according to our data. As indicated in the paper this may be explained by the differences in the car types of male and female drivers (females drive older and smaller cars) as well as higher numbers of stops/trip chaining among women. A concise analysis is carried out for carpoolers. Car-pooling leads to an increase in travel time of some 17% compared with solo drivers covering the same distance. In the case of car poolers, the above mentioned measures appear to be very poor proxies for the actual commuting times. Received: November 1996/Accepted: January 1998