Phytochemical composition and antioxidant capacity of various botanical parts of the fruits of Prunus × domestica L. from the Lorraine region of Europe

Mirabelle plums represent a famous fruit from the Lorraine region, however little is known about their phytochemical composition. The oil of the fruit contained predominantly oleic acid (59%) and linoleic acid (29%). The total content of phenolic antioxidants in the whole fruits was 5.338 g/kg with 456 mg/kg (9%), 701 mg/kg (13%) and 4159 mg/kg (78%) detected in the peels, flesh and pits respectively. The peels contained solely 3,4-dihydroxybenzoic acid (270 mg/kg) and rutin (186 mg/kg), the flesh exclusively echinoids (723 mg/kg), whereas the pits contained a rich variety of phenolic compounds (4.2 g/kg) dominated by amygdalin (3.8 g/kg), but with significant contributions from vanillin (102 mg/kg), guajacyl-glycerin-coniferyl aldehyde isomers (87 mg/kg), dehydro-diconiferyl aldehyde (52 mg/kg), and vanillin diglucoside (48 mg/kg). Of the major phenolic compounds tested across a range of in vitro assays, rutin was the superior antioxidant.     

A mutation in the COX5 gene of the yeast Scheffersomyces stipitis alters utilization of amino acids as carbon source, ethanol formation and activity of cyanide insensitive respiration

Scheffersomyces stipitis PJH was mutagenized by random integrative mutagenesis and the integrants were screened for lacking the ability to grow with glutamate as sole carbon source. One of the two isolated mutants was damaged in the COX5 gene, which encodes a subunit of the cytochrome c oxidase. BLAST searches in the genome of Sc. stipitis revealed that only one singular COX5 gene exists in Sc. stipitis, in contrast to Saccharomyces cerevisiae, where two homologous genes are present. Mutant cells had lost the ability to grow with the amino acids glutamate, proline or aspartate and other non-fermentable carbon sources, such as acetic acid and ethanol, as sole carbon sources. Biomass formation of the mutant cells in medium containing glucose or xylose as carbon source was lower compared with the wild-type cells. However, yields and specific ethanol formation of the mutant were much higher, especially under conditions of higher aeration. The mutant cells lacked both cytochrome c oxidase activity and cyanide-sensitive respiration, whereas ADH and PDC activities were distinctly enhanced. SHAM-sensitive respiration was obviously essential for the fermentative metabolism, because SHAM completely abolished growth of the mutant cells with both glucose or xylose as carbon source.     

Development of an event-specific detection method for genetically modified rice Kefeng?6 by quantitative real-time PCR

The genetically modified (GM) rice Kefeng?6 has gained resistance against several rice pests by inserting the cpti and cry1Ac genes. As this transgenic line is not approved for import, processing and cultivation in the European Union (EU), sensitive and specific detection methods need to be available to monitor any illegal presence of Kefeng?6 in food products within the EU. The aim of this study was to develop and validate an event-specific detection method by means of quantitative real-time PCR (qPCR) for the detection of Kefeng?6 in foodstuff. A primer pair and hydrolysis probe were designed according to the right border junction sequence of the transgene. The qPCR assay was validated according to the ENGL/EURL-GMFF guidelines for GMO testing and is presented according to the MIQE guidelines. The in-house validation process resulted in a limit of detection of 5 DNA copies of the transgene with confidence intervals (95?%) between 0.07 and 0.52, a PCR efficiency of 105?% and a correlation coefficient (R ²) value of 0.9997. The specificity of the assay was tested by end-point PCR, gel electrophoresis and subsequent sequencing of the PCR products. By testing DNA of several GM and non-GM crops, cross reactivity of the assay was not observed. Further, 35 food products were analyzed for the presence of Kefeng?6 by means of the event-specific detection method. For 9 out of 35 samples, PCR products for Kefeng?6 DNA were observed.     

SUPRENUM: System essentials and grid applications

The SUPRENUM idea, the project, and the system has generally been described and presented in several papers. There is also a great deal of more detailed technical papers describing SUPRENUM as a whole or certain elements of it.

Here we want to give only a very general and rough survey on the essentials of the SUPRENUM system in order to enable the reader to categorize and understand the more specific SUPRENUM papers in this special issue.

Most of the supercomputer applications today are based on grid or grid-like data structures. Grid applications play also an essential role in the SUPRENUM development: in the top-down design of the architecture, in the programming environment, in the parallelization concept of algorithms, and, of course, in the application software development itself. We therefore place some emphasis on this grid orientation in our presentation.     

Comparison of Different Mass Spectrometry Workflows for the Proteomic Analysis of Tear Fluid

The tear film is a multi-layer fluid that covers the corneal and conjunctival epithelia of the eye and provides lubrication, nutrients, and protection from the outside environment. Tear fluid contains a high concentration of proteins and has thus been recognized as a potential source of biomarkers for ocular disorders due to its proximity to disease sites on the ocular surface and the non-invasive nature of its collection. This is particularly true in the case of dry eye disease, which directly impacts the tear film and its components. Proteomic analysis of tear fluid is challenging mainly due to the wide dynamic range of proteins and the small sample volumes. However, recent advancements in mass spectrometry have revolutionized the field of proteomics enabling unprecedented depth, speed, and accuracy, even with small sample volumes. In this study using the Orbitrap Fusion Tribrid mass spectrometer, we compared four different mass spectrometry workflows for the proteomic analysis of tear fluid collected via Schirmer strips. We were able to establish a method of in-strip protein digestion that identified >3000 proteins in human tear samples from 11 healthy subjects. Our method offers a significant improvement in the number of proteins identified compared to previously reported methods without pooling samples.     

