The Proteomics Big Challenge for Biomarkers and New Drug-Targets Discovery

In the modern process of drug discovery, clinical, functional and chemical proteomics can converge and integrate synergies. Functional proteomics explores and elucidates the components of pathways and their interactions which, when deregulated, lead to a disease condition. This knowledge allows the design of strategies to target multiple pathways with combinations of pathway-specific drugs, which might increase chances of success and reduce the occurrence of drug resistance. Chemical proteomics, by analyzing the drug interactome, strongly contributes to accelerate the process of new druggable targets discovery. In the research area of clinical proteomics, proteome and peptidome mass spectrometry-profiling of human bodily fluid (plasma, serum, urine and so on), as well as of tissue and of cells, represents a promising tool for novel biomarker and eventually new druggable targets discovery. In the present review we provide a survey of current strategies of functional, chemical and clinical proteomics. Major issues will be presented for proteomic technologies used for the discovery of biomarkers for early disease diagnosis and identification of new drug targets.     

Synthesis and analysis of phase segregation of polystyrene-block-poly(methyl methacrylate) copolymer obtained by Steglich esterification from semitelechelic blocks of polystyrene and poly(methyl methacrylate)

Here, an alternative route to successfully synthesize polystyrene-block-poly(methyl methacrylate) (PS-b-PMMA) is reported. Steglich esterification was used as an effective, metal free approach for coupling carboxylic terminated PS and the hydroxyl end-functionalized PMMA chains obtained by nitroxide-mediated polymerization and atom transfer radical polymerization, respectively. α-Functionalization was obtained using 4,4′-azobis(4-cyanovaleric acid) and 2,2,2-tribromoethanol as initiators. The synthesis of PS-b-PMMA was confirmed by gel permeation chromatography and nuclear magnetic resonance (NMR), while the dependence of the diffusion coefficients of the polymers (PS, PMMA, PS/PMMA blend, and PS-b-PMMA) with their corresponding molecular weights was discussed based on the results of atomic force microscopy-based infrared spectroscopy, differential scanning calorimetry, and spectra of diffusion-ordered NMR spectroscopy. Differently from PS-b-PMMA, a partial segregation was observed for the PS/PMMA blend, affecting its thermal behavior and diffusion coefficient. The study here presented provides an easier and efficient strategy for the synthesis of PS-b-PMMA and new insights into the diffusion of polymers.     

Incorporation of postconsumer polyurethane foam into a polymer/clay aerogel matrix

The feasibility of incorporating ground recycled polyurethane (PU) foam into clay/polymer aerogels was demonstrated, and a range of compositions were prepared and characterized to determine the effect of variation in the formulations on density and mechanical properties of the resulting materials. This study followed a modified combinatorial approach. Initially, experiments were performed in water using either sodium exchanged montmorillonite or laponite clay, poly(vinyl alcohol) (PVOH) solution as the polymer binder, and the recycled PU foam. Freezing and freeze‐drying the aqueous gels produced aerogels, which were characterized through density and mechanical testing, scanning electron microscopy, and thermal gravimetric analysis. The study was expanded by exploring alternative binder chemistries, including the use of an alginate polymer in place of the PVOH or adding a polyisocyanate as a crosslinking agent for PVOH. The effect of recycled PU foam content, clay type and level, and binder type and level on the mechanical properties of the aerogels were determined and will be discussed herein. © 2015 Wiley Periodicals, Inc. J. Appl. Polym. Sci. 2015 , 132, 42586.     

Cover Image,Volume 66, Issue 10

The cover image, by Bruna A. Bregadiolli et al., is based on the Research Article Towards the synthesis of poly(azafulleroid)s: main chain fullerene oligomers for organic photovoltaic devices, DOI: 10.1002/pi.5419 .

     

Application of the Theory of Critical Distances to predict the effect of induced and process inherent defects for SLM Ti-6Al-4V in high cycle fatigue

Additive manufacturing techniques such as selective laser melting enable the production of customised components with high geometrical freedom. However, SLM results in a material condition with different properties to their conventionally manufactured counterparts. The presence of process-inherent defects can significantly impact the degradation of part performance. Hereby, a novel approach to assessing notched SLM Ti-6Al-4V material via a critical distance theory is presented. Geometrical notches of varying size are evaluated. Results show that the Theory of Critical Distances is appropriately applicable to fatigue prediction of SLM Ti-6Al-4V in its as-built state.     

