The Role of the PFNA Operon of Bifidobacteria in the Recognition of Host’s Immune Signals: Prospects for the Use of the FN3 Protein in the Treatment of COVID-19

Bifidobacteria are some of the major agents that shaped the immune system of many members of the animal kingdom during their evolution. Over recent years, the question of concrete mechanisms underlying the immunomodulatory properties of bifidobacteria has been addressed in both animal and human studies. A possible candidate for this role has been discovered recently. The PFNA cluster, consisting of five core genes, pkb2, fn3, aaa-atp, duf58, tgm, has been found in all gut-dwelling autochthonous bifidobacterial species of humans. The sensory region of the species-specific serine-threonine protein kinase (PKB2), the transmembrane region of the microbial transglutaminase (TGM), and the type-III fibronectin domain-containing protein (FN3) encoded by the I gene imply that the PFNA cluster might be implicated in the interaction between bacteria and the host immune system. Moreover, the FN3 protein encoded by one of the genes making up the PFNA cluster, contains domains and motifs of cytokine receptors capable of selectively binding TNF-α. The PFNA cluster could play an important role for sensing signals of the immune system. Among the practical implications of this finding is the creation of anti-inflammatory drugs aimed at alleviating cytokine storms, one of the dire consequences resulting from SARS-CoV-2 infection.     

Extended focus diffractive optical element for Gaussian laser beams

The depth of focus of the Gaussian beam is extended by introducing a wavefront phase correction with properly designed diffractive optical elements. Results of the computer simulations show that, compared with other methods, the presented method demonstrates a reduced focal spot size and low sidelobes in a focal domain, within a considerable range of defocusing distances. Experimental results for the visible range diffractive optical element with a focus of 40 mm and a depth of focus that extends to 1 mm agree with the theory.     

Light scattering on Chebyshev particles of higher order

We present what we believe to be the first results of a light-scattering analysis on several Chebyshev particles characterized by higher orders. Chebyshev particles of comparatively lower orders were used in the past to study the effects of nonspherical but concave geometries in remote sensing applications. We will show that, based on the developed methodology, accurate results can also be obtained for particles of higher orders exhibiting a more pronounced surface waviness. The achieved results demonstrate that higher-order Chebyshev particles can be used to estimate the influence of a weak surface roughness on the light-scattering behavior of the underlying smooth scatterer. The effects obtained correspond with the results of other approaches and with the theoretical expectations of a weak surface roughness. In contrast to what is known for regular particles, there can be observed an essential difference between the phase functions of the underlying spherical scatterer and the corresponding higher-order Chebyshev particle if a higher absorptivity of the scattering medium is considered. This paper demonstrates additionally that Chebyshev polynomials can be simply combined with smooth geometries other than spheres.     

Effect of oxide shell growth on nano-aluminum thermite propagation rates

Flame propagation rates for nanometric particle composites of aluminum (Al) and molybdenum trioxide (MoO₃) were examined. The Al particles were prepared by thermally treating the particles at 480 °C for time increments up to 180 min in oxygen and 90 min in argon. This treatment caused the aluminum passivation shell to grow and there is also evidence of shell damage due to treatment. Results reveal several interesting behaviors: flame speeds initially on the order of several hundred meters per second were reduced with damage to the oxide shell, and there is a weak dependence of the flame speed on the ratio of particle radius to shell thickness (M) in the range 6.1 < M < 13.4. The sharp drop in flame rate at further reduction in M down to 5.0 is consistent with a similar drop observed for adding alumina to the reactive mixture. All observations are consistent with the melt dispersion mechanism associated with Al nanoparticle oxidation.     

Temperature effect on non-stationary compressive loading response of polymethacrylimide solid foam

This paper presents the results of experimental investigation and modeling the polymethacrylimide (PMI) solid foam response on slightly non-stationary compressive loads at different loading speed and temperature. The PMI represents a typical material used as a core component of composite sandwich structures. For all conditions, the strain–stress curves exhibit three definite regions, such as linearly elastic, plateau, and densification as it is known from the literature. However, it is shown in the present study that even minor fluctuations of the loading speed may lead to significant qualitative effects within the plateau segment. In particular, spike-wise load drops occur in a regular way during the loading phase when the specimen temperature is below −20 °C. Acoustic emission tests lead to the conclusion that the load drops are associated with generation of brittle fractures in the clusters of broken foam cells. Also, cyclic loading tests were conducted to evaluate the energy loss in cells permanent deformation during the loading cycle. The amount of energy dissipated for each cycle is reduced at higher temperatures. Finally, based on the experimental results, a phenomenological model of the foam load–displacement response at different loading speeds and temperatures is presented in the form of a single analytical expression.     