疏水和超级疏水整理的新测试方法

目前基于全球化的世界经济形势迫使西欧工业在高品质领域更多地革新和发展,并把大量的廉价产品的生产向低工资国家转移.因此,高效能产品和高度发展的制造工艺在欧洲赢得了越来越重要的意义.于是,至今而论,进一步改善那些高品质产品,并根据情况尽量生产高价格产品仍然是正确的.     

Probabilistic performance prediction model for Austrian torrent control infrastructure

Due to the growing stock of torrent control structures and decreasing investments, the protection level can be reduced in the long term. Therefore, the focus of the future investments has been shifted on efficiency improvement and maintenance of existing structures. The maintenance of the existing structures is necessary to ensure safety from natural hazards, which are increasing as a consequence of the climate change. Due to the increasing number of structures, there is a strong need to develop a good maintenance management for these infrastructure works. This study is based on data from the condition rating programme of the Austrian Service for Torrent and Avalanche Control. For the structures relevant in this work, 75,343 records were available. The data were examined for different construction type and construction materials. The reliability of the structures was determined by means of the Markov chain. The study describes a homogeneous Markov chain model formed by the data of the condition rating. The result of this study is a proposal for a time to failure (TTF) and a time to repair (TTR) for several construction types with different construction materials as well as the time-dependent use of construction materials in the sector of the Austrian torrent control infrastructure.     

Supramolecular Assembly of Aminoethylene‐Lipopeptide PMO Conjugates into RNA Splice‐Switching Nanomicelles

Phosphorodiamidate morpholino oligomers (PMOs) are oligonucleotide analogs that can be used for therapeutic modulation of pre‐mRNA splicing. Similar to other classes of nucleic acid‐based therapeutics, PMOs require delivery systems for efficient transport to the intracellular target sites. Here, artificial peptides based on the oligo(ethylenamino) acid succinyl‐tetraethylenpentamine (Stp), hydrophobic modifications, and an azide group are presented, which are used for strain‐promoted azide‐alkyne cycloaddition conjugation with splice‐switching PMOs. By systematically varying the lead structure and formulation, it is determined that the type of contained fatty acid and supramolecular assembly have a critical impact on the delivery efficacy. A compound containing linolenic acid with three cis double bonds exhibits the highest splice‐switching activity and significantly increases functional protein expression in pLuc/705 reporter cells in vitro and after local administration in vivo. Structural and mechanistic studies reveal that the lipopeptide PMO conjugates form nanoparticles, which accelerate cellular uptake and that the content of unsaturated fatty acids enhances endosomal escape. In an in vitro Duchenne muscular dystrophy exon skipping model using H2K‐mdx52 dystrophic skeletal myotubes, the highly potent PMO conjugates mediate significant splice‐switching at very low nanomolar concentrations. The presented aminoethylene‐lipopeptides are thus a promising platform for the generation of PMO‐therapeutics with a favorable activity/toxicity profile.     

Verminderung des Gehaltes von Blei und anderen Elementen in Wein mit Hilfe von Pectins?ure

Zusammenfassung Der Bleigehalt von Wein kann durch Zusatz von Pectinsäure (PS) vermindert werden. Die Wirksamkeit der Bleiverminderung durch PS hängt von der Qualitätsstufe des Weines ab. In Auslesewein (Wein A) senkten 6250 mg PS/1 den Bleigehalt in 24 h von 0,88 mg/l auf 0,28 mg/l und in Spätlese (Wein B) von 0,83 mg/l auf 0,06 mg/1. Unter den gleichen Bedingungen nahm in Wein A der Gehalt an Fe, Zn und Cu von 8,85 mg/l auf 7,05 mg/1, von 4,75 mg/l auf 1,25 mg/l and von 0,67 mg/l auf 0.57 mg/l ab; bei Wein B reduzierte sich der Gehalt von Fe, Zn und Cu von 6,70 mg/l auf 5,41 mg/1, von 1,17 mg/l auf 0,28 mg/l und von 0,46 mg/l auf 0,28 mg/1. Durch Filtration des Weines wurde PS nahezu quantitativ entfernt. Eine geschmackliche Beeinträchtigung des Weines durch PS ist bei 750 mg and 1500 mg PS/1 nicht feststellbar, jedoch bei 6 250 mg PS/1 nicht auszuschließen. Aufgrund ihrer hohen Bindungsaffinität zu Blei scheint PS geeignet, Blei auch aus anderen flüssi-gen Lebensmitteln zu entfernen.

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Reduction of lead content and of other metals in wine by means of pectic acid

Summary A procedure for reducing the Pb content in wines containing high levels of Pb is described. The reduction of Pb by means of pectic acid (PA) depends on the quality grade of the wine. In Auslese (wine A) 6250 mg PA/l diminished Pb content in 24 h from 0.88 mg/l to 0.28 mg/1; in Spatlese (wine B) from 0.83 mg/l to 0.06 mg/1. Under the same conditions the content of Fe, Zn, Cu decreased in wine A from 8.85 mg/l to 7.05 mg/1, from 4.75 mg/l to 1.25 mg/1, from 0.67 mg/l to 0.57 mg/l and in wine B from 6.70 mg/l to 5.41 mg/1, from 1.17 mg/l to 0.28 mg, 0.46 mg/l to 0.28 mg/l, respectively. PA is removed almost quantitatively by filtration. Sensory properties of treated wines were unchanged with concentrations of PA of 750 mg and 1500 mg/l. A slight effect on taste at 6250 mg PA/l wine cannot be excluded. On account of its high affinity to Pb, PA will probably remove Pb from other liquid foods as well.