19-Azasqualene-2,3-epoxide and its N-oxide: Metabolic fate and inhibitory effect on sterol biosynthesis in Saccharomyces cerevisiae

19-Azasqualene-2,3-epoxide was more inhibitory than the corresponding N-oxide against 2,3-oxidosqualene cyclase (OSC) solubilized from Saccharomyces cerevisiae (IC₅₀ 7±2 and 25±5 μM, respectively). Both compounds showed a reversible, noncompetitive-type inhibition on solubilized OSC. Different inhibitory properties between the compounds were especially evident when measuring [¹⁴C]acetate incorporation into nonsaponifiable lipids extracted from treated cells. In cells treated with 19-azasqualene-2,3-epoxide at 30 μM, the radioactivity associated with the oxidosqualene fraction, which was negligible in the controls, rose to over 40% of the nonsaponifiable lipids, whereas it remained at a slightly appreciable level in cells treated with the N-oxide derivative under the same conditions. 19-Azasqualene-2,3-epoxide was also more effective than the N-oxide as a cell growth inhibitor (minimal concentration of compound needed to inhibit yeast growth: 45 and >100 μM, respectively). The two inhibitors underwent different metabolic fates in the yeast: while 19-azasqualene-2,3-epoxide did not undergo any transformation, its N-oxide was actively reduced to the corresponding amine in whole and in “ultrasonically stimulated” cells. The N-oxide reductases responsible for this transformation appear to be largely confined within the microsomal fractions and require NADPH for their activity. A possible relationship between the inhibitory properties of the two compounds and their metabolic fates is discussed.     

Polymer electrolytes based on a ternary miscible blend of poly(ethylene oxide), poly(bisphenol A-co-epichlorohydrin) and poly(vinyl ethyl ether)

Ternary blends of poly(ethylene oxide) (PEO), poly(bisphenol A-co-epichlorohydrin) (PBE) and poly(vinyl ethyl ether) (PVEE) were obtained as films and characterized by differential scanning calorimetry (DSC) and vibrational spectroscopy (FTIR). From the DSC results, phase diagrams for the ternary blends were determined, where the variation of the viscoelastic phase extent as a function of the polymers composition was determined. The DSC results also indicated miscibility of the system, exhibiting only one glass transition temperature (T_g) and decrease in the crystallinity of the system, as well as decrease in the crystallinity of PEO present in the blends. Vibrational spectroscopy (FTIR) provided information on the intermolecular interactions between the pairs PBE/PEO and PBE/PVEE, via hydrogen bond interaction. From the FTIR analyses, molecular model systems of equilibrium among the interacting structures were proposed as a molecular basis for the miscibility of the system.Polymer electrolytes based on the ternary blend containing 60/25/15 (PEO/PBE/PVEE) mass percent and lithium perchlorate (LiClO₄) were obtained and characterized by DSC, FTIR, optical microscopy and electrochemical impedance spectroscopy (EIS). Solid electrolytes containing up to 10 wt% LiClO₄ exhibited a single-phase behavior, evidenced by the DSC results. For these electrolytes, FTIR spectra indicated the formation of polymer-ion complexes, in which the cation (Li⁺) acts favoring the polymer-polymer miscibility. Electrolytes containing LiClO₄ higher than 10 wt% exhibit a multiple phase behavior, in which a PEO-rich, salt-containing phase is present in equilibrium with PBE or PVEE-rich phases. Maximum ionic conductivity at room temperature, for the electrolyte containing 20 wt% LiClO₄, reached 4.23 × 10⁻³ Ω⁻¹ cm⁻¹, while all samples exhibited conductivity of approximately 10⁻¹ Ω⁻¹ cm⁻¹ at 80 °C.     

Influence of yeast strain on ochratoxin A content during fermentation of white and red must

The aim of this work was to examine whether the yeast strains, responsible for alcoholic fermentation, have an influence on the concentration of ochratoxin A (OTA) in wine. Before the fermentation, OTA was added to musts up to a concentration of about 2 microg/l. OTA content was determined in white and red wines resulting from respective musts and in methanolic extract of the yeast lees (MEL). Data showed a significant reduction of OTA at the end of alcoholic fermentation. However, depending on the yeast strain involved in the fermentation, there was a difference in the content of OTA in the wines. The percentage of OTA removal during the fermentation was between 46.83% and 52.16% in white wine and between 53.21% and 70.13% in red wine. The absence of degradation products suggested an adsorption mechanism. OTA concentration in MEL resulting from red must fermentation was higher than in white. A significant amount of OTA was not recovered either from wine or from MEL.     

Impact Fracture of Thermally Tempered Glass Helicopter Windshields

In-service fracture of helicopter windshields was studied. Simulated catastrophic fracture tests were conducted by firing alumina and steel spheres onto stationary tempered and as-received glass panels. The results were studied by Hertzian analysis and modified Auerbach's relations. Thermally tempered glass shows much higher impact resistance than that estimated from superposition of residual stresses. Subcritical impact sites exhibit slow crack growth in tempered plates, eventually leading to fracture of the entire plate.