The effect of pre-heating on flame propagation in nanocomposite thermites

Flame propagation in a confined tube configuration was evaluated for aluminum (Al) and molybdenum trioxide (MoO₃) thermites starting at room temperature and pre-heated up to 170 °C. Flame propagation was analyzed via high speed imaging diagnostics and temperatures were monitored with thermocouples. Experiments were performed in a semi-confined flame tube apparatus housed in a reaction chamber initially at standard atmospheric pressure. The flame propagation behavior for the nano-particle thermite was compared to micron particle thermite of the same composition. Results indicate that increasing the initial temperature of the reactants results in dramatically increased flame speeds for nanocomposite thermite (i.e., from 627 to 1002 m/s for ambient and 105 °C pre-heat temperature, respectively) and for micron composite thermite (i.e., from 205 to 347 m/s for ambient and 170 °C pre-heat temperature, respectively) samples. Experimental studies were extended giving a cooling time for the heated thermites prior to ignition and flame propagation. It is shown that when 105 °C and 170 °C pre-heated thermites are cooled at a rate of 0.06 K/s, almost the same flame speeds are obtained as thermites at ambient temperature. However, when the cooling rate is increased to 0.13 K/s, the measured flame speeds approach the flame speeds of pre-heated samples.     

Assessment of near-infrared path length in fibrous phantom and muscle tissue

The first derivative of the pseudo-absorption spectrum of a water-loaded cotton wool (water-CW) phantom, which mimics muscle tissues, was used to determine the light path length in the near-infrared (NIR) region. The light path length increased as the density of the turbid medium decreased. It is independent of both water content in the range of 75-85% (by weight) and the diffuse reflecting reference used to determine the pseudo-absorbance. The path length determination procedure was verified by measurements of diffuse reflectance in chicken breast tissue for which the path length of 1.8 mm (differential path length factor, DPF = 2.1) was found to be similar to the path length of NIR light of 1.5-2.2 mm (DPF = 1.8-2.6) in a water-CW phantom of density similar to chicken breast. We conclude that the NIR light path length can serve as a characteristic of muscle tissue density.     

Hydrothermal synthesis of TiO<Subscript>2</Subscript> nano-particles using novel water-soluble titanium complexes

Hydrothermal treatment of a series of water-soluble titanium complexes resulted in the formation of TiO₂. Rutile, anatase or a mixture of both can be synthesized by varying the ligands. The titania obtained was composed of nano-sized particles with large specific surface areas. These TiO₂ powders exhibited high photocatalytic activity for NO _x decomposition. In particular, they demonstrated higher activity than P25 (Degussa) under visible-light irradiation.     

Landscape phages and their fusion proteins targeted to breast cancer cells

Breast cancer is a leading cause of death among women in the USA. The efficacy of existing anticancer therapeutics can be improved by targeting them through conjugation with ligands binding to cellular receptors. Recently, we developed a novel drug targeting strategy based on the use of pre-selected cancer-specific 'fusion pVIII proteins' (fpVIII), as targeting ligands. To study the efficiency of this approach in animal models, we developed a panel of breast cancer cell-binding phages as a source of targeted fpVIIIs. Two landscape phage peptide libraries (8-mer f8/8 and 9-mer f8/9) were screened to isolate 132 phage variants that recognize breast carcinoma cells MCF-7 and ZR-75-1 and internalize into the cells. When tested for their interaction with the breast cancer cells in comparison with liver cancer cells HepG2, human mammary cells MCF-10A cells and serum, 16 of the phage probes selectively interacted with the breast cancer cells whereas 32 bound both breast and liver cancer cells. The most prominent cancer-specific phage DMPGTVLP, demonstrating sub-nanomolar Kd in interaction with target cells, was used for affinity chromatography of cellular membrane molecules to reveal its potential binding receptor. The isolated protein was identified by direct sequencing as cellular surface nucleolin. This conclusion was confirmed by inhibition of the phage-cell interaction with nucleolin antibodies. Other prominent phage binders VPTDTDYS, VEEGGYIAA, and DWRGDSMDS demonstrate consensus motifs common to previously identified cancer-specific peptides. Isolated phage proteins exhibit inherent binding specificity towards cancer cells, demonstrating the functional activity of the selected fused peptides. The selected phages, their peptide inserts and intact fusion proteins can serve as promising ligands for the development of targeted nanomedicines and their study in model mice with xenograft of human cells MCF-7 and ZR-75-